RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 A6NCN8 305 aa22.54■■□□□ 1.2
PTPN4-207ENST00000460162 GPR89AB7ZAQ6 455 aa22.54■■□□□ 1.2
PTPN4-207ENST00000460162 STMND1H3BQB6 276 aa22.54■■□□□ 1.2
PTPN4-207ENST00000460162 NUAK1O60285 661 aa22.54■■□□□ 1.2
PTPN4-207ENST00000460162 EML2O95834 649 aa22.54■■□□□ 1.2
PTPN4-207ENST00000460162 GPR89BP0CG08 455 aa22.54■■□□□ 1.2
PTPN4-207ENST00000460162 ACP5P13686 325 aa22.54■■□□□ 1.2
PTPN4-207ENST00000460162 PLA2G2AP14555 144 aa22.54■■□□□ 1.2
PTPN4-207ENST00000460162 CSTF2P33240 577 aaKnown RBP eCLIP22.54■■□□□ 1.2
PTPN4-207ENST00000460162 PDPK2PQ6A1A2 396 aa22.54■■□□□ 1.2
PTPN4-207ENST00000460162 PHYKPLQ8IUZ5 450 aa22.54■■□□□ 1.2
PTPN4-207ENST00000460162 AVL9Q8NBF6 648 aa22.54■■□□□ 1.2
PTPN4-207ENST00000460162 RNF25Q96BH1 459 aaPredicted RBP22.54■■□□□ 1.2
PTPN4-207ENST00000460162 EID2BQ96D98 161 aa22.54■■□□□ 1.2
PTPN4-207ENST00000460162 AHCYL2Q96HN2 611 aaKnown RBP22.54■■□□□ 1.2
PTPN4-207ENST00000460162 TAAR9Q96RI9 348 aa22.54■■□□□ 1.2
PTPN4-207ENST00000460162 DDA1Q9BW61 102 aa22.54■■□□□ 1.2
PTPN4-207ENST00000460162 SPATA16Q9BXB7 569 aa22.54■■□□□ 1.2
PTPN4-207ENST00000460162 TBC1D29Q9UFV1 150 aa22.54■■□□□ 1.2
PTPN4-207ENST00000460162 KCNK6Q9Y257 313 aa22.54■■□□□ 1.2
PTPN4-207ENST00000460162 SPOPO43791 374 aa22.53■■□□□ 1.2
PTPN4-207ENST00000460162 FGF3P11487 239 aaPredicted RBP22.53■■□□□ 1.2
PTPN4-207ENST00000460162 F3P13726 295 aa22.53■■□□□ 1.2
PTPN4-207ENST00000460162 EPHA4P54764 986 aa22.53■■□□□ 1.2
PTPN4-207ENST00000460162 DYNLT1P63172 113 aa22.53■■□□□ 1.2
PTPN4-207ENST00000460162 CDK18Q07002 472 aa22.53■■□□□ 1.2
PTPN4-207ENST00000460162 SRSF6Q13247 344 aaKnown RBP22.53■■□□□ 1.2
PTPN4-207ENST00000460162 PRKD1Q15139 912 aaPredicted RBP22.53■■□□□ 1.2
PTPN4-207ENST00000460162 PCSK7Q16549 785 aa22.53■■□□□ 1.2
PTPN4-207ENST00000460162 IYDQ6PHW0 289 aa22.53■■□□□ 1.2
PTPN4-207ENST00000460162 BZW1Q7L1Q6 419 aaKnown RBP22.53■■□□□ 1.2
PTPN4-207ENST00000460162 ZNF761Q86XN6 746 aaPredicted RBP22.53■■□□□ 1.2
PTPN4-207ENST00000460162 TRAM1L1Q8N609 369 aa22.53■■□□□ 1.2
PTPN4-207ENST00000460162 SH3KBP1Q96B97 665 aa22.53■■□□□ 1.2
PTPN4-207ENST00000460162 SRPK1Q96SB4 655 aaKnown RBP22.53■■□□□ 1.2
PTPN4-207ENST00000460162 TMEM9Q9P0T7 183 aa22.53■■□□□ 1.2
PTPN4-207ENST00000460162 PDP2Q9P2J9 529 aa22.53■■□□□ 1.2
PTPN4-207ENST00000460162 PCDHGA4Q9Y5G9 962 aa22.53■■□□□ 1.2
PTPN4-207ENST00000460162 ADGRG1Q9Y653 693 aa22.53■■□□□ 1.2
PTPN4-207ENST00000460162 A0A0A6YYK5 440 aaPredicted RBP22.52■■□□□ 1.2
PTPN4-207ENST00000460162 KIR2DS5A0A0G2JLQ3 304 aa22.52■■□□□ 1.2
PTPN4-207ENST00000460162 A0A0G2JNG1 304 aa22.52■■□□□ 1.2
PTPN4-207ENST00000460162 KIR2DS3K7RE56 304 aa22.52■■□□□ 1.2
PTPN4-207ENST00000460162 GRID2O43424 1007 aa22.52■■□□□ 1.2
PTPN4-207ENST00000460162 PSTPIP1O43586 416 aa22.52■■□□□ 1.2
PTPN4-207ENST00000460162 SLC4A1P02730 911 aa22.52■■□□□ 1.2
PTPN4-207ENST00000460162 ITGB2P05107 769 aa22.52■■□□□ 1.2
PTPN4-207ENST00000460162 NR2C2P49116 596 aa22.52■■□□□ 1.2
PTPN4-207ENST00000460162 RAB15P59190 212 aa22.52■■□□□ 1.2
PTPN4-207ENST00000460162 KIR2DS5Q14953 304 aa22.52■■□□□ 1.2
PTPN4-207ENST00000460162 TEX44Q53QW1 395 aa22.52■■□□□ 1.2
PTPN4-207ENST00000460162 ALS2CLQ60I27 953 aa22.52■■□□□ 1.2
PTPN4-207ENST00000460162 WDR74Q6RFH5 385 aaPredicted RBP22.52■■□□□ 1.2
PTPN4-207ENST00000460162 MFSD7Q6UXD7 560 aa22.52■■□□□ 1.2
PTPN4-207ENST00000460162 TMC3Q7Z5M5 1100 aa22.52■■□□□ 1.2
PTPN4-207ENST00000460162 SLC9B2Q86UD5 537 aa22.52■■□□□ 1.2
PTPN4-207ENST00000460162 VASH2Q86V25 355 aa22.52■■□□□ 1.2
PTPN4-207ENST00000460162 GPR26Q8NDV2 337 aa22.52■■□□□ 1.2
PTPN4-207ENST00000460162 GLOD4Q9HC38 313 aa22.52■■□□□ 1.2
PTPN4-207ENST00000460162 ATXN10Q9UBB4 475 aa22.52■■□□□ 1.2
PTPN4-207ENST00000460162 SHOC2Q9UQ13 582 aa22.52■■□□□ 1.2
PTPN4-207ENST00000460162 TRBV23OR9-2A0A075B6M9 112 aa22.51■■□□□ 1.19
PTPN4-207ENST00000460162 OR5K4A6NMS3 321 aa22.51■■□□□ 1.19
PTPN4-207ENST00000460162 B4E171 279 aa22.51■■□□□ 1.19
PTPN4-207ENST00000460162 AKR1B15C9JRZ8 316 aaPredicted RBP22.51■■□□□ 1.19
PTPN4-207ENST00000460162 SLC25A14O95258 325 aaPredicted RBP22.51■■□□□ 1.19
PTPN4-207ENST00000460162 NDST3O95803 873 aa22.51■■□□□ 1.19
PTPN4-207ENST00000460162 PIRTP0C851 137 aa22.51■■□□□ 1.19
PTPN4-207ENST00000460162 ZNF8P17098 575 aaPredicted RBP22.51■■□□□ 1.19
PTPN4-207ENST00000460162 COMTP21964 271 aa22.51■■□□□ 1.19
PTPN4-207ENST00000460162 TSPAN7P41732 249 aa22.51■■□□□ 1.19
PTPN4-207ENST00000460162 CDKN2BP42772 138 aa22.51■■□□□ 1.19
PTPN4-207ENST00000460162 PPM1FP49593 454 aaPredicted RBP22.51■■□□□ 1.19
PTPN4-207ENST00000460162 ATP1A2P50993 1020 aa22.51■■□□□ 1.19
PTPN4-207ENST00000460162 ARSDP51689 593 aa22.51■■□□□ 1.19
PTPN4-207ENST00000460162 CLCNKAP51800 687 aa22.51■■□□□ 1.19
PTPN4-207ENST00000460162 HADHBP55084 474 aaKnown RBP22.51■■□□□ 1.19
PTPN4-207ENST00000460162 TFDP2Q14188 446 aa22.51■■□□□ 1.19
PTPN4-207ENST00000460162 TAZQ16635 292 aa22.51■■□□□ 1.19
PTPN4-207ENST00000460162 KDELC2Q7Z4H8 507 aa22.51■■□□□ 1.19
PTPN4-207ENST00000460162 ZSCAN1Q8NBB4 408 aa22.51■■□□□ 1.19
PTPN4-207ENST00000460162 ART4Q93070 314 aa22.51■■□□□ 1.19
PTPN4-207ENST00000460162 GLYATL1Q969I3 302 aa22.51■■□□□ 1.19
PTPN4-207ENST00000460162 PMEPA1Q969W9 287 aa22.51■■□□□ 1.19
PTPN4-207ENST00000460162 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.51■■□□□ 1.19
PTPN4-207ENST00000460162 GPR63Q9BZJ6 419 aa22.51■■□□□ 1.19
PTPN4-207ENST00000460162 OR2AG1Q9H205 316 aa22.51■■□□□ 1.19
PTPN4-207ENST00000460162 EPB41L1Q9H4G0 881 aa22.51■■□□□ 1.19
PTPN4-207ENST00000460162 TRIM39Q9HCM9 518 aa22.51■■□□□ 1.19
PTPN4-207ENST00000460162 HYOU1Q9Y4L1 999 aa22.51■■□□□ 1.19
PTPN4-207ENST00000460162 MT-CYBP00156 380 aaPredicted RBP22.5■■□□□ 1.19
PTPN4-207ENST00000460162 TNNT1P13805 278 aa22.5■■□□□ 1.19
PTPN4-207ENST00000460162 MPSTP25325 297 aa22.5■■□□□ 1.19
PTPN4-207ENST00000460162 PTPN3P26045 913 aa22.5■■□□□ 1.19
PTPN4-207ENST00000460162 NOP2P46087 812 aaKnown RBP22.5■■□□□ 1.19
PTPN4-207ENST00000460162 NFATC2Q13469 925 aa22.5■■□□□ 1.19
PTPN4-207ENST00000460162 CCDC70Q6NSX1 233 aa22.5■■□□□ 1.19
PTPN4-207ENST00000460162 XKR5Q6UX68 686 aa22.5■■□□□ 1.19
PTPN4-207ENST00000460162 RNF214Q8ND24 703 aa22.5■■□□□ 1.19
PTPN4-207ENST00000460162 SPATA22Q8NHS9 363 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms