RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 NR1D2Q14995 579 aa23.77■■□□□ 1.4
MRPL28-205ENST00000447696 SLC1A5Q15758 541 aa23.77■■□□□ 1.4
MRPL28-205ENST00000447696 TBC1D25Q3MII6 688 aa23.77■■□□□ 1.4
MRPL28-205ENST00000447696 ZDHHC20Q5W0Z9 365 aa23.77■■□□□ 1.4
MRPL28-205ENST00000447696 ALS2CLQ60I27 953 aa23.77■■□□□ 1.4
MRPL28-205ENST00000447696 AADACL2Q6P093 401 aa23.77■■□□□ 1.4
MRPL28-205ENST00000447696 TTC13Q8NBP0 860 aa23.77■■□□□ 1.4
MRPL28-205ENST00000447696 IPMKQ8NFU5 416 aa23.77■■□□□ 1.4
MRPL28-205ENST00000447696 HES6Q96HZ4 224 aa23.77■■□□□ 1.4
MRPL28-205ENST00000447696 PPP1R2P1Q96PQ5 205 aa23.77■■□□□ 1.4
MRPL28-205ENST00000447696 FSD1LQ9BXM9 530 aa23.77■■□□□ 1.4
MRPL28-205ENST00000447696 CARD9Q9H257 536 aa23.77■■□□□ 1.4
MRPL28-205ENST00000447696 ADGRG1Q9Y653 693 aa23.77■■□□□ 1.4
MRPL28-205ENST00000447696 DDX3YO15523 660 aaKnown RBP23.76■■□□□ 1.39
MRPL28-205ENST00000447696 DARS2Q6PI48 645 aaKnown RBP23.76■■□□□ 1.39
MRPL28-205ENST00000447696 NAGSQ8N159 534 aa23.76■■□□□ 1.39
MRPL28-205ENST00000447696 TTC30BQ8N4P2 665 aa23.76■■□□□ 1.39
MRPL28-205ENST00000447696 CCDC112Q8NEF3 446 aa23.76■■□□□ 1.39
MRPL28-205ENST00000447696 DTX3LQ8TDB6 740 aa23.76■■□□□ 1.39
MRPL28-205ENST00000447696 FGF11Q92914 225 aa23.76■■□□□ 1.39
MRPL28-205ENST00000447696 LIN37Q96GY3 246 aaPredicted RBP23.76■■□□□ 1.39
MRPL28-205ENST00000447696 ZNF578Q96N58 590 aaPredicted RBP23.76■■□□□ 1.39
MRPL28-205ENST00000447696 PRORYQ9H606 182 aa23.76■■□□□ 1.39
MRPL28-205ENST00000447696 C10orf88Q9H8K7 445 aa23.76■■□□□ 1.39
MRPL28-205ENST00000447696 ZNHIT2Q9UHR6 403 aa23.76■■□□□ 1.39
MRPL28-205ENST00000447696 PLEKHM1Q9Y4G2 1056 aa23.76■■□□□ 1.39
MRPL28-205ENST00000447696 PCDHGA8Q9Y5G5 932 aa23.76■■□□□ 1.39
MRPL28-205ENST00000447696 CAPN6Q9Y6Q1 641 aa23.76■■□□□ 1.39
MRPL28-205ENST00000447696 F5H423 210 aaPredicted RBP23.75■■□□□ 1.39
MRPL28-205ENST00000447696 AURKAO14965 403 aa23.75■■□□□ 1.39
MRPL28-205ENST00000447696 CASC3O15234 703 aaKnown RBP23.75■■□□□ 1.39
MRPL28-205ENST00000447696 KCNN4O15554 427 aa23.75■■□□□ 1.39
MRPL28-205ENST00000447696 ARHGAP6O43182 974 aa23.75■■□□□ 1.39
MRPL28-205ENST00000447696 ZW10O43264 779 aa23.75■■□□□ 1.39
MRPL28-205ENST00000447696 TLX3O43711 291 aaPredicted RBP23.75■■□□□ 1.39
MRPL28-205ENST00000447696 NUAK1O60285 661 aa23.75■■□□□ 1.39
MRPL28-205ENST00000447696 SLC25A14O95258 325 aaPredicted RBP23.75■■□□□ 1.39
MRPL28-205ENST00000447696 ECEL1O95672 775 aa23.75■■□□□ 1.39
MRPL28-205ENST00000447696 PTMAP06454 111 aaKnown RBP23.75■■□□□ 1.39
MRPL28-205ENST00000447696 EIF2S3P41091 472 aaKnown RBP23.75■■□□□ 1.39
MRPL28-205ENST00000447696 MLLT3P42568 568 aaPredicted RBP23.75■■□□□ 1.39
MRPL28-205ENST00000447696 CHRNA4P43681 627 aa23.75■■□□□ 1.39
MRPL28-205ENST00000447696 MAZP56270 477 aaKnown RBP23.75■■□□□ 1.39
MRPL28-205ENST00000447696 ERVPABLB-1P60509 514 aa23.75■■□□□ 1.39
MRPL28-205ENST00000447696 CLPPQ16740 277 aaPredicted RBP23.75■■□□□ 1.39
MRPL28-205ENST00000447696 ANKRD20A2Q5SQ80 823 aa23.75■■□□□ 1.39
MRPL28-205ENST00000447696 ANKRD20A1Q5TYW2 823 aa23.75■■□□□ 1.39
MRPL28-205ENST00000447696 ANKRD20A3Q5VUR7 823 aa23.75■■□□□ 1.39
MRPL28-205ENST00000447696 PHYKPLQ8IUZ5 450 aa23.75■■□□□ 1.39
MRPL28-205ENST00000447696 ARL14Q8N4G2 192 aa23.75■■□□□ 1.39
MRPL28-205ENST00000447696 GLYATL1Q969I3 302 aa23.75■■□□□ 1.39
MRPL28-205ENST00000447696 CRELD1Q96HD1 420 aa23.75■■□□□ 1.39
MRPL28-205ENST00000447696 SPATA13Q96N96 652 aa23.75■■□□□ 1.39
MRPL28-205ENST00000447696 TMEM74Q96NL1 305 aa23.75■■□□□ 1.39
MRPL28-205ENST00000447696 VPS35Q96QK1 796 aa23.75■■□□□ 1.39
MRPL28-205ENST00000447696 GORASP1Q9BQQ3 440 aa23.75■■□□□ 1.39
MRPL28-205ENST00000447696 TRIM39Q9HCM9 518 aa23.75■■□□□ 1.39
MRPL28-205ENST00000447696 PACSIN2Q9UNF0 486 aaPredicted RBP23.75■■□□□ 1.39
MRPL28-205ENST00000447696 AAR2Q9Y312 384 aaKnown RBP23.75■■□□□ 1.39
MRPL28-205ENST00000447696 ARHGEF17Q96PE2 2063 aaPredicted RBP23.75■■□□□ 1.39
MRPL28-205ENST00000447696 CCDC187A0A096LP49 1063 aa23.74■■□□□ 1.39
MRPL28-205ENST00000447696 RHPN2P1A8MT19 583 aa23.74■■□□□ 1.39
MRPL28-205ENST00000447696 KRT86O43790 486 aa23.74■■□□□ 1.39
MRPL28-205ENST00000447696 CCKBRP32239 447 aa23.74■■□□□ 1.39
MRPL28-205ENST00000447696 GPR3P46089 330 aa23.74■■□□□ 1.39
MRPL28-205ENST00000447696 EIF3IQ13347 325 aaKnown RBP23.74■■□□□ 1.39
MRPL28-205ENST00000447696 KLF1Q13351 362 aaPredicted RBP23.74■■□□□ 1.39
MRPL28-205ENST00000447696 PRPSAP1Q14558 356 aa23.74■■□□□ 1.39
MRPL28-205ENST00000447696 ZNF605Q86T29 641 aa23.74■■□□□ 1.39
MRPL28-205ENST00000447696 SLC25A41Q8N5S1 370 aa23.74■■□□□ 1.39
MRPL28-205ENST00000447696 Q8N9G6 341 aaPredicted RBP23.74■■□□□ 1.39
MRPL28-205ENST00000447696 WDR36Q8NI36 951 aaKnown RBP23.74■■□□□ 1.39
MRPL28-205ENST00000447696 FAM118BQ9BPY3 351 aa23.74■■□□□ 1.39
MRPL28-205ENST00000447696 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.74■■□□□ 1.39
MRPL28-205ENST00000447696 ATXN10Q9UBB4 475 aa23.74■■□□□ 1.39
MRPL28-205ENST00000447696 SATB2Q9UPW6 733 aa23.74■■□□□ 1.39
MRPL28-205ENST00000447696 PCYT1BQ9Y5K3 369 aaPredicted RBP23.74■■□□□ 1.39
MRPL28-205ENST00000447696 BPTFQ12830 3046 aa23.74■■□□□ 1.39
MRPL28-205ENST00000447696 MAST4O15021 2626 aa23.73■■□□□ 1.39
MRPL28-205ENST00000447696 A0A1W2PNU3 283 aaPredicted RBP23.73■■□□□ 1.39
MRPL28-205ENST00000447696 GRID2O43424 1007 aa23.73■■□□□ 1.39
MRPL28-205ENST00000447696 PPFIA2O75334 1257 aa23.73■■□□□ 1.39
MRPL28-205ENST00000447696 B4GALNT1Q00973 533 aa23.73■■□□□ 1.39
MRPL28-205ENST00000447696 C3orf38Q5JPI3 329 aa23.73■■□□□ 1.39
MRPL28-205ENST00000447696 GLT6D1Q7Z4J2 308 aa23.73■■□□□ 1.39
MRPL28-205ENST00000447696 STRADBQ9C0K7 418 aa23.73■■□□□ 1.39
MRPL28-205ENST00000447696 OR2AG1Q9H205 316 aa23.73■■□□□ 1.39
MRPL28-205ENST00000447696 ASCL3Q9NQ33 180 aa23.73■■□□□ 1.39
MRPL28-205ENST00000447696 IL17CQ9P0M4 197 aa23.73■■□□□ 1.39
MRPL28-205ENST00000447696 SCN8AQ9UQD0 1980 aa23.72■■□□□ 1.39
MRPL28-205ENST00000447696 VEGFDO43915 354 aa23.72■■□□□ 1.39
MRPL28-205ENST00000447696 C1QL1O75973 258 aa23.72■■□□□ 1.39
MRPL28-205ENST00000447696 PRB1P04280 392 aa23.72■■□□□ 1.39
MRPL28-205ENST00000447696 ZNF8P17098 575 aaPredicted RBP23.72■■□□□ 1.39
MRPL28-205ENST00000447696 PSMB4P28070 264 aa23.72■■□□□ 1.39
MRPL28-205ENST00000447696 ADRA1AP35348 466 aa23.72■■□□□ 1.39
MRPL28-205ENST00000447696 FASLGP48023 281 aa23.72■■□□□ 1.39
MRPL28-205ENST00000447696 CLCNKAP51800 687 aa23.72■■□□□ 1.39
MRPL28-205ENST00000447696 INHBCP55103 352 aa23.72■■□□□ 1.39
MRPL28-205ENST00000447696 BIRC2Q13490 618 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms