RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 ACP5P13686 325 aa18.66■□□□□ 0.58
SF3A1-205ENST00000463818 PTPN3P26045 913 aa18.66■□□□□ 0.58
SF3A1-205ENST00000463818 NR2C2P49116 596 aa18.66■□□□□ 0.58
SF3A1-205ENST00000463818 GPLD1P80108 840 aa18.66■□□□□ 0.58
SF3A1-205ENST00000463818 SRSF6Q13247 344 aaKnown RBP18.66■□□□□ 0.58
SF3A1-205ENST00000463818 TFDP2Q14188 446 aa18.66■□□□□ 0.58
SF3A1-205ENST00000463818 TAZQ16635 292 aa18.66■□□□□ 0.58
SF3A1-205ENST00000463818 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.66■□□□□ 0.58
SF3A1-205ENST00000463818 ZNF648Q5T619 568 aaPredicted RBP18.66■□□□□ 0.58
SF3A1-205ENST00000463818 ALS2CLQ60I27 953 aa18.66■□□□□ 0.58
SF3A1-205ENST00000463818 KAZNQ674X7 775 aa18.66■□□□□ 0.58
SF3A1-205ENST00000463818 CCDC70Q6NSX1 233 aa18.66■□□□□ 0.58
SF3A1-205ENST00000463818 TMEM71Q6P5X7 295 aa18.66■□□□□ 0.58
SF3A1-205ENST00000463818 AHCYL2Q96HN2 611 aaKnown RBP18.66■□□□□ 0.58
SF3A1-205ENST00000463818 TEKT5Q96M29 485 aa18.66■□□□□ 0.58
SF3A1-205ENST00000463818 DPYSL5Q9BPU6 564 aa18.66■□□□□ 0.58
SF3A1-205ENST00000463818 B3GNT4Q9C0J1 378 aa18.66■□□□□ 0.58
SF3A1-205ENST00000463818 OR2AG1Q9H205 316 aa18.66■□□□□ 0.58
SF3A1-205ENST00000463818 CARD9Q9H257 536 aa18.66■□□□□ 0.58
SF3A1-205ENST00000463818 TRIM39Q9HCM9 518 aa18.66■□□□□ 0.58
SF3A1-205ENST00000463818 TMEM9Q9P0T7 183 aa18.66■□□□□ 0.58
SF3A1-205ENST00000463818 A0A0A6YYK5 440 aaPredicted RBP18.65■□□□□ 0.58
SF3A1-205ENST00000463818 PMPCBO75439 489 aa18.65■□□□□ 0.58
SF3A1-205ENST00000463818 NDST3O95803 873 aa18.65■□□□□ 0.58
SF3A1-205ENST00000463818 FGF3P11487 239 aaPredicted RBP18.65■□□□□ 0.58
SF3A1-205ENST00000463818 ZNF8P17098 575 aaPredicted RBP18.65■□□□□ 0.58
SF3A1-205ENST00000463818 CD82P27701 267 aa18.65■□□□□ 0.58
SF3A1-205ENST00000463818 CSF2RBP32927 897 aa18.65■□□□□ 0.58
SF3A1-205ENST00000463818 PPM1FP49593 454 aaPredicted RBP18.65■□□□□ 0.58
SF3A1-205ENST00000463818 LY6DQ14210 128 aa18.65■□□□□ 0.58
SF3A1-205ENST00000463818 PRKD1Q15139 912 aaPredicted RBP18.65■□□□□ 0.58
SF3A1-205ENST00000463818 SLC14A2Q15849 920 aa18.65■□□□□ 0.58
SF3A1-205ENST00000463818 SPOCD1Q6ZMY3 1216 aa18.65■□□□□ 0.58
SF3A1-205ENST00000463818 TRAM1L1Q8N609 369 aa18.65■□□□□ 0.58
SF3A1-205ENST00000463818 AGBL5Q8NDL9 886 aa18.65■□□□□ 0.58
SF3A1-205ENST00000463818 TFB1MQ8WVM0 346 aaKnown RBP18.65■□□□□ 0.58
SF3A1-205ENST00000463818 TAAR9Q96RI9 348 aa18.65■□□□□ 0.58
SF3A1-205ENST00000463818 ZSCAN5AQ9BUG6 496 aa18.65■□□□□ 0.58
SF3A1-205ENST00000463818 TRIM5Q9C035 493 aa18.65■□□□□ 0.58
SF3A1-205ENST00000463818 SARS2Q9NP81 518 aaKnown RBP18.65■□□□□ 0.58
SF3A1-205ENST00000463818 RAD18Q9NS91 495 aa18.65■□□□□ 0.58
SF3A1-205ENST00000463818 UBP1Q9NZI7 540 aa18.65■□□□□ 0.58
SF3A1-205ENST00000463818 ZNF711Q9Y462 761 aa18.65■□□□□ 0.58
SF3A1-205ENST00000463818 PCDHB11Q9Y5F2 797 aa18.65■□□□□ 0.58
SF3A1-205ENST00000463818 PSTPIP1O43586 416 aa18.64■□□□□ 0.57
SF3A1-205ENST00000463818 SLC4A1P02730 911 aa18.64■□□□□ 0.57
SF3A1-205ENST00000463818 THRAP10827 490 aa18.64■□□□□ 0.57
SF3A1-205ENST00000463818 PECAM1P16284 738 aaPredicted RBP18.64■□□□□ 0.57
SF3A1-205ENST00000463818 BPIP17213 487 aa18.64■□□□□ 0.57
SF3A1-205ENST00000463818 CSTF2P33240 577 aaKnown RBP eCLIP18.64■□□□□ 0.57
SF3A1-205ENST00000463818 CD68P34810 354 aaPredicted RBP18.64■□□□□ 0.57
SF3A1-205ENST00000463818 HADHBP55084 474 aaKnown RBP18.64■□□□□ 0.57
SF3A1-205ENST00000463818 HHEXQ03014 270 aa18.64■□□□□ 0.57
SF3A1-205ENST00000463818 ADCY2Q08462 1091 aa18.64■□□□□ 0.57
SF3A1-205ENST00000463818 NFATC2Q13469 925 aa18.64■□□□□ 0.57
SF3A1-205ENST00000463818 ZNF569Q5MCW4 686 aa18.64■□□□□ 0.57
SF3A1-205ENST00000463818 MANEAQ5SRI9 462 aa18.64■□□□□ 0.57
SF3A1-205ENST00000463818 ADGRG6Q86SQ4 1221 aa18.64■□□□□ 0.57
SF3A1-205ENST00000463818 SLC9B2Q86UD5 537 aa18.64■□□□□ 0.57
SF3A1-205ENST00000463818 DTX1Q86Y01 620 aa18.64■□□□□ 0.57
SF3A1-205ENST00000463818 TC2NQ8N9U0 490 aa18.64■□□□□ 0.57
SF3A1-205ENST00000463818 OR10G6Q8NH81 332 aa18.64■□□□□ 0.57
SF3A1-205ENST00000463818 SH3KBP1Q96B97 665 aa18.64■□□□□ 0.57
SF3A1-205ENST00000463818 HERPUD2Q9BSE4 406 aa18.64■□□□□ 0.57
SF3A1-205ENST00000463818 SEMA4CQ9C0C4 833 aa18.64■□□□□ 0.57
SF3A1-205ENST00000463818 GOLPH3Q9H4A6 298 aa18.64■□□□□ 0.57
SF3A1-205ENST00000463818 PRDM8Q9NQV8 689 aa18.64■□□□□ 0.57
SF3A1-205ENST00000463818 PDP2Q9P2J9 529 aa18.64■□□□□ 0.57
SF3A1-205ENST00000463818 A6NCN8 305 aa18.63■□□□□ 0.57
SF3A1-205ENST00000463818 AURKAO14965 403 aa18.63■□□□□ 0.57
SF3A1-205ENST00000463818 ZRANB2O95218 330 aaKnown RBP eCLIP18.63■□□□□ 0.57
SF3A1-205ENST00000463818 CLCNKAP51800 687 aa18.63■□□□□ 0.57
SF3A1-205ENST00000463818 DCDC1P59894 354 aa18.63■□□□□ 0.57
SF3A1-205ENST00000463818 WASHC5Q12768 1159 aa18.63■□□□□ 0.57
SF3A1-205ENST00000463818 PDPK2PQ6A1A2 396 aa18.63■□□□□ 0.57
SF3A1-205ENST00000463818 ZNF605Q86T29 641 aa18.63■□□□□ 0.57
SF3A1-205ENST00000463818 VASH2Q86V25 355 aa18.63■□□□□ 0.57
SF3A1-205ENST00000463818 RCOR2Q8IZ40 523 aa18.63■□□□□ 0.57
SF3A1-205ENST00000463818 GLYATL1Q969I3 302 aa18.63■□□□□ 0.57
SF3A1-205ENST00000463818 SRPK1Q96SB4 655 aaKnown RBP18.63■□□□□ 0.57
SF3A1-205ENST00000463818 STN1Q9H668 368 aaKnown RBP18.63■□□□□ 0.57
SF3A1-205ENST00000463818 BPIFA1Q9NP55 256 aa18.63■□□□□ 0.57
SF3A1-205ENST00000463818 KLC4Q9NSK0 619 aa18.63■□□□□ 0.57
SF3A1-205ENST00000463818 OCIAD1Q9NX40 245 aa18.63■□□□□ 0.57
SF3A1-205ENST00000463818 NFKBIL1Q9UBC1 381 aaPredicted RBP18.63■□□□□ 0.57
SF3A1-205ENST00000463818 FAM153AQ9UHL3 310 aa18.63■□□□□ 0.57
SF3A1-205ENST00000463818 PCDHA13Q9Y5I0 950 aa18.63■□□□□ 0.57
SF3A1-205ENST00000463818 SPO11Q9Y5K1 396 aa18.63■□□□□ 0.57
SF3A1-205ENST00000463818 ADGRG1Q9Y653 693 aa18.63■□□□□ 0.57
SF3A1-205ENST00000463818 KIR2DS5A0A0G2JLQ3 304 aa18.62■□□□□ 0.57
SF3A1-205ENST00000463818 A0A0G2JNG1 304 aa18.62■□□□□ 0.57
SF3A1-205ENST00000463818 OR5K4A6NMS3 321 aa18.62■□□□□ 0.57
SF3A1-205ENST00000463818 KIR2DS3K7RE56 304 aa18.62■□□□□ 0.57
SF3A1-205ENST00000463818 DUX1O43812 170 aa18.62■□□□□ 0.57
SF3A1-205ENST00000463818 F3P13726 295 aa18.62■□□□□ 0.57
SF3A1-205ENST00000463818 SLC2A4P14672 509 aa18.62■□□□□ 0.57
SF3A1-205ENST00000463818 WNT3AP56704 352 aa18.62■□□□□ 0.57
SF3A1-205ENST00000463818 KIR2DS5Q14953 304 aa18.62■□□□□ 0.57
SF3A1-205ENST00000463818 SNAP47Q5SQN1 464 aa18.62■□□□□ 0.57
SF3A1-205ENST00000463818 SARM1Q6SZW1 724 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms