RNA–Protein interactions for RNA: ENST00000465768.1

SAMM50-202, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 169 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-202ENST00000465768 GKAP1Q5VSY0 366 aaPredicted RBP3.88□□□□□ -1.79
SAMM50-202ENST00000465768 ANKRD54Q6NXT1 300 aa3.88□□□□□ -1.79
SAMM50-202ENST00000465768 C16orf54Q6UWD8 224 aa3.88□□□□□ -1.79
SAMM50-202ENST00000465768 SEPT14Q6ZU15 432 aa3.88□□□□□ -1.79
SAMM50-202ENST00000465768 CHST9Q7L1S5 443 aa3.88□□□□□ -1.79
SAMM50-202ENST00000465768 IRF2BP2Q7Z5L9 587 aa3.88□□□□□ -1.79
SAMM50-202ENST00000465768 TECPR1Q7Z6L1 1165 aa3.88□□□□□ -1.79
SAMM50-202ENST00000465768 TICAM1Q8IUC6 712 aa3.88□□□□□ -1.79
SAMM50-202ENST00000465768 AADATQ8N5Z0 425 aa3.88□□□□□ -1.79
SAMM50-202ENST00000465768 MIGA1Q8NAN2 632 aa3.88□□□□□ -1.79
SAMM50-202ENST00000465768 PPP1R13BQ96KQ4 1090 aa3.88□□□□□ -1.79
SAMM50-202ENST00000465768 ZNF48Q96MX3 618 aaPredicted RBP3.88□□□□□ -1.79
SAMM50-202ENST00000465768 ZNF570Q96NI8 536 aa3.88□□□□□ -1.79
SAMM50-202ENST00000465768 FAM234AQ9H0X4 552 aa3.88□□□□□ -1.79
SAMM50-202ENST00000465768 RBM38Q9H0Z9 239 aaKnown RBP3.88□□□□□ -1.79
SAMM50-202ENST00000465768 TMX4Q9H1E5 349 aaPredicted RBP3.88□□□□□ -1.79
SAMM50-202ENST00000465768 RANGRFQ9HD47 186 aaPredicted RBP3.88□□□□□ -1.79
SAMM50-202ENST00000465768 OR6C3Q9NZP0 311 aa3.88□□□□□ -1.79
SAMM50-202ENST00000465768 ADD3Q9UEY8 706 aaKnown RBP3.88□□□□□ -1.79
SAMM50-202ENST00000465768 CNOT8Q9UFF9 292 aaKnown RBP3.88□□□□□ -1.79
SAMM50-202ENST00000465768 FZD10Q9ULW2 581 aa3.88□□□□□ -1.79
SAMM50-202ENST00000465768 ERVK-11Q9UQG0 969 aa3.88□□□□□ -1.79
SAMM50-202ENST00000465768 SESN1Q9Y6P5 492 aa3.88□□□□□ -1.79
SAMM50-202ENST00000465768 MAU2Q9Y6X3 613 aa3.88□□□□□ -1.79
SAMM50-202ENST00000465768 IGSF1Q8N6C5 1336 aa3.88□□□□□ -1.79
SAMM50-202ENST00000465768 SBF2Q86WG5 1849 aa3.88□□□□□ -1.79
SAMM50-202ENST00000465768 PARD3Q8TEW0 1356 aa3.88□□□□□ -1.79
SAMM50-202ENST00000465768 NCAPD2Q15021 1401 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 TNS2Q63HR2 1409 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 SMG6Q86US8 1419 aaKnown RBP3.87□□□□□ -1.79
SAMM50-202ENST00000465768 MEGF6O75095 1541 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 IKBKBO14920 756 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 ITM2AO43736 263 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 AHCYL1O43865 530 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 TSPAN9O75954 239 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 PORP16435 677 aaPredicted RBP3.87□□□□□ -1.79
SAMM50-202ENST00000465768 DDX5P17844 614 aaKnown RBP3.87□□□□□ -1.79
SAMM50-202ENST00000465768 GABRB1P18505 474 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 MCM3P25205 808 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 HOXA13P31271 388 aaPredicted RBP3.87□□□□□ -1.79
SAMM50-202ENST00000465768 NUDT6P53370 316 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 CDH8P55286 799 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 SORDQ00796 357 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 EPS8Q12929 822 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 CHAF1BQ13112 559 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 NEDD9Q14511 834 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 C2orf68Q2NKX9 166 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 PCGF3Q3KNV8 242 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 MMEL1Q495T6 779 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 CDONQ4KMG0 1287 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 FSCBQ5H9T9 825 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 FNBP1LQ5T0N5 605 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 PQLC2Q6ZP29 291 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 DPPA4Q7L190 304 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 SHFQ7M4L6 423 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 HAPLN4Q86UW8 402 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 RNF168Q8IYW5 571 aaPredicted RBP3.87□□□□□ -1.79
SAMM50-202ENST00000465768 SRBD1Q8N5C6 995 aaKnown RBP3.87□□□□□ -1.79
SAMM50-202ENST00000465768 Q8N9P0 234 aaPredicted RBP3.87□□□□□ -1.79
SAMM50-202ENST00000465768 RRNAD1Q96FB5 475 aaKnown RBP3.87□□□□□ -1.79
SAMM50-202ENST00000465768 CCDC34Q96HJ3 373 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 SEPT5Q99719 369 aaPredicted RBP3.87□□□□□ -1.79
SAMM50-202ENST00000465768 NUDT16L1Q9BRJ7 211 aaKnown RBP3.87□□□□□ -1.79
SAMM50-202ENST00000465768 DCLK3Q9C098 648 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 FTOQ9C0B1 505 aaKnown RBP eCLIP3.87□□□□□ -1.79
SAMM50-202ENST00000465768 LTB4R2Q9NPC1 389 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 ZNF521Q96K83 1311 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 PCDH11XQ9BZA7 1347 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 PCDH11YQ9BZA8 1340 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 LRRC37A3O60309 1634 aa3.87□□□□□ -1.79
SAMM50-202ENST00000465768 FAM208AQ9UK61 1670 aaKnown RBP3.87□□□□□ -1.79
SAMM50-202ENST00000465768 hCG_1807616A0A1W2PRN6 198 aa3.86□□□□□ -1.79
SAMM50-202ENST00000465768 ERVV-2B6SEH9 535 aa3.86□□□□□ -1.79
SAMM50-202ENST00000465768 INAFM1C9JVW0 142 aa3.86□□□□□ -1.79
SAMM50-202ENST00000465768 H3BNX3 289 aa3.86□□□□□ -1.79
SAMM50-202ENST00000465768 J3KR12 359 aa3.86□□□□□ -1.79
SAMM50-202ENST00000465768 ASAP2O43150 1006 aa3.86□□□□□ -1.79
SAMM50-202ENST00000465768 DAB1O75553 588 aa3.86□□□□□ -1.79
SAMM50-202ENST00000465768 CYC1P08574 325 aa3.86□□□□□ -1.79
SAMM50-202ENST00000465768 HMOX1P09601 288 aa3.86□□□□□ -1.79
SAMM50-202ENST00000465768 CSH1P0DML2 217 aa3.86□□□□□ -1.79
SAMM50-202ENST00000465768 CSH2P0DML3 217 aa3.86□□□□□ -1.79
SAMM50-202ENST00000465768 PPP2R1AP30153 589 aa3.86□□□□□ -1.79
SAMM50-202ENST00000465768 HNRNPH1P31943 449 aaKnown RBP3.86□□□□□ -1.79
SAMM50-202ENST00000465768 PIGAP37287 484 aa3.86□□□□□ -1.79
SAMM50-202ENST00000465768 AMTP48728 403 aa3.86□□□□□ -1.79
SAMM50-202ENST00000465768 METAP2P50579 478 aaKnown RBP eCLIP3.86□□□□□ -1.79
SAMM50-202ENST00000465768 PGGT1BP53609 377 aa3.86□□□□□ -1.79
SAMM50-202ENST00000465768 TFAP4Q01664 338 aa3.86□□□□□ -1.79
SAMM50-202ENST00000465768 IRF3Q14653 427 aa3.86□□□□□ -1.79
SAMM50-202ENST00000465768 SLC15A2Q16348 729 aa3.86□□□□□ -1.79
SAMM50-202ENST00000465768 RILPL1Q5EBL4 403 aa3.86□□□□□ -1.79
SAMM50-202ENST00000465768 METTL2BQ6P1Q9 378 aaKnown RBP3.86□□□□□ -1.79
SAMM50-202ENST00000465768 C8orf82Q6P1X6 216 aaPredicted RBP3.86□□□□□ -1.79
SAMM50-202ENST00000465768 CFAP77Q6ZQR2 320 aa3.86□□□□□ -1.79
SAMM50-202ENST00000465768 CCDC13Q8IYE1 715 aa3.86□□□□□ -1.79
SAMM50-202ENST00000465768 HACE1Q8IYU2 909 aa3.86□□□□□ -1.79
SAMM50-202ENST00000465768 NME8Q8N427 588 aa3.86□□□□□ -1.79
SAMM50-202ENST00000465768 NEXN-AS1Q8NBZ9 246 aa3.86□□□□□ -1.79
SAMM50-202ENST00000465768 PIGBQ92521 554 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms