RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 SCARF2Q96GP6 870 aaPredicted RBP13.69□□□□□ -0.22
RPP40-203ENST00000464646 COX14Q96I36 57 aa13.69□□□□□ -0.22
RPP40-203ENST00000464646 TSPY26PQ9H489 355 aa13.69□□□□□ -0.22
RPP40-203ENST00000464646 KLC4Q9NSK0 619 aa13.69□□□□□ -0.22
RPP40-203ENST00000464646 ABHD10Q9NUJ1 306 aa13.69□□□□□ -0.22
RPP40-203ENST00000464646 OCIAD1Q9NX40 245 aa13.69□□□□□ -0.22
RPP40-203ENST00000464646 UBP1Q9NZI7 540 aa13.69□□□□□ -0.22
RPP40-203ENST00000464646 VPS18Q9P253 973 aa13.69□□□□□ -0.22
RPP40-203ENST00000464646 DNAJC16Q9Y2G8 782 aa13.69□□□□□ -0.22
RPP40-203ENST00000464646 PDZK1P1A8MUH7 402 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 B8ZZF3 427 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 EML2O95834 649 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 MMP2P08253 660 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 HNRNPH3P31942 346 aaKnown RBP13.68□□□□□ -0.22
RPP40-203ENST00000464646 CSF2RBP32927 897 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 ARHGAP25P42331 645 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 IFI35P80217 286 aaPredicted RBP13.68□□□□□ -0.22
RPP40-203ENST00000464646 CDK18Q07002 472 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 NR1D2Q14995 579 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 DCAF12Q5T6F0 453 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 HENMT1Q5T8I9 393 aaKnown RBP13.68□□□□□ -0.22
RPP40-203ENST00000464646 CCDC50Q8IVM0 306 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 RHOT1Q8IXI2 618 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 CACNA2D3Q8IZS8 1091 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 PLD5Q8N7P1 536 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 FATE1Q969F0 183 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 PMEPA1Q969W9 287 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 RNF31Q96EP0 1072 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 CTRCQ99895 268 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.68□□□□□ -0.22
RPP40-203ENST00000464646 RMI1Q9H9A7 625 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 BPIFA1Q9NP55 256 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 DDX56Q9NY93 547 aaKnown RBP13.68□□□□□ -0.22
RPP40-203ENST00000464646 ATXN10Q9UBB4 475 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 TRIM10Q9UDY6 481 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 TBC1D29Q9UFV1 150 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 ACSL6Q9UKU0 697 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 NENFQ9UMX5 172 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 ZNF711Q9Y462 761 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 PCDHGA4Q9Y5G9 962 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 PCYT1BQ9Y5K3 369 aaPredicted RBP13.68□□□□□ -0.22
RPP40-203ENST00000464646 B3GALT1Q9Y5Z6 326 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 ITPR1Q14643 2758 aa13.68□□□□□ -0.22
RPP40-203ENST00000464646 AHCTF1Q8WYP5 2266 aa13.67□□□□□ -0.22
RPP40-203ENST00000464646 SDK2Q58EX2 2172 aa13.67□□□□□ -0.22
RPP40-203ENST00000464646 A0A0A6YYK5 440 aaPredicted RBP13.67□□□□□ -0.22
RPP40-203ENST00000464646 MTX2O75431 263 aa13.67□□□□□ -0.22
RPP40-203ENST00000464646 MT-CYBP00156 380 aaPredicted RBP13.67□□□□□ -0.22
RPP40-203ENST00000464646 VIPP01282 170 aa13.67□□□□□ -0.22
RPP40-203ENST00000464646 THRAP10827 490 aa13.67□□□□□ -0.22
RPP40-203ENST00000464646 ZNF8P17098 575 aaPredicted RBP13.67□□□□□ -0.22
RPP40-203ENST00000464646 AMD1P17707 334 aa13.67□□□□□ -0.22
RPP40-203ENST00000464646 FASLGP48023 281 aa13.67□□□□□ -0.22
RPP40-203ENST00000464646 GTF2H3Q13889 308 aa13.67□□□□□ -0.22
RPP40-203ENST00000464646 SKOR2Q2VWA4 1001 aaPredicted RBP13.67□□□□□ -0.22
RPP40-203ENST00000464646 ANKS6Q68DC2 871 aa13.67□□□□□ -0.22
RPP40-203ENST00000464646 BZW1Q7L1Q6 419 aaKnown RBP13.67□□□□□ -0.22
RPP40-203ENST00000464646 SFRP1Q8N474 314 aa13.67□□□□□ -0.22
RPP40-203ENST00000464646 SLC25A41Q8N5S1 370 aa13.67□□□□□ -0.22
RPP40-203ENST00000464646 CNTD1Q8N815 330 aa13.67□□□□□ -0.22
RPP40-203ENST00000464646 GPR26Q8NDV2 337 aa13.67□□□□□ -0.22
RPP40-203ENST00000464646 SPATA22Q8NHS9 363 aa13.67□□□□□ -0.22
RPP40-203ENST00000464646 HAUS1Q96CS2 278 aa13.67□□□□□ -0.22
RPP40-203ENST00000464646 TTC25Q96NG3 672 aa13.67□□□□□ -0.22
RPP40-203ENST00000464646 WDR24Q96S15 920 aa13.67□□□□□ -0.22
RPP40-203ENST00000464646 LYSMD1Q96S90 227 aa13.67□□□□□ -0.22
RPP40-203ENST00000464646 DNAJC7Q99615 494 aa13.67□□□□□ -0.22
RPP40-203ENST00000464646 HERPUD2Q9BSE4 406 aa13.67□□□□□ -0.22
RPP40-203ENST00000464646 TBC1D10AQ9BXI6 508 aa13.67□□□□□ -0.22
RPP40-203ENST00000464646 BRD8Q9H0E9 1235 aa13.67□□□□□ -0.22
RPP40-203ENST00000464646 CARD9Q9H257 536 aa13.67□□□□□ -0.22
RPP40-203ENST00000464646 PRDM8Q9NQV8 689 aa13.67□□□□□ -0.22
RPP40-203ENST00000464646 RAD18Q9NS91 495 aa13.67□□□□□ -0.22
RPP40-203ENST00000464646 KLHL8Q9P2G9 620 aaPredicted RBP13.67□□□□□ -0.22
RPP40-203ENST00000464646 CNOT6Q9ULM6 557 aaKnown RBP13.67□□□□□ -0.22
RPP40-203ENST00000464646 SSUH2Q9Y2M2 353 aa13.67□□□□□ -0.22
RPP40-203ENST00000464646 RGSL1A5PLK6 1076 aa13.66□□□□□ -0.22
RPP40-203ENST00000464646 NUAK1O60285 661 aa13.66□□□□□ -0.22
RPP40-203ENST00000464646 RAD1O60671 282 aa13.66□□□□□ -0.22
RPP40-203ENST00000464646 MFAP3LO75121 409 aa13.66□□□□□ -0.22
RPP40-203ENST00000464646 FAM87AP0C7U9 286 aa13.66□□□□□ -0.22
RPP40-203ENST00000464646 F3P13726 295 aa13.66□□□□□ -0.22
RPP40-203ENST00000464646 COMTP21964 271 aa13.66□□□□□ -0.22
RPP40-203ENST00000464646 SLC1A1P43005 524 aa13.66□□□□□ -0.22
RPP40-203ENST00000464646 RAB15P59190 212 aa13.66□□□□□ -0.22
RPP40-203ENST00000464646 FOXM1Q08050 763 aa13.66□□□□□ -0.22
RPP40-203ENST00000464646 CCDC181Q5TID7 509 aa13.66□□□□□ -0.22
RPP40-203ENST00000464646 SLC9A4Q6AI14 798 aa13.66□□□□□ -0.22
RPP40-203ENST00000464646 IYDQ6PHW0 289 aa13.66□□□□□ -0.22
RPP40-203ENST00000464646 LRRTM4Q86VH4 590 aa13.66□□□□□ -0.22
RPP40-203ENST00000464646 VSTM4Q8IW00 320 aa13.66□□□□□ -0.22
RPP40-203ENST00000464646 RAVER1Q8IY67 606 aaKnown RBP13.66□□□□□ -0.22
RPP40-203ENST00000464646 TRAM1L1Q8N609 369 aa13.66□□□□□ -0.22
RPP40-203ENST00000464646 TFB1MQ8WVM0 346 aaKnown RBP13.66□□□□□ -0.22
RPP40-203ENST00000464646 ZSCAN5AQ9BUG6 496 aa13.66□□□□□ -0.22
RPP40-203ENST00000464646 ASPSCR1Q9BZE9 553 aa13.66□□□□□ -0.22
RPP40-203ENST00000464646 SLC25A51Q9H1U9 297 aa13.66□□□□□ -0.22
RPP40-203ENST00000464646 GLOD4Q9HC38 313 aa13.66□□□□□ -0.22
RPP40-203ENST00000464646 TRIM39Q9HCM9 518 aa13.66□□□□□ -0.22
RPP40-203ENST00000464646 SARS2Q9NP81 518 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms