RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 WEE1P30291 646 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 CD97P48960 835 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 PRKAA2P54646 552 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 RHOAP61586 193 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 TIAL1Q01085 375 aaKnown RBP eCLIP9.38□□□□□ -0.91
TOP3A-203ENST00000469739 CDH18Q13634 790 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 CYTH1Q15438 398 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 POM121L1PQ3SYA9 428 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 VPS26BQ4G0F5 336 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 UNC50Q53HI1 259 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 FAM91A1Q658Y4 838 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 CCDC80Q76M96 950 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 DHDDSQ86SQ9 333 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 APCDD1Q8J025 514 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 BBS5Q8N3I7 341 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 BRSK1Q8TDC3 778 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 GSTO2Q9H4Y5 243 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 EGFL7Q9UHF1 273 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 PCDHGB4Q9UN71 923 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 PCDHGB5Q9Y5G0 923 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 MYO15AQ9UKN7 3530 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 KRT87PA6NCN2 255 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 TCAF2A6NFQ2 919 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 WASH4PA8MWX3 477 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 E5RI56 91 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 PSMD12O00232 456 aaPredicted RBP9.37□□□□□ -0.91
TOP3A-203ENST00000469739 PIP5K1BO14986 540 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 PRLP01236 227 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 CDK4P11802 303 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 CD1DP15813 335 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 CA5AP35218 305 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 ARF5P84085 180 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 PFKPQ01813 784 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 MED21Q13503 144 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 PTK2BQ14289 1009 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 RPS6KA2Q15349 733 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 FUT11Q495W5 492 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 VPS37AQ8NEZ2 397 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 HMGCLL1Q8TB92 370 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 EEF1AKMT1Q8WVE0 214 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 TSPAN17Q96FV3 270 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 UBXN10Q96LJ8 280 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 RTKNQ9BST9 563 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 GPR63Q9BZJ6 419 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 EPB41L1Q9H4G0 881 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 ARNT2Q9HBZ2 717 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 ZBTB26Q9HCK0 441 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 SORCS3Q9UPU3 1222 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 YIPF1Q9Y548 306 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 TRIM43BA6NCK2 446 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 CCDC160A6NGH7 325 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 H7C4K7 107 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 PEX1O43933 1283 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 CLASP2O75122 1294 aaKnown RBP9.37□□□□□ -0.91
TOP3A-203ENST00000469739 CDK14O94921 469 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 FGF1P05230 155 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 RBP1P09455 135 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 IDO1P14902 403 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 ZNF37AP17032 561 aaPredicted RBP9.37□□□□□ -0.91
TOP3A-203ENST00000469739 CSKP41240 450 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 VEGFBP49765 207 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 DIO3P55073 304 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 DCTN2Q13561 401 aaKnown RBP9.37□□□□□ -0.91
TOP3A-203ENST00000469739 NRF1Q16656 503 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 AAK1Q2M2I8 961 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 SDR16C5Q8N3Y7 309 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 TEX26Q8N6G2 289 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 RDH11Q8TC12 318 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 PTCD2Q8WV60 388 aaKnown RBP9.37□□□□□ -0.91
TOP3A-203ENST00000469739 ATP6V1E2Q96A05 226 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 VPS33AQ96AX1 596 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 IGSF21Q96ID5 467 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 BOCQ9BWV1 1114 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 APOL5Q9BWW9 433 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 C1orf21Q9H246 121 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 STN1Q9H668 368 aaKnown RBP9.37□□□□□ -0.91
TOP3A-203ENST00000469739 AKTIPQ9H8T0 292 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 EFCAB1Q9HAE3 211 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 ZNF334Q9HCZ1 680 aaPredicted RBP9.37□□□□□ -0.91
TOP3A-203ENST00000469739 INIPQ9NRY2 104 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 SUN2Q9UH99 717 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 AFF4Q9UHB7 1163 aaKnown RBP9.37□□□□□ -0.91
TOP3A-203ENST00000469739 DNAJC15Q9Y5T4 150 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 CPQQ9Y646 472 aa9.37□□□□□ -0.91
TOP3A-203ENST00000469739 H3BNC9 293 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 INPPL1O15357 1258 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 TRIM16O95361 564 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 IGLV3-27P01718 113 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 COL6A2P12110 1019 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 HLA-DPA1P20036 260 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 GGT5P36269 586 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 STK19P49842 368 aaPredicted RBP9.36□□□□□ -0.91
TOP3A-203ENST00000469739 STC1P52823 247 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 MTTPP55157 894 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 YBEYP58557 167 aaPredicted RBP9.36□□□□□ -0.91
TOP3A-203ENST00000469739 VAC14Q08AM6 782 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 GK3PQ14409 553 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 ACAP2Q15057 778 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 RBBP7Q16576 425 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 SGO1Q5FBB7 561 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms