RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 TMEM200CA6NKL6 621 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 RHPN2P1A8MT19 583 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 NEMP1O14524 444 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 RAD51BO15315 384 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 LRRTM2O43300 516 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 GRID2O43424 1007 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 DLX3O60479 287 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 MAFKO60675 156 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 KATNA1O75449 491 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 KLHL18O94889 574 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 ZBED1O96006 694 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 LTFP02788 710 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 COL6A2P12110 1019 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 CHRNA3P32297 505 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 STK19P49842 368 aaPredicted RBP5.89□□□□□ -1.47
NCL-208ENST00000466274 PEX5P50542 639 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 NEK3P51956 506 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 LIMK2P53671 638 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 AP3M2P53677 418 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 CDK18Q07002 472 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 BIRC3Q13489 604 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 PSMD6Q15008 389 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 DLG2Q15700 870 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 CHRNA6Q15825 494 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 IL17AQ16552 155 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 PRR30Q53SZ7 412 aaPredicted RBP5.89□□□□□ -1.47
NCL-208ENST00000466274 FSCBQ5H9T9 825 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 VASNQ6EMK4 673 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 SCARA5Q6ZMJ2 495 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 MMS22LQ6ZRQ5 1243 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 SFR1Q86XK3 245 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 CBWD2Q8IUF1 395 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 TRIM48Q8IWZ4 208 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 DTX3Q8N9I9 347 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 CHDHQ8NE62 594 aaPredicted RBP5.89□□□□□ -1.47
NCL-208ENST00000466274 OR4D9Q8NGE8 314 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 KIAA1524Q8TCG1 905 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 RAD54LQ92698 747 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 CCDC127Q96BQ5 260 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 CENPTQ96BT3 561 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 RTP4Q96DX8 246 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 AK8Q96MA6 479 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 IPO9Q96P70 1041 aaKnown RBP5.89□□□□□ -1.47
NCL-208ENST00000466274 STRA6Q9BX79 667 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 TWSG1Q9GZX9 223 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 TCEAL2Q9H3H9 227 aaPredicted RBP5.89□□□□□ -1.47
NCL-208ENST00000466274 RDH14Q9HBH5 336 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 ACSS2Q9NR19 701 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 ABCC13Q9NSE7 274 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 SFMBT1Q9UHJ3 866 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 ADAM29Q9UKF5 820 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 RPS6KL1Q9Y6S9 549 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 PLXNA2O75051 1894 aa5.89□□□□□ -1.47
NCL-208ENST00000466274 IGLON5A6NGN9 336 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 EPB41L2O43491 1005 aaKnown RBP5.88□□□□□ -1.47
NCL-208ENST00000466274 TSPAN6O43657 245 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 AP1G1O43747 822 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 STK17BO94768 372 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 TNFP01375 233 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 RPN1P04843 607 aaKnown RBP5.88□□□□□ -1.47
NCL-208ENST00000466274 NFKBIAP25963 317 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 ALDH4A1P30038 563 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 DLSTP36957 453 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 GPR3P46089 330 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 GLRBP48167 497 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 PLK1P53350 603 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 RPS24P62847 133 aaKnown RBP5.88□□□□□ -1.47
NCL-208ENST00000466274 B4GALNT1Q00973 533 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 GUCY1B3Q02153 619 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 MAP4K2Q12851 820 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 SNRNP35Q16560 246 aaKnown RBP5.88□□□□□ -1.47
NCL-208ENST00000466274 SGSM1Q2NKQ1 1148 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 FAM133BQ5BKY9 247 aaKnown RBP5.88□□□□□ -1.47
NCL-208ENST00000466274 PAPD7Q5XG87 772 aaKnown RBP5.88□□□□□ -1.47
NCL-208ENST00000466274 ANKS6Q68DC2 871 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 PM20D1Q6GTS8 502 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 TAF8Q7Z7C8 310 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 XYLT1Q86Y38 959 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 APCDD1Q8J025 514 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 FAM46DQ8NEK8 389 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 Q8TCH9 128 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 TAF4BQ92750 862 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 RAB7BQ96AH8 199 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 SNRNP40Q96DI7 357 aaKnown RBP5.88□□□□□ -1.47
NCL-208ENST00000466274 GNRHR2Q96P88 292 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 MLXIPLQ9NP71 852 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 AGPAT4Q9NRZ5 378 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 TCAF1Q9Y4C2 921 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 TMEM184BQ9Y519 407 aaPredicted RBP5.88□□□□□ -1.47
NCL-208ENST00000466274 CCDC168Q8NDH2 2452 aa5.88□□□□□ -1.47
NCL-208ENST00000466274 CSMD2Q7Z408 3487 aa5.87□□□□□ -1.47
NCL-208ENST00000466274 ZSCAN5CA6NGD5 496 aaPredicted RBP5.87□□□□□ -1.47
NCL-208ENST00000466274 KRT86O43790 486 aa5.87□□□□□ -1.47
NCL-208ENST00000466274 EIF5BO60841 1220 aaKnown RBP5.87□□□□□ -1.47
NCL-208ENST00000466274 ZG16O60844 167 aa5.87□□□□□ -1.47
NCL-208ENST00000466274 CREG1O75629 220 aa5.87□□□□□ -1.47
NCL-208ENST00000466274 CNOT4O95628 575 aaKnown RBP5.87□□□□□ -1.47
NCL-208ENST00000466274 THRAP10827 490 aa5.87□□□□□ -1.47
NCL-208ENST00000466274 ADRB3P13945 408 aa5.87□□□□□ -1.47
NCL-208ENST00000466274 PDGFRAP16234 1089 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms