RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 ZNF548Q8NEK5 533 aaPredicted RBP3.8□□□□□ -1.8
CLK1-206ENST00000461326 WFIKKN2Q8TEU8 576 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 PTPMT1Q8WUK0 201 aaPredicted RBP3.8□□□□□ -1.8
CLK1-206ENST00000461326 TAAR8Q969N4 342 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 URB1-AS1Q96HZ7 61 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 RADILQ96JH8 1075 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 EGLN2Q96KS0 407 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 DGAT2Q96PD7 388 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 GCNAQ96QF7 691 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 KXD1Q9BQD3 176 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 SF3B5Q9BWJ5 86 aaKnown RBP3.8□□□□□ -1.8
CLK1-206ENST00000461326 DCLK3Q9C098 648 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 MMP27Q9H306 513 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 PIGMQ9H3S5 423 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 ERVMER34-1Q9H9K5 563 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 MMP25Q9NPA2 562 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 DNAJB4Q9UDY4 337 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 DBNLQ9UJU6 430 aaKnown RBP3.8□□□□□ -1.8
CLK1-206ENST00000461326 ANAPC2Q9UJX6 822 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 ZHX1Q9UKY1 873 aaPredicted RBP3.8□□□□□ -1.8
CLK1-206ENST00000461326 AGO1Q9UL18 857 aaKnown RBP3.8□□□□□ -1.8
CLK1-206ENST00000461326 ZNF148Q9UQR1 794 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 TMEM184BQ9Y519 407 aaPredicted RBP3.8□□□□□ -1.8
CLK1-206ENST00000461326 LOC102723996A0A087X1L8 192 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 A0A1W2PRQ8 180 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 CPED1A4D0V7 1026 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 EIF4E1BA6NMX2 242 aaKnown RBP3.79□□□□□ -1.8
CLK1-206ENST00000461326 H3BQ06 376 aaPredicted RBP3.79□□□□□ -1.8
CLK1-206ENST00000461326 H7C0S8 307 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 HS3ST1O14792 307 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 RGS14O43566 566 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 ZIC3O60481 467 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 OAZ2O95190 189 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 CH25HO95992 272 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 EGFP01133 1207 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 ICAM1P05362 532 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 MYBL1P10243 752 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 PSG1P11464 419 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 HOXB2P14652 356 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 C21orf33P30042 268 aaPredicted RBP3.79□□□□□ -1.8
CLK1-206ENST00000461326 EIF2S3P41091 472 aaKnown RBP3.79□□□□□ -1.8
CLK1-206ENST00000461326 COMPP49747 757 aaPredicted RBP3.79□□□□□ -1.8
CLK1-206ENST00000461326 MXI1P50539 228 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 CLCNKAP51800 687 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 SEC61BP60468 96 aaKnown RBP3.79□□□□□ -1.8
CLK1-206ENST00000461326 PSMC6P62333 389 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 SIRPAP78324 504 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 GRSF1Q12849 480 aaKnown RBP eCLIP3.79□□□□□ -1.8
CLK1-206ENST00000461326 SNTB1Q13884 538 aaKnown RBP3.79□□□□□ -1.8
CLK1-206ENST00000461326 HNF4GQ14541 408 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 DECR1Q16698 335 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 AMZ1Q400G9 498 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 ADALQ6DHV7 355 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 HIST2H2BCQ6DN03 193 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 HIST2H2BDQ6DRA6 164 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 TYW3Q6IPR3 259 aaKnown RBP3.79□□□□□ -1.8
CLK1-206ENST00000461326 KRTAP5-1Q6L8H4 278 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 TPRG1Q6ZUI0 275 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 SDCCAG8Q86SQ7 713 aaPredicted RBP3.79□□□□□ -1.8
CLK1-206ENST00000461326 ZC3HC1Q86WB0 502 aaKnown RBP3.79□□□□□ -1.8
CLK1-206ENST00000461326 GUF1Q8N442 669 aaKnown RBP3.79□□□□□ -1.8
CLK1-206ENST00000461326 TSPAN14Q8NG11 270 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 THAP6Q8TBB0 222 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 OIT3Q8WWZ8 545 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 TMCO6Q96DC7 493 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 TXNDC15Q96J42 360 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 GAD1Q99259 594 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 PAFAH2Q99487 392 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 EDEM3Q9BZQ6 932 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 SPATC1LQ9H0A9 340 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 OR10A4Q9H209 315 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 TRMT1Q9NXH9 659 aaKnown RBP3.79□□□□□ -1.8
CLK1-206ENST00000461326 IL17BQ9UHF5 180 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 AMACRQ9UHK6 382 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 PLAGL1Q9UM63 463 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 WBP11Q9Y2W2 641 aaKnown RBP3.79□□□□□ -1.8
CLK1-206ENST00000461326 SQORQ9Y6N5 450 aa3.79□□□□□ -1.8
CLK1-206ENST00000461326 GPR75-ASB3A0A0A6YYF3 556 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 A0A0U1RQJ8 604 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 BECN2A8MW95 431 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 B4DGG1 531 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 TNFRSF13BO14836 293 aaPredicted RBP3.78□□□□□ -1.8
CLK1-206ENST00000461326 KRT86O43790 486 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 SERPINI2O75830 405 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 TOMM40O96008 361 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 G6PDP11413 515 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 PRLRP16471 622 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 BDKRB2P30411 391 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 MATR3P43243 847 aaKnown RBP eCLIP3.78□□□□□ -1.8
CLK1-206ENST00000461326 MMP14P50281 582 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 RAD23AP54725 363 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 HNRNPH2P55795 449 aaKnown RBP3.78□□□□□ -1.8
CLK1-206ENST00000461326 TRAF1Q13077 416 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 GPS2Q13227 327 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 KRT81Q14533 505 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 MVPQ14764 893 aaKnown RBP3.78□□□□□ -1.8
CLK1-206ENST00000461326 EFNB3Q15768 340 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 EIF2S3LQ2VIR3 472 aaKnown RBP3.78□□□□□ -1.8
CLK1-206ENST00000461326 ATP13A5Q4VNC0 1218 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 LCN10Q6JVE6 187 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms