RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 BRAT1Q6PJG6 821 aa11.66□□□□□ -0.54
FN1-212ENST00000446046 NDC1Q9BTX1 674 aa11.66□□□□□ -0.54
FN1-212ENST00000446046 PIH1D1Q9NWS0 290 aaKnown RBP11.66□□□□□ -0.54
FN1-212ENST00000446046 ADGRE2Q9UHX3 823 aa11.66□□□□□ -0.54
FN1-212ENST00000446046 PCDHGB5Q9Y5G0 923 aa11.66□□□□□ -0.54
FN1-212ENST00000446046 KCNU1A8MYU2 1149 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 CLOCKO15516 846 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 SCN2BO60939 215 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 LAMP2P13473 410 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 ARFIP1P53367 373 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 RALGPS1Q5JS13 557 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 ZNF730Q6ZMV8 503 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 SLC4A11Q8NBS3 891 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 SLC9A7Q96T83 725 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 SEMA4AQ9H3S1 761 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 GTF2IRD1Q9UHL9 959 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 TFR2Q9UP52 801 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 TLR6Q9Y2C9 796 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 PHGDHO43175 533 aaKnown RBP11.65□□□□□ -0.54
FN1-212ENST00000446046 MMP8P22894 467 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 FAAP100Q0VG06 881 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 MYBPC3Q14896 1274 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 GKN2Q86XP6 184 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 SIX5Q8N196 739 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 ADCY4Q8NFM4 1077 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 KIAA1143Q96AT1 154 aaPredicted RBP11.65□□□□□ -0.54
FN1-212ENST00000446046 PDZD7Q9H5P4 517 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 C19orf25Q9UFG5 118 aaPredicted RBP11.65□□□□□ -0.54
FN1-212ENST00000446046 FBXO5Q9UKT4 447 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 LTBP3Q9NS15 1303 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 CHRNGP07510 517 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 ADRB2P07550 413 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 RAB2AP61019 212 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 SMCO1Q147U7 214 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 TCHHL1Q5QJ38 904 aaPredicted RBP11.65□□□□□ -0.54
FN1-212ENST00000446046 ZBTB2Q8N680 514 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 TMEM125Q96AQ2 219 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 HAVCR1Q96D42 359 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 TRMT13Q9NUP7 481 aaKnown RBP11.65□□□□□ -0.54
FN1-212ENST00000446046 CDH7Q9ULB5 785 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 CRYBG1Q9Y4K1 1723 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 A0A087WXM4 84 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 FFAR3O14843 346 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 GPR42O15529 346 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 AGR2O95994 175 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 NR2C1P13056 603 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 ARL2P36404 184 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 RPL38P63173 70 aaKnown RBP11.65□□□□□ -0.54
FN1-212ENST00000446046 SPIBQ01892 262 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 WDR45BQ5MNZ6 344 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 EEF1AKMT1Q8WVE0 214 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 SDHAF3Q9NRP4 125 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 ZMYND8Q9ULU4 1186 aaPredicted RBP11.65□□□□□ -0.54
FN1-212ENST00000446046 N4BP2Q86UW6 1770 aaPredicted RBP11.65□□□□□ -0.54
FN1-212ENST00000446046 CHST10O43529 356 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 CCKBRP32239 447 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 ADRA1BP35368 520 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 MAPK12P53778 367 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 NAGLUP54802 743 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 SEC13P55735 322 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 ZNF57Q68EA5 555 aaPredicted RBP11.65□□□□□ -0.54
FN1-212ENST00000446046 SULT1C3Q6IMI6 304 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 GPR152Q8TDT2 470 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 ING5Q8WYH8 240 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 GSDMCQ9BYG8 508 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 NUAK2Q9H093 628 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 DLGAP2Q9P1A6 1054 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 BTBD3Q9Y2F9 522 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 TRBC1P01850 177 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 MLLT3P42568 568 aaPredicted RBP11.65□□□□□ -0.54
FN1-212ENST00000446046 MAXP61244 160 aa11.65□□□□□ -0.54
FN1-212ENST00000446046 CPSF6Q16630 551 aaKnown RBP eCLIP11.65□□□□□ -0.54
FN1-212ENST00000446046 hCG_1818297A0A087WSY0 165 aa11.65□□□□□ -0.55
FN1-212ENST00000446046 KERAO60938 352 aa11.65□□□□□ -0.55
FN1-212ENST00000446046 KHDRBS3O75525 346 aaKnown RBP11.65□□□□□ -0.55
FN1-212ENST00000446046 ITGA2BP08514 1039 aa11.65□□□□□ -0.55
FN1-212ENST00000446046 CCR8P51685 355 aa11.65□□□□□ -0.55
FN1-212ENST00000446046 DNASE1L2Q92874 299 aa11.65□□□□□ -0.55
FN1-212ENST00000446046 RFKQ969G6 155 aa11.65□□□□□ -0.55
FN1-212ENST00000446046 MYOCQ99972 504 aa11.65□□□□□ -0.55
FN1-212ENST00000446046 NOD2Q9HC29 1040 aa11.65□□□□□ -0.55
FN1-212ENST00000446046 NUDT4Q9NZJ9 180 aa11.65□□□□□ -0.55
FN1-212ENST00000446046 CRNNQ9UBG3 495 aaPredicted RBP11.65□□□□□ -0.55
FN1-212ENST00000446046 STXBP5LQ9Y2K9 1186 aa11.65□□□□□ -0.55
FN1-212ENST00000446046 NFAT5O94916 1531 aa11.65□□□□□ -0.55
FN1-212ENST00000446046 OR10H3O60404 316 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 SLC22A3O75751 556 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 WFS1O76024 890 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 FAM163BP0C2L3 166 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 MTHFRP42898 656 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 NOMO3P69849 1222 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 RASGEF1BQ0VAM2 473 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 NDUFA5Q16718 116 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 LIX1Q8N485 282 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 PCED1BQ96HM7 432 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 HOPXQ9BPY8 73 aaPredicted RBP11.64□□□□□ -0.55
FN1-212ENST00000446046 C1orf50Q9BV19 199 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 SPATA2Q9UM82 520 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 PLIN4Q96Q06 1357 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 AZIN1O14977 448 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms