RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 MAZP56270 477 aaKnown RBP22.76■■□□□ 1.23
PTPN4-208ENST00000460289 GLT6D1Q7Z4J2 308 aa22.76■■□□□ 1.23
PTPN4-208ENST00000460289 SPRED1Q7Z699 444 aa22.76■■□□□ 1.23
PTPN4-208ENST00000460289 PHYKPLQ8IUZ5 450 aa22.76■■□□□ 1.23
PTPN4-208ENST00000460289 TTC30BQ8N4P2 665 aa22.76■■□□□ 1.23
PTPN4-208ENST00000460289 WDR36Q8NI36 951 aaKnown RBP22.76■■□□□ 1.23
PTPN4-208ENST00000460289 ZNF578Q96N58 590 aaPredicted RBP22.76■■□□□ 1.23
PTPN4-208ENST00000460289 TMEM74Q96NL1 305 aa22.76■■□□□ 1.23
PTPN4-208ENST00000460289 IL17CQ9P0M4 197 aa22.76■■□□□ 1.23
PTPN4-208ENST00000460289 SATB2Q9UPW6 733 aa22.76■■□□□ 1.23
PTPN4-208ENST00000460289 PKP3Q9Y446 797 aa22.76■■□□□ 1.23
PTPN4-208ENST00000460289 URB1O60287 2271 aaKnown RBP22.76■■□□□ 1.23
PTPN4-208ENST00000460289 A0A087WV48 116 aa22.75■■□□□ 1.23
PTPN4-208ENST00000460289 C5orf60A6NFR6 353 aa22.75■■□□□ 1.23
PTPN4-208ENST00000460289 D6RAR5 112 aa22.75■■□□□ 1.23
PTPN4-208ENST00000460289 AGTP01019 485 aa22.75■■□□□ 1.23
PTPN4-208ENST00000460289 PSMB4P28070 264 aa22.75■■□□□ 1.23
PTPN4-208ENST00000460289 GPR3P46089 330 aa22.75■■□□□ 1.23
PTPN4-208ENST00000460289 KLF1Q13351 362 aaPredicted RBP22.75■■□□□ 1.23
PTPN4-208ENST00000460289 TBC1D25Q3MII6 688 aa22.75■■□□□ 1.23
PTPN4-208ENST00000460289 C3orf38Q5JPI3 329 aa22.75■■□□□ 1.23
PTPN4-208ENST00000460289 RANBP10Q6VN20 620 aa22.75■■□□□ 1.23
PTPN4-208ENST00000460289 ZNF438Q7Z4V0 828 aa22.75■■□□□ 1.23
PTPN4-208ENST00000460289 CCDC110Q8TBZ0 833 aa22.75■■□□□ 1.23
PTPN4-208ENST00000460289 VPS35Q96QK1 796 aa22.75■■□□□ 1.23
PTPN4-208ENST00000460289 FICDQ9BVA6 458 aa22.75■■□□□ 1.23
PTPN4-208ENST00000460289 STRADBQ9C0K7 418 aa22.75■■□□□ 1.23
PTPN4-208ENST00000460289 OR2AG1Q9H205 316 aa22.75■■□□□ 1.23
PTPN4-208ENST00000460289 PRKAB1Q9Y478 270 aa22.75■■□□□ 1.23
PTPN4-208ENST00000460289 ARHGEF17Q96PE2 2063 aaPredicted RBP22.75■■□□□ 1.23
PTPN4-208ENST00000460289 CCDC187A0A096LP49 1063 aa22.74■■□□□ 1.23
PTPN4-208ENST00000460289 RRP8O43159 456 aaKnown RBP22.74■■□□□ 1.23
PTPN4-208ENST00000460289 NRDCO43847 1150 aa22.74■■□□□ 1.23
PTPN4-208ENST00000460289 VEGFDO43915 354 aa22.74■■□□□ 1.23
PTPN4-208ENST00000460289 CCDC175P0C221 793 aa22.74■■□□□ 1.23
PTPN4-208ENST00000460289 ZNF8P17098 575 aaPredicted RBP22.74■■□□□ 1.23
PTPN4-208ENST00000460289 RBMS1P29558 406 aaKnown RBP22.74■■□□□ 1.23
PTPN4-208ENST00000460289 SPAM1P38567 509 aa22.74■■□□□ 1.23
PTPN4-208ENST00000460289 EIF2S3P41091 472 aaKnown RBP22.74■■□□□ 1.23
PTPN4-208ENST00000460289 PDX1P52945 283 aa22.74■■□□□ 1.23
PTPN4-208ENST00000460289 ERVPABLB-1P60509 514 aa22.74■■□□□ 1.23
PTPN4-208ENST00000460289 B4GALNT1Q00973 533 aa22.74■■□□□ 1.23
PTPN4-208ENST00000460289 EIF3IQ13347 325 aaKnown RBP22.74■■□□□ 1.23
PTPN4-208ENST00000460289 NR1D2Q14995 579 aa22.74■■□□□ 1.23
PTPN4-208ENST00000460289 IGF2-ASQ6U949 168 aa22.74■■□□□ 1.23
PTPN4-208ENST00000460289 ADGRG6Q86SQ4 1221 aa22.74■■□□□ 1.23
PTPN4-208ENST00000460289 LRRC8AQ8IWT6 810 aa22.74■■□□□ 1.23
PTPN4-208ENST00000460289 SNIP1Q8TAD8 396 aaKnown RBP22.74■■□□□ 1.23
PTPN4-208ENST00000460289 GORASP1Q9BQQ3 440 aa22.74■■□□□ 1.23
PTPN4-208ENST00000460289 ARFGAP3Q9NP61 516 aa22.74■■□□□ 1.23
PTPN4-208ENST00000460289 IL26Q9NPH9 171 aa22.74■■□□□ 1.23
PTPN4-208ENST00000460289 PCDHGA8Q9Y5G5 932 aa22.74■■□□□ 1.23
PTPN4-208ENST00000460289 PCYT1BQ9Y5K3 369 aaPredicted RBP22.74■■□□□ 1.23
PTPN4-208ENST00000460289 CHUKO15111 745 aa22.73■■□□□ 1.23
PTPN4-208ENST00000460289 TLX3O43711 291 aaPredicted RBP22.73■■□□□ 1.23
PTPN4-208ENST00000460289 ACP5P13686 325 aa22.73■■□□□ 1.23
PTPN4-208ENST00000460289 SLC2A4P14672 509 aa22.73■■□□□ 1.23
PTPN4-208ENST00000460289 ALDH4A1P30038 563 aa22.73■■□□□ 1.23
PTPN4-208ENST00000460289 CCKBRP32239 447 aa22.73■■□□□ 1.23
PTPN4-208ENST00000460289 ADRA1AP35348 466 aa22.73■■□□□ 1.23
PTPN4-208ENST00000460289 INHBCP55103 352 aa22.73■■□□□ 1.23
PTPN4-208ENST00000460289 CLPPQ16740 277 aaPredicted RBP22.73■■□□□ 1.23
PTPN4-208ENST00000460289 PARP6Q2NL67 630 aa22.73■■□□□ 1.23
PTPN4-208ENST00000460289 ATP13A5Q4VNC0 1218 aa22.73■■□□□ 1.23
PTPN4-208ENST00000460289 SEL1L2Q5TEA6 688 aa22.73■■□□□ 1.23
PTPN4-208ENST00000460289 LRRC69Q6ZNQ3 347 aa22.73■■□□□ 1.23
PTPN4-208ENST00000460289 ARHGEF18Q6ZSZ5 1173 aa22.73■■□□□ 1.23
PTPN4-208ENST00000460289 BRSK1Q8TDC3 778 aa22.73■■□□□ 1.23
PTPN4-208ENST00000460289 PATE1Q8WXA2 126 aa22.73■■□□□ 1.23
PTPN4-208ENST00000460289 LIN37Q96GY3 246 aaPredicted RBP22.73■■□□□ 1.23
PTPN4-208ENST00000460289 DCBLD2Q96PD2 775 aa22.73■■□□□ 1.23
PTPN4-208ENST00000460289 THSD1Q9NS62 852 aa22.73■■□□□ 1.23
PTPN4-208ENST00000460289 PKD1L2Q7Z442 2459 aa22.73■■□□□ 1.23
PTPN4-208ENST00000460289 C2orf81A6NN90 581 aa22.72■■□□□ 1.23
PTPN4-208ENST00000460289 PPM1DO15297 605 aa22.72■■□□□ 1.23
PTPN4-208ENST00000460289 STX7O15400 261 aaKnown RBP22.72■■□□□ 1.23
PTPN4-208ENST00000460289 B4GAT1O43505 415 aa22.72■■□□□ 1.23
PTPN4-208ENST00000460289 CDK14O94921 469 aa22.72■■□□□ 1.23
PTPN4-208ENST00000460289 CLCNKAP51800 687 aa22.72■■□□□ 1.23
PTPN4-208ENST00000460289 OR1D5P58170 312 aa22.72■■□□□ 1.23
PTPN4-208ENST00000460289 ZNF648Q5T619 568 aaPredicted RBP22.72■■□□□ 1.23
PTPN4-208ENST00000460289 ZNF662Q6ZS27 426 aa22.72■■□□□ 1.23
PTPN4-208ENST00000460289 PIM3Q86V86 326 aa22.72■■□□□ 1.23
PTPN4-208ENST00000460289 SFRP1Q8N474 314 aa22.72■■□□□ 1.23
PTPN4-208ENST00000460289 FAM71DQ8N9W8 422 aa22.72■■□□□ 1.23
PTPN4-208ENST00000460289 GDAP1Q8TB36 358 aa22.72■■□□□ 1.23
PTPN4-208ENST00000460289 SLC35B2Q8TB61 432 aa22.72■■□□□ 1.23
PTPN4-208ENST00000460289 HNRNPLLQ8WVV9 542 aaKnown RBP22.72■■□□□ 1.23
PTPN4-208ENST00000460289 SLC46A1Q96NT5 459 aa22.72■■□□□ 1.23
PTPN4-208ENST00000460289 ALS2CR12Q96Q35 445 aa22.72■■□□□ 1.23
PTPN4-208ENST00000460289 EPB41L5Q9HCM4 733 aa22.72■■□□□ 1.23
PTPN4-208ENST00000460289 FEZ2Q9UHY8 353 aaPredicted RBP22.72■■□□□ 1.23
PTPN4-208ENST00000460289 ATXN7L1Q9ULK2 861 aaPredicted RBP22.72■■□□□ 1.23
PTPN4-208ENST00000460289 KCNK6Q9Y257 313 aa22.72■■□□□ 1.23
PTPN4-208ENST00000460289 DSPP15924 2871 aaKnown RBP22.71■■□□□ 1.23
PTPN4-208ENST00000460289 GLYATL1P3A0A0U1RQE8 302 aa22.71■■□□□ 1.23
PTPN4-208ENST00000460289 KMOO15229 486 aa22.71■■□□□ 1.23
PTPN4-208ENST00000460289 CPNE6O95741 557 aa22.71■■□□□ 1.23
PTPN4-208ENST00000460289 LPOP22079 712 aaPredicted RBP22.71■■□□□ 1.23
PTPN4-208ENST00000460289 MLLT3P42568 568 aaPredicted RBP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms