RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 FAM172BPA6NC97 362 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 WWP2O00308 870 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 UGT1A5P35504 534 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 MATKP42679 507 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 XYLT1Q86Y38 959 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 CHERPQ8IWX8 916 aaKnown RBP19.56■□□□□ 0.72
SNX27-204ENST00000458013 OR2T12Q8NG77 320 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 C5orf34Q96MH7 638 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 SERPINB7O75635 380 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 STATHP02808 62 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 COL6A1P12109 1028 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 ARF4P18085 180 aaPredicted RBP19.56■□□□□ 0.72
SNX27-204ENST00000458013 CDH3P22223 829 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 IGFBP5P24593 272 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 MTA1Q13330 715 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 ANXA8L1Q5VT79 327 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 KCT2Q8NC54 265 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 DMRTB1Q96MA1 342 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 CHIAQ9BZP6 476 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 MSRAQ9UJ68 235 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 HBS1LQ9Y450 684 aaKnown RBP19.56■□□□□ 0.72
SNX27-204ENST00000458013 PTPRJQ12913 1337 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 GLYATL1P3A0A0U1RQE8 302 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 S100A9P06702 114 aaKnown RBP19.56■□□□□ 0.72
SNX27-204ENST00000458013 LIX1Q8N485 282 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 NKX2-3Q8TAU0 364 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 RTKNQ9BST9 563 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 S100A14Q9HCY8 104 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 E7ENX8 843 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 LRIG2O94898 1065 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 UGT2B4P06133 528 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 FCHO2Q0JRZ9 810 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 C5orf22Q49AR2 442 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 SFRP1Q8N474 314 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 RNF31Q96EP0 1072 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 GORASP1Q9BQQ3 440 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 GIT1Q9Y2X7 761 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 DNTTP04053 509 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 GALNT18Q6P9A2 607 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 AHSA2Q719I0 299 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 ANKRD27Q96NW4 1050 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 GPR21Q99679 349 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 CTPS2Q9NRF8 586 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 ARHGEF33A8MVX0 844 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 RNF225M0QZC1 329 aaPredicted RBP19.55■□□□□ 0.72
SNX27-204ENST00000458013 BCKDKO14874 412 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 PGRMC2O15173 223 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 BPGMP07738 259 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 CFAP206Q8IYR0 622 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 GPC2Q8N158 579 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 MEIOBQ8N635 442 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 TRPM4Q8TD43 1214 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 OR8D1Q8WZ84 308 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 SPATA31C1P0DKV0 1188 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 MAT2AP31153 395 aaKnown RBP19.55■□□□□ 0.72
SNX27-204ENST00000458013 LSM12Q3MHD2 195 aaKnown RBP19.55■□□□□ 0.72
SNX27-204ENST00000458013 FRRS1Q6ZNA5 592 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 SLC43A3Q8NBI5 491 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 CDH22Q9UJ99 828 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.55■□□□□ 0.72
SNX27-204ENST00000458013 COL5A2P05997 1499 aaPredicted RBP19.55■□□□□ 0.72
SNX27-204ENST00000458013 URADA6NGE7 173 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 E9PAM4 449 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 MAGEB3O15480 346 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 PCBP2Q15366 365 aaKnown RBP eCLIP19.55■□□□□ 0.722e-9■■■■■ 28.6
SNX27-204ENST00000458013 ANKRD22Q5VYY1 191 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 RBFAQ8N0V3 343 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 MCFD2Q8NI22 146 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 SLC17A6Q9P2U8 582 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 SEC14L3Q9UDX4 400 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 CCNDBP1O95273 360 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 FABP3P05413 133 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 HTR1BP28222 390 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 CDK9P50750 372 aaKnown RBP19.55■□□□□ 0.72
SNX27-204ENST00000458013 TMEM199Q8N511 208 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 CPXM1Q96SM3 734 aa19.55■□□□□ 0.72
SNX27-204ENST00000458013 PRKCGP05129 697 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 TAF10Q12962 218 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 POF1BQ8WVV4 589 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 C1QTNF1Q9BXJ1 281 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 NMUR2Q9GZQ4 415 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 TESMINQ9Y4I5 508 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 TOR1BO14657 336 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 NMBRP28336 390 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 RYKP34925 604 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 CCR10P46092 362 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 TRAP1Q12931 704 aaKnown RBP19.54■□□□□ 0.72
SNX27-204ENST00000458013 ARCQ7LC44 396 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 IRF2BP2Q7Z5L9 587 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 ADAMTSL2Q86TH1 951 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 ALG3Q92685 438 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 CAPGP40121 348 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 ARFIP1P53367 373 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 SMARCB1Q12824 385 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 BHLHB9Q6PI77 547 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 OR10H5Q8NGA6 315 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 ABCG4Q9H172 646 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 LRTM1Q9HBL6 345 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 EURLQ9NYK6 297 aa19.54■□□□□ 0.72
SNX27-204ENST00000458013 SHOX2O60902 331 aaPredicted RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms