RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 KCNK4Q9NYG8 393 aa11.69□□□□□ -0.54
SOX2-OT-201ENST00000460739 AKAP7Q9P0M2 348 aaPredicted RBP11.69□□□□□ -0.54
SOX2-OT-201ENST00000460739 TBC1D29Q9UFV1 150 aa11.69□□□□□ -0.54
SOX2-OT-201ENST00000460739 SHOC2Q9UQ13 582 aa11.69□□□□□ -0.54
SOX2-OT-201ENST00000460739 ZNF711Q9Y462 761 aa11.69□□□□□ -0.54
SOX2-OT-201ENST00000460739 ADGRG1Q9Y653 693 aa11.69□□□□□ -0.54
SOX2-OT-201ENST00000460739 hCG_1818297A0A087WSY0 165 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 PRAMEF33A0A0G2JMD5 474 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 A6NCN8 305 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 GPR89AB7ZAQ6 455 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 C9orf172C9J069 976 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 AGRPO00253 132 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 EFSO43281 561 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 MTSS1O43312 755 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 GRID2O43424 1007 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 PRAMEF10O60809 474 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 ZRANB2O95218 330 aaKnown RBP eCLIP11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 GPR89BP0CG08 455 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 ACP5P13686 325 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 CSF2RBP32927 897 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 CD68P34810 354 aaPredicted RBP11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 MAPK10P53779 464 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 CFHR1Q03591 330 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 C19orf57Q0VDD7 668 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 ZNF569Q5MCW4 686 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 NKAIN2Q5VXU1 208 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 CCDC70Q6NSX1 233 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 C11orf63Q6NUN7 778 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 IYDQ6PHW0 289 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 DTX1Q86Y01 620 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 RCOR2Q8IZ40 523 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 TRAM1L1Q8N609 369 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 RCBTB1Q8NDN9 531 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 TTC9Q92623 222 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 P3H4Q92791 437 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 USP7Q93009 1102 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 GPR63Q9BZJ6 419 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 GOLPH3Q9H4A6 298 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 TRIM39Q9HCM9 518 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 SARS2Q9NP81 518 aaKnown RBP11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 UBP1Q9NZI7 540 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 FOXJ2Q9P0K8 574 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 PDP2Q9P2J9 529 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 ATXN10Q9UBB4 475 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 PCDHA13Q9Y5I0 950 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 SPO11Q9Y5K1 396 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 SDK2Q58EX2 2172 aa11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 ZNF106Q9H2Y7 1883 aaKnown RBP11.68□□□□□ -0.54
SOX2-OT-201ENST00000460739 TRBV23OR9-2A0A075B6M9 112 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 LOC285095A0A1B0GVY8 99 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 CHUKO15111 745 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 PMPCBO75439 489 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 SLC25A14O95258 325 aaPredicted RBP11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 EPOP01588 193 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 THRAP10827 490 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 FGF3P11487 239 aaPredicted RBP11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 CCL4P13236 92 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 F3P13726 295 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 SLC2A4P14672 509 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 ZNF8P17098 575 aaPredicted RBP11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 BPIP17213 487 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 NFKB1P19838 968 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 CD82P27701 267 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 MARCKSL1P49006 195 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 CLCNKAP51800 687 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 HHEXQ03014 270 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 LLGL1Q15334 1064 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 TGIF1Q15583 401 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 TMEM164Q5U3C3 297 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 ALS2CLQ60I27 953 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 KAZNQ674X7 775 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 TMEM71Q6P5X7 295 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 KDELC1Q6UW63 502 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 ADGRG6Q86SQ4 1221 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 ZNF761Q86XN6 746 aaPredicted RBP11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 PHYKPLQ8IUZ5 450 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 GLYATL1Q969I3 302 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 RBM41Q96IZ5 413 aaKnown RBP11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 PLEKHG4BQ96PX9 1271 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 VAT1Q99536 393 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 SLC38A3Q99624 504 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 HERPUD2Q9BSE4 406 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 OR2AG1Q9H205 316 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 STN1Q9H668 368 aaKnown RBP11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 LUC7LQ9NQ29 371 aaKnown RBP11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 FAM153AQ9UHL3 310 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 TFR2Q9UP52 801 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 KCNK6Q9Y257 313 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 PCDHGA3Q9Y5H0 932 aa11.67□□□□□ -0.54
SOX2-OT-201ENST00000460739 KIR2DS5A0A0G2JLQ3 304 aa11.66□□□□□ -0.54
SOX2-OT-201ENST00000460739 A0A0G2JNG1 304 aa11.66□□□□□ -0.54
SOX2-OT-201ENST00000460739 OR5K4A6NMS3 321 aa11.66□□□□□ -0.54
SOX2-OT-201ENST00000460739 HACD1B0YJ81 288 aa11.66□□□□□ -0.54
SOX2-OT-201ENST00000460739 KIR2DS3K7RE56 304 aa11.66□□□□□ -0.54
SOX2-OT-201ENST00000460739 AURKAO14965 403 aa11.66□□□□□ -0.54
SOX2-OT-201ENST00000460739 DUX1O43812 170 aa11.66□□□□□ -0.54
SOX2-OT-201ENST00000460739 VEGFDO43915 354 aa11.66□□□□□ -0.54
SOX2-OT-201ENST00000460739 SLC4A1P02730 911 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms