RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 AMY2BP19961 511 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 GPTP24298 496 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 ITGB8P26012 769 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 ABCD3P28288 659 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 PDHA2P29803 388 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 CAPGP40121 348 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 GPR3P46089 330 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 KCNJ5P48544 419 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 LMAN1P49257 510 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 AARSP49588 968 aaKnown RBP eCLIP5.42□□□□□ -1.54
VPS41-209ENST00000457055 RGS7P49802 495 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 ANXA11P50995 505 aaKnown RBP5.42□□□□□ -1.54
VPS41-209ENST00000457055 POLGP54098 1239 aaPredicted RBP5.42□□□□□ -1.54
VPS41-209ENST00000457055 ST5P78524 1137 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 ALDH6A1Q02252 535 aaKnown RBP5.42□□□□□ -1.54
VPS41-209ENST00000457055 DSG1Q02413 1049 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 CDC20Q12834 499 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 DYRK1AQ13627 763 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 CAPSQ13938 189 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 ARHGAP44Q17R89 818 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 PARP6Q2NL67 630 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 SMTNL2Q2TAL5 461 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 SLC44A4Q53GD3 710 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 PRAMEF14Q5SWL7 426 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 SPATA46Q5T0L3 261 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 TANGO2Q6ICL3 276 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 FAM111BQ6SJ93 734 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 MAMDC4Q6UXC1 1216 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 MFSD7Q6UXD7 560 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 RBM43Q6ZSC3 357 aaKnown RBP5.42□□□□□ -1.54
VPS41-209ENST00000457055 USP45Q70EL2 814 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 LARP4Q71RC2 724 aaKnown RBP eCLIP5.42□□□□□ -1.54
VPS41-209ENST00000457055 MIGA2Q7L4E1 593 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 MAEAQ7L5Y9 396 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 HEATR3Q7Z4Q2 680 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 RHOT2Q8IXI1 618 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 LIX1Q8N485 282 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 ZNF808Q8N4W9 903 aaPredicted RBP5.42□□□□□ -1.54
VPS41-209ENST00000457055 POGLUT1Q8NBL1 392 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 BHLHE23Q8NDY6 225 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 PCDH19Q8TAB3 1148 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 FANK1Q8TC84 345 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 CAPSLQ8WWF8 208 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 TANKQ92844 425 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 MR1Q95460 341 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 RAD51AP1Q96B01 352 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 GRAMD1AQ96CP6 724 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 C18orf8Q96DM3 657 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 FER1L6-AS2Q96M78 137 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 TESK2Q96S53 571 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 NEU1Q99519 415 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 HEPHQ9BQS7 1158 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 LRFN3Q9BTN0 628 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 EFHD1Q9BUP0 239 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 SF3B5Q9BWJ5 86 aaKnown RBP5.42□□□□□ -1.54
VPS41-209ENST00000457055 COLEC11Q9BWP8 271 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 BBS2Q9BXC9 721 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 CELF4Q9BZC1 486 aaKnown RBP5.42□□□□□ -1.54
VPS41-209ENST00000457055 FAM192AQ9GZU8 254 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 BRF2Q9HAW0 419 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 EPB41L5Q9HCM4 733 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 DNAJC11Q9NVH1 559 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 THAP1Q9NVV9 213 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 ASNSD1Q9NWL6 643 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 SAMD15Q9P1V8 674 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 RCOR3Q9P2K3 495 aaPredicted RBP5.42□□□□□ -1.54
VPS41-209ENST00000457055 SPASTQ9UBP0 616 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 DNAJB4Q9UDY4 337 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 CDC42EP3Q9UKI2 254 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 CBLCQ9ULV8 474 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 PACSIN2Q9UNF0 486 aaPredicted RBP5.42□□□□□ -1.54
VPS41-209ENST00000457055 IFT172Q9UG01 1749 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 PARP4Q9UKK3 1724 aaKnown RBP5.42□□□□□ -1.54
VPS41-209ENST00000457055 WDR33Q9C0J8 1336 aaKnown RBP5.42□□□□□ -1.54
VPS41-209ENST00000457055 COL15A1P39059 1388 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 KIAA0232Q92628 1395 aa5.42□□□□□ -1.54
VPS41-209ENST00000457055 RRBP1Q9P2E9 1410 aaKnown RBP5.41□□□□□ -1.54
VPS41-209ENST00000457055 SYCE1LA8MT33 242 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 ARVCFO00192 962 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 WRBO00258 174 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 RASGRF2O14827 1237 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 EIF3DO15371 548 aaKnown RBP eCLIP5.41□□□□□ -1.54
VPS41-209ENST00000457055 HCRTR2O43614 444 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 DTNBO60941 627 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 RHBDL1O75783 438 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 DNAJB5O75953 348 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 CDK14O94921 469 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 IL18RAPO95256 599 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 KCNK5O95279 499 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 LCA5LO95447 670 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 LGI1O95970 557 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 PRLP01236 227 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 CAPN1P07384 714 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 ACAA1P09110 424 aaPredicted RBP5.41□□□□□ -1.54
VPS41-209ENST00000457055 C1SP09871 688 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 SUPT20HL2P0C7V6 817 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 FDPSP14324 419 aaKnown RBP5.41□□□□□ -1.54
VPS41-209ENST00000457055 ETS1P14921 441 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 JUPP14923 745 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 AHCYP23526 432 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms