RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 ARL5AQ9Y689 179 aa9.64□□□□□ -0.87
SRRT-208ENST00000469602 GLYATL1P3A0A0U1RQE8 302 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 ERI2A8K979 691 aaKnown RBP9.63□□□□□ -0.87
SRRT-208ENST00000469602 C1QTNF9BB2RNN3 333 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 B4DGG1 531 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 GPR89AB7ZAQ6 455 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 STX7O15400 261 aaKnown RBP9.63□□□□□ -0.87
SRRT-208ENST00000469602 PSMD3O43242 534 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 NUAK1O60285 661 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 NOBOXO60393 691 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 DNAJC6O75061 913 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 CRTAMO95727 393 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 AP2A1O95782 977 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 C1QTNF9P0C862 333 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 GPR89BP0CG08 455 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 JUPP14923 745 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 ZNF8P17098 575 aaPredicted RBP9.63□□□□□ -0.87
SRRT-208ENST00000469602 LPOP22079 712 aaPredicted RBP9.63□□□□□ -0.87
SRRT-208ENST00000469602 MSNP26038 577 aaKnown RBP9.63□□□□□ -0.87
SRRT-208ENST00000469602 AK4P27144 223 aaPredicted RBP9.63□□□□□ -0.87
SRRT-208ENST00000469602 ACTN2P35609 894 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 PDE1BQ01064 536 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 GSE1Q14687 1217 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 C14orf28Q4W4Y0 310 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 PERM1Q5SV97 790 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 CERCAMQ5T4B2 595 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 ZNF648Q5T619 568 aaPredicted RBP9.63□□□□□ -0.87
SRRT-208ENST00000469602 CDCP2Q5VXM1 449 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 SLC30A9Q6PML9 568 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 FAM151BQ6UXP7 276 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 UNQ6494/PRO21346Q6UXR6 183 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 ADGRG6Q86SQ4 1221 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 MARCH9Q86YJ5 346 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 SFTPA2Q8IWL1 248 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 CACTIN-AS1Q8N1I8 211 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 DCBLD1Q8N8Z6 715 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 CCDC89Q8N998 374 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 OR4K2Q8NGD2 314 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 OR6C4Q8NGE1 309 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 ZDHHC1Q8WTX9 485 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 PBKQ96KB5 322 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 ARFGAP3Q9NP61 516 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 HOMER3Q9NSC5 361 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 TRMT1Q9NXH9 659 aaKnown RBP9.63□□□□□ -0.87
SRRT-208ENST00000469602 TMPRSS11EQ9UL52 423 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 CLCA2Q9UQC9 943 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 DRG1Q9Y295 367 aaKnown RBP9.63□□□□□ -0.87
SRRT-208ENST00000469602 PRKAB1Q9Y478 270 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 PLEKHM1Q9Y4G2 1056 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 PCYT1BQ9Y5K3 369 aaPredicted RBP9.63□□□□□ -0.87
SRRT-208ENST00000469602 CACNA1BQ00975 2339 aa9.63□□□□□ -0.87
SRRT-208ENST00000469602 KIF26BQ2KJY2 2108 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 GAPDHSO14556 408 aaPredicted RBP9.62□□□□□ -0.87
SRRT-208ENST00000469602 CHUKO15111 745 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 GPR39O43194 453 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 GRID2O43424 1007 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 LDB2O43679 373 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 VEGFDO43915 354 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 MTX2O75431 263 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 SUN1O94901 812 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 MT-CO3P00414 261 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 PROS1P07225 676 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 ACP5P13686 325 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 ETS1P14921 441 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 GLB1P16278 677 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 FDFT1P37268 417 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 ACTR1BP42025 376 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 ZNF140P52738 457 aaPredicted RBP9.62□□□□□ -0.87
SRRT-208ENST00000469602 ACTR1AP61163 376 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 TARDBPQ13148 414 aaKnown RBP eCLIP9.62□□□□□ -0.87
SRRT-208ENST00000469602 CAMK2BQ13554 666 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 ITGA9Q13797 1035 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 HLTFQ14527 1009 aaKnown RBP eCLIP9.62□□□□□ -0.87
SRRT-208ENST00000469602 PTPRCAPQ14761 206 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 CHRNA6Q15825 494 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 KHDC1Q4VXA5 237 aaKnown RBP9.62□□□□□ -0.87
SRRT-208ENST00000469602 CHST15Q7LFX5 561 aaPredicted RBP9.62□□□□□ -0.87
SRRT-208ENST00000469602 GSTA5Q7RTV2 222 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 PRUNE1Q86TP1 453 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 LINC00523Q86TU6 105 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 C17orf82Q86X59 251 aaPredicted RBP9.62□□□□□ -0.87
SRRT-208ENST00000469602 SLC35F6Q8N357 371 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 RASGEF1CQ8N431 466 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 PRELID2Q8N945 189 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 GLIS1Q8NBF1 620 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 CCDC74AQ96AQ1 378 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 C19orf43Q9BQ61 176 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 CCDC3Q9BQI4 270 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 ETNK1Q9HBU6 452 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 RAB6BQ9NRW1 208 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 SMOXQ9NWM0 555 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 PAK5Q9P286 719 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 RABGEF1Q9UJ41 708 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 APPL1Q9UKG1 709 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 TTC7AQ9ULT0 858 aaPredicted RBP9.62□□□□□ -0.87
SRRT-208ENST00000469602 KCTD3Q9Y597 815 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 CHD6Q8TD26 2715 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 PIKFYVEQ9Y2I7 2098 aa9.62□□□□□ -0.87
SRRT-208ENST00000469602 TMEM8BA6NDV4 472 aa9.61□□□□□ -0.87
SRRT-208ENST00000469602 USP27XA6NNY8 438 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms