RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 UBXN7O94888 489 aa12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 DDAH2O95865 285 aa12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 TRBC1P01850 177 aa12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 FGF5P12034 268 aa12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 MIPP30301 263 aa12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 MMP13P45452 471 aa12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 LEPRP48357 1165 aaKnown RBP12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 PGDP52209 483 aa12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 ZNF135P52742 658 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 KRT31Q15323 416 aa12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 MARC1Q5VT66 337 aa12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 PSTKQ8IV42 348 aaKnown RBP12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 AVL9Q8NBF6 648 aa12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 CT55Q8WUE5 264 aa12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 PLEKHG4BQ96PX9 1271 aa12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 ZWILCHQ9H900 591 aa12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 RMI1Q9H9A7 625 aa12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 UCK1Q9HA47 277 aa12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 LHX9Q9NQ69 397 aa12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 PARVAQ9NVD7 372 aa12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 ETNK2Q9NVF9 386 aa12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 TAS2R14Q9NYV8 317 aa12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 SLC30A1Q9Y6M5 507 aa12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 SHANK1Q9Y566 2161 aa12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 ABCA12Q86UK0 2595 aa12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 FADS2P1A8MWK0 482 aa12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 TCP11X1B4DZS4 312 aa12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 C21orf140B9A014 251 aa12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 GRID2O43424 1007 aa12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 RASSF9O75901 435 aa12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 RNF8O76064 485 aa12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 AMD1P17707 334 aa12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 AMPD1P23109 780 aa12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 DCTP40126 519 aa12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 UBE2HP62256 183 aa12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 MRPL49Q13405 166 aaKnown RBP12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 EIF2S3LQ2VIR3 472 aaKnown RBP12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 FKBP15Q5T1M5 1219 aa12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 CPZQ66K79 652 aa12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 PLEKHA7Q6IQ23 1121 aa12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 TMCO3Q6UWJ1 677 aa12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 TMEM26Q6ZUK4 368 aa12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 MAMDC2Q7Z304 686 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 PPP1R3BQ86XI6 285 aa12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 PHYKPLQ8IUZ5 450 aa12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 ATPAF2Q8N5M1 289 aa12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 NSMCE1Q8WV22 266 aa12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 WDR24Q96S15 920 aa12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 RUFY1Q96T51 708 aa12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 SLC25A23Q9BV35 468 aa12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 TRIM7Q9C029 511 aa12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 ACTL8Q9H568 366 aa12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 MLXIPLQ9NP71 852 aa12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 NT5MQ9NPB1 228 aa12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 SCHIP1Q9P0W5 487 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 PCDHGA9Q9Y5G4 932 aaKnown RBP12.65□□□□□ -0.38
TRAPPC12-216ENST00000469400 TNRC6AQ8NDV7 1962 aaKnown RBP12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 TMEM191CA6NGB0 347 aa12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 H3BRJ5 948 aa12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 ATMINO43313 823 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 KIF1CO43896 1103 aaKnown RBP12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 NUAK1O60285 661 aa12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 TIAF1O95411 115 aa12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 CLDN7O95471 211 aa12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 CLDN1O95832 211 aa12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 MT-ND3P03897 115 aa12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 XRCC1P18887 633 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 CCL11P51671 97 aa12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 CLCNKAP51800 687 aa12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 EPHB1P54762 984 aa12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 CDH6P55285 790 aa12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 CHAF1BQ13112 559 aa12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 IHHQ14623 411 aa12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 INPP5JQ15735 1006 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 UGT8Q16880 541 aa12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 PRR30Q53SZ7 412 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 HENMT1Q5T8I9 393 aaKnown RBP12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 PAPD7Q5XG87 772 aaKnown RBP12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 PRSS42Q7Z5A4 293 aa12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 RAVER1Q8IY67 606 aaKnown RBP12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 AOPEPQ8N6M6 819 aa12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 THAP4Q8WY91 577 aa12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 BRD8Q9H0E9 1235 aa12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 AKIRIN1Q9H9L7 192 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 KLC4Q9NSK0 619 aa12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 ATXN10Q9UBB4 475 aa12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 MED13Q9UHV7 2174 aa12.64□□□□□ -0.39
TRAPPC12-216ENST00000469400 TMCO5BA8MYB1 307 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 LRCH4O75427 683 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 PRLP01236 227 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 VIPP01282 170 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 TPM2P07951 284 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 ZNF8P17098 575 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 PTPN4P29074 926 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 ARL4AP40617 200 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 SLC19A1P41440 591 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 SPINT3P49223 89 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 RPS18P62269 152 aaKnown RBP12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 ITKQ08881 620 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms