RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 IFFO1Q0D2I5 559 aa13.59□□□□□ -0.23
LINC00173-201ENST00000470091 CBLBQ13191 982 aa13.59□□□□□ -0.23
LINC00173-201ENST00000470091 C1orf61Q13536 156 aa13.59□□□□□ -0.23
LINC00173-201ENST00000470091 IHHQ14623 411 aa13.59□□□□□ -0.23
LINC00173-201ENST00000470091 PCSK7Q16549 785 aa13.59□□□□□ -0.23
LINC00173-201ENST00000470091 DEFB133Q30KQ1 61 aa13.59□□□□□ -0.23
LINC00173-201ENST00000470091 TBC1D25Q3MII6 688 aa13.59□□□□□ -0.23
LINC00173-201ENST00000470091 ZNF805Q5CZA5 627 aa13.59□□□□□ -0.23
LINC00173-201ENST00000470091 CEP85LQ5SZL2 805 aa13.59□□□□□ -0.23
LINC00173-201ENST00000470091 KYAT3Q6YP21 454 aaKnown RBP13.59□□□□□ -0.23
LINC00173-201ENST00000470091 ZNF548Q8NEK5 533 aaPredicted RBP13.59□□□□□ -0.23
LINC00173-201ENST00000470091 SNIP1Q8TAD8 396 aaKnown RBP13.59□□□□□ -0.23
LINC00173-201ENST00000470091 ARRDC2Q8TBH0 407 aa13.59□□□□□ -0.23
LINC00173-201ENST00000470091 FAM174AQ8TBP5 190 aa13.59□□□□□ -0.23
LINC00173-201ENST00000470091 IFI44Q8TCB0 444 aa13.59□□□□□ -0.23
LINC00173-201ENST00000470091 MAPK15Q8TD08 544 aa13.59□□□□□ -0.23
LINC00173-201ENST00000470091 SLC39A7Q92504 469 aa13.59□□□□□ -0.23
LINC00173-201ENST00000470091 ISG20Q96AZ6 181 aaKnown RBP13.59□□□□□ -0.23
LINC00173-201ENST00000470091 EXOC2Q96KP1 924 aa13.59□□□□□ -0.23
LINC00173-201ENST00000470091 KLF6Q99612 283 aaPredicted RBP13.59□□□□□ -0.23
LINC00173-201ENST00000470091 SEMA3CQ99985 751 aa13.59□□□□□ -0.23
LINC00173-201ENST00000470091 MGME1Q9BQP7 344 aa13.59□□□□□ -0.23
LINC00173-201ENST00000470091 POLR1EQ9GZS1 481 aaKnown RBP13.59□□□□□ -0.23
LINC00173-201ENST00000470091 SYBUQ9NX95 663 aa13.59□□□□□ -0.23
LINC00173-201ENST00000470091 LHX3Q9UBR4 397 aa13.59□□□□□ -0.23
LINC00173-201ENST00000470091 AAR2Q9Y312 384 aaKnown RBP13.59□□□□□ -0.23
LINC00173-201ENST00000470091 U3KQA8 63 aa13.59□□□□□ -0.23
LINC00173-201ENST00000470091 FLNBO75369 2602 aaKnown RBP13.59□□□□□ -0.23
LINC00173-201ENST00000470091 H3BM21 787 aa13.58□□□□□ -0.24
LINC00173-201ENST00000470091 TSPAN6O43657 245 aa13.58□□□□□ -0.24
LINC00173-201ENST00000470091 MMP20O60882 483 aa13.58□□□□□ -0.24
LINC00173-201ENST00000470091 AGTP01019 485 aa13.58□□□□□ -0.24
LINC00173-201ENST00000470091 ADRA1AP35348 466 aa13.58□□□□□ -0.24
LINC00173-201ENST00000470091 WNT3AP56704 352 aa13.58□□□□□ -0.24
LINC00173-201ENST00000470091 SNRPD1P62314 119 aaKnown RBP13.58□□□□□ -0.24
LINC00173-201ENST00000470091 GABREP78334 506 aa13.58□□□□□ -0.24
LINC00173-201ENST00000470091 EIF2B5Q13144 721 aaKnown RBP13.58□□□□□ -0.24
LINC00173-201ENST00000470091 MPP3Q13368 585 aa13.58□□□□□ -0.24
LINC00173-201ENST00000470091 CDCP2Q5VXM1 449 aa13.58□□□□□ -0.24
LINC00173-201ENST00000470091 ALG1LQ6GMV1 187 aa13.58□□□□□ -0.24
LINC00173-201ENST00000470091 CRTC1Q6UUV9 634 aa13.58□□□□□ -0.24
LINC00173-201ENST00000470091 EFL1Q7Z2Z2 1120 aaKnown RBP13.58□□□□□ -0.24
LINC00173-201ENST00000470091 MTERF4Q7Z6M4 381 aaKnown RBP13.58□□□□□ -0.24
LINC00173-201ENST00000470091 PARGQ86W56 976 aa13.58□□□□□ -0.24
LINC00173-201ENST00000470091 SPACA3Q8IXA5 215 aa13.58□□□□□ -0.24
LINC00173-201ENST00000470091 OR2AP1Q8NGE2 309 aa13.58□□□□□ -0.24
LINC00173-201ENST00000470091 TADA1Q96BN2 335 aa13.58□□□□□ -0.24
LINC00173-201ENST00000470091 MRGPRX2Q96LB1 330 aa13.58□□□□□ -0.24
LINC00173-201ENST00000470091 SIGLEC10Q96LC7 697 aa13.58□□□□□ -0.24
LINC00173-201ENST00000470091 LENG8Q96PV6 779 aaPredicted RBP13.58□□□□□ -0.24
LINC00173-201ENST00000470091 DEPDC7Q96QD5 511 aa13.58□□□□□ -0.24
LINC00173-201ENST00000470091 PSKH2Q96QS6 385 aa13.58□□□□□ -0.24
LINC00173-201ENST00000470091 TRIM56Q9BRZ2 755 aaKnown RBP13.58□□□□□ -0.24
LINC00173-201ENST00000470091 DUSP23Q9BVJ7 150 aa13.58□□□□□ -0.24
LINC00173-201ENST00000470091 TCEAL2Q9H3H9 227 aaPredicted RBP13.58□□□□□ -0.24
LINC00173-201ENST00000470091 HAUS2Q9NVX0 235 aa13.58□□□□□ -0.24
LINC00173-201ENST00000470091 MAD1L1Q9Y6D9 718 aa13.58□□□□□ -0.24
LINC00173-201ENST00000470091 A0A087WUV0 522 aaPredicted RBP13.57□□□□□ -0.24
LINC00173-201ENST00000470091 SMIM23A6NLE4 172 aa13.57□□□□□ -0.24
LINC00173-201ENST00000470091 AQP9O43315 295 aa13.57□□□□□ -0.24
LINC00173-201ENST00000470091 ZIC2O95409 532 aaPredicted RBP13.57□□□□□ -0.24
LINC00173-201ENST00000470091 NME1P15531 152 aaKnown RBP13.57□□□□□ -0.24
LINC00173-201ENST00000470091 SSTR1P30872 391 aa13.57□□□□□ -0.24
LINC00173-201ENST00000470091 THOP1P52888 689 aa13.57□□□□□ -0.24
LINC00173-201ENST00000470091 EIF3BP55884 814 aaKnown RBP13.57□□□□□ -0.24
LINC00173-201ENST00000470091 GEMIN4P57678 1058 aaKnown RBP13.57□□□□□ -0.24
LINC00173-201ENST00000470091 CXADRP78310 365 aa13.57□□□□□ -0.24
LINC00173-201ENST00000470091 TLE3Q04726 772 aa13.57□□□□□ -0.24
LINC00173-201ENST00000470091 TCEA2Q15560 299 aa13.57□□□□□ -0.24
LINC00173-201ENST00000470091 KRT71Q3SY84 523 aa13.57□□□□□ -0.24
LINC00173-201ENST00000470091 GUSBP11Q6P575 273 aa13.57□□□□□ -0.24
LINC00173-201ENST00000470091 GDPD4Q6W3E5 623 aa13.57□□□□□ -0.24
LINC00173-201ENST00000470091 GPR155Q7Z3F1 870 aa13.57□□□□□ -0.24
LINC00173-201ENST00000470091 KDELC2Q7Z4H8 507 aa13.57□□□□□ -0.24
LINC00173-201ENST00000470091 LINC00523Q86TU6 105 aa13.57□□□□□ -0.24
LINC00173-201ENST00000470091 PALM2Q8IXS6 379 aa13.57□□□□□ -0.24
LINC00173-201ENST00000470091 PLPP6Q8IY26 295 aa13.57□□□□□ -0.24
LINC00173-201ENST00000470091 RBFAQ8N0V3 343 aa13.57□□□□□ -0.24
LINC00173-201ENST00000470091 DNAAF3Q8N9W5 541 aa13.57□□□□□ -0.24
LINC00173-201ENST00000470091 FAM181AQ8N9Y4 354 aa13.57□□□□□ -0.24
LINC00173-201ENST00000470091 RAB7BQ96AH8 199 aa13.57□□□□□ -0.24
LINC00173-201ENST00000470091 LRRC39Q96DD0 335 aa13.57□□□□□ -0.24
LINC00173-201ENST00000470091 STAMBPL1Q96FJ0 436 aa13.57□□□□□ -0.24
LINC00173-201ENST00000470091 SH3GL2Q99962 352 aa13.57□□□□□ -0.24
LINC00173-201ENST00000470091 WRAP53Q9BUR4 548 aaKnown RBP13.57□□□□□ -0.24
LINC00173-201ENST00000470091 FSD1LQ9BXM9 530 aa13.57□□□□□ -0.24
LINC00173-201ENST00000470091 PLAC1Q9HBJ0 212 aa13.57□□□□□ -0.24
LINC00173-201ENST00000470091 GPR27Q9NS67 375 aa13.57□□□□□ -0.24
LINC00173-201ENST00000470091 EVA1BQ9NVM1 165 aa13.57□□□□□ -0.24
LINC00173-201ENST00000470091 FAM53CQ9NYF3 392 aa13.57□□□□□ -0.24
LINC00173-201ENST00000470091 ZC3H7BQ9UGR2 993 aaKnown RBP13.57□□□□□ -0.24
LINC00173-201ENST00000470091 SDR42E2A6NKP2 422 aa13.56□□□□□ -0.24
LINC00173-201ENST00000470091 SYF2O95926 243 aaKnown RBP13.56□□□□□ -0.24
LINC00173-201ENST00000470091 GSRP00390 522 aa13.56□□□□□ -0.24
LINC00173-201ENST00000470091 GP1BAP07359 652 aa13.56□□□□□ -0.24
LINC00173-201ENST00000470091 TIMP2P16035 220 aa13.56□□□□□ -0.24
LINC00173-201ENST00000470091 TSHRP16473 764 aa13.56□□□□□ -0.24
LINC00173-201ENST00000470091 TPH1P17752 444 aa13.56□□□□□ -0.24
LINC00173-201ENST00000470091 CR2P20023 1033 aa13.56□□□□□ -0.24
LINC00173-201ENST00000470091 CHRNA4P43681 627 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms