RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 KRT2P35908 639 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 NUDT1P36639 197 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 RXRGP48443 463 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 HARS2P49590 506 aaKnown RBP4.88□□□□□ -1.63
VPS8-219ENST00000469479 LIG4P49917 911 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 DUSP3P51452 185 aaPredicted RBP4.88□□□□□ -1.63
VPS8-219ENST00000469479 CDH8P55286 799 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 MC2RQ01718 297 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 OVGP1Q12889 678 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 DNAJC3Q13217 504 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 TUBB3Q13509 450 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 SFMBT2Q5VUG0 894 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 JADE1Q6IE81 842 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 KDM7AQ6ZMT4 941 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 SLC29A4Q7RTT9 530 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 GALNT16Q8N428 558 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 EID2Q8N6I1 236 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 LRRC52Q8N7C0 313 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 EXD3Q8N9H8 876 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 TMEM161BQ8NDZ6 487 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 FKBP10Q96AY3 582 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 BIRC7Q96CA5 298 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 MFSD3Q96ES6 412 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 ZNF274Q96GC6 653 aaPredicted RBP4.88□□□□□ -1.63
VPS8-219ENST00000469479 VCPIP1Q96JH7 1222 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 MARK4Q96L34 752 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 BBS2Q9BXC9 721 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 SLC25A18Q9H1K4 315 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 ZDHHC4Q9NPG8 344 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 DDX43Q9NXZ2 648 aaKnown RBP4.88□□□□□ -1.63
VPS8-219ENST00000469479 DPP3Q9NY33 737 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 TUBD1Q9UJT1 453 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 ANAPC2Q9UJX6 822 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 LSM7Q9UK45 103 aaKnown RBP4.88□□□□□ -1.63
VPS8-219ENST00000469479 GTF3C4Q9UKN8 822 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 DNM3Q9UQ16 869 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 PCDHGA8Q9Y5G5 932 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 CITO14578 2027 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 ANTXRLA6NF34 631 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 LRRC72A6NJI9 287 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 KCNJ18B7U540 433 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 NEDD8-MDP1E9PL57 170 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 SOCS2O14508 198 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 SLC16A4O15374 487 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 TRIAP1O43715 76 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 USP12O75317 370 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 DNTTP04053 509 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 RPS6KB1P23443 525 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 CCT6AP40227 531 aaKnown RBP4.87□□□□□ -1.63
VPS8-219ENST00000469479 ZXDBP98169 803 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 SPAG1Q07617 926 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 ADCK5Q3MIX3 580 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 HECTD3Q5T447 861 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 SDHAF4Q5VUM1 108 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 SNX30Q5VWJ9 437 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 SERPINA13PQ6UXR4 307 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 IQCHQ86VS3 1027 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 TMEM25Q86YD3 366 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 GATAD2AQ86YP4 633 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 PDCL2Q8N4E4 241 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 OR2T3Q8NH03 318 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 ZNF564Q8TBZ8 553 aaPredicted RBP4.87□□□□□ -1.63
VPS8-219ENST00000469479 ZBTB45Q96K62 511 aaPredicted RBP4.87□□□□□ -1.63
VPS8-219ENST00000469479 C8orf48Q96LL4 319 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 JAKMIP1Q96N16 626 aaKnown RBP4.87□□□□□ -1.63
VPS8-219ENST00000469479 KLHL32Q96NJ5 620 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 SLC46A1Q96NT5 459 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 ACOX2Q99424 681 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 PKMYT1Q99640 499 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 C7orf25Q9BPX7 421 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 MSTO1Q9BUK6 570 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 SLC2A11Q9BYW1 496 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 ELOVL4Q9GZR5 314 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 NACA2Q9H009 215 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 ABCG4Q9H172 646 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 LHX5Q9H2C1 402 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 IFT22Q9H7X7 185 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 TMLHEQ9NVH6 421 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 GEMIN8Q9NWZ8 242 aaKnown RBP4.87□□□□□ -1.63
VPS8-219ENST00000469479 COMMD8Q9NX08 183 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 GDAP2Q9NXN4 497 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 JKAMPQ9P055 326 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 SEPT10Q9P0V9 454 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 THAP10Q9P2Z0 257 aaPredicted RBP4.87□□□□□ -1.63
VPS8-219ENST00000469479 PLEKHB1Q9UF11 243 aaPredicted RBP4.87□□□□□ -1.63
VPS8-219ENST00000469479 CPSF3Q9UKF6 684 aaKnown RBP4.87□□□□□ -1.63
VPS8-219ENST00000469479 CDH9Q9ULB4 789 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 KCNJ14Q9UNX9 436 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 NCKAP1Q9Y2A7 1128 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 TMA7Q9Y2S6 64 aaKnown RBP4.87□□□□□ -1.63
VPS8-219ENST00000469479 RAD54BQ9Y620 910 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 PTPRJQ12913 1337 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 DENND4CQ5VZ89 1909 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 CEP192Q8TEP8 1941 aa4.87□□□□□ -1.63
VPS8-219ENST00000469479 ZNF638Q14966 1978 aaKnown RBP4.87□□□□□ -1.63
VPS8-219ENST00000469479 A0A1W2PPC4 97 aa4.86□□□□□ -1.63
VPS8-219ENST00000469479 TLDC2A0PJX2 215 aa4.86□□□□□ -1.63
VPS8-219ENST00000469479 CDRT15L2A8MXV6 281 aa4.86□□□□□ -1.63
VPS8-219ENST00000469479 F5H697 171 aa4.86□□□□□ -1.63
VPS8-219ENST00000469479 GABRDO14764 452 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms