RNA–Protein interactions for RNA: ENST00000442265.2

IRF3-204, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-204ENST00000442265 FECHP22830 423 aa16.4■□□□□ 0.22
IRF3-204ENST00000442265 CD82P27701 267 aa16.4■□□□□ 0.22
IRF3-204ENST00000442265 CD68P34810 354 aaPredicted RBP16.4■□□□□ 0.22
IRF3-204ENST00000442265 ETV5P41161 510 aa16.4■□□□□ 0.22
IRF3-204ENST00000442265 CFHR1Q03591 330 aa16.4■□□□□ 0.22
IRF3-204ENST00000442265 PHF19Q5T6S3 580 aa16.4■□□□□ 0.22
IRF3-204ENST00000442265 ARHGAP40Q5TG30 622 aa16.4■□□□□ 0.22
IRF3-204ENST00000442265 IYDQ6PHW0 289 aa16.4■□□□□ 0.22
IRF3-204ENST00000442265 USP53Q70EK8 1073 aa16.4■□□□□ 0.22
IRF3-204ENST00000442265 CHST15Q7LFX5 561 aaPredicted RBP16.4■□□□□ 0.22
IRF3-204ENST00000442265 CALR3Q96L12 384 aaKnown RBP16.4■□□□□ 0.22
IRF3-204ENST00000442265 CCNL2Q96S94 520 aaPredicted RBP16.4■□□□□ 0.22
IRF3-204ENST00000442265 VAT1Q99536 393 aa16.4■□□□□ 0.22
IRF3-204ENST00000442265 TRIM39Q9HCM9 518 aa16.4■□□□□ 0.22
IRF3-204ENST00000442265 AKAP7Q9P0M2 348 aaPredicted RBP16.4■□□□□ 0.22
IRF3-204ENST00000442265 TBC1D29Q9UFV1 150 aa16.4■□□□□ 0.22
IRF3-204ENST00000442265 ZNF711Q9Y462 761 aa16.4■□□□□ 0.22
IRF3-204ENST00000442265 TENM4Q6N022 2769 aa16.4■□□□□ 0.22
IRF3-204ENST00000442265 SCN8AQ9UQD0 1980 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 PRR19A6NJB7 356 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 EFSO43281 561 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 C1QL1O75973 258 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 THRAP10827 490 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 LIPCP11150 499 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 TNNT1P13805 278 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 BIRC2Q13490 618 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 PPP2R5EQ16537 467 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 ZNF569Q5MCW4 686 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 FAM182AQ5T1J6 154 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 CCDC70Q6NSX1 233 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 KDELC1Q6UW63 502 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 B4GALNT4Q76KP1 1039 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 KDELC2Q7Z4H8 507 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 DTX1Q86Y01 620 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 JAMLQ86YT9 394 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 TTC9Q92623 222 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 P3H4Q92791 437 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 GLYATL1Q969I3 302 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 PLEKHG4BQ96PX9 1271 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 PANX2Q96RD6 677 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 HERPUD2Q9BSE4 406 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 SPATA16Q9BXB7 569 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 GOLPH3Q9H4A6 298 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 TRABDQ9H4I3 376 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 LUC7LQ9NQ29 371 aaKnown RBP16.39■□□□□ 0.21
IRF3-204ENST00000442265 KCNK4Q9NYG8 393 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.39■□□□□ 0.21
IRF3-204ENST00000442265 ATXN10Q9UBB4 475 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 FAM153AQ9UHL3 310 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 SHOC2Q9UQ13 582 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 PRKAB1Q9Y478 270 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 PCDHGA3Q9Y5H0 932 aa16.39■□□□□ 0.21
IRF3-204ENST00000442265 KIR2DS5A0A0G2JLQ3 304 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 PRAMEF33A0A0G2JMD5 474 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 A0A0G2JNG1 304 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 OR5K4A6NMS3 321 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 HACD1B0YJ81 288 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 C9orf172C9J069 976 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 KIR2DS3K7RE56 304 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 GRID2O43424 1007 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 PRAMEF10O60809 474 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 SLC25A14O95258 325 aaPredicted RBP16.38■□□□□ 0.21
IRF3-204ENST00000442265 PIRTP0C851 137 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 F3P13726 295 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 SLC2A4P14672 509 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 ZNF8P17098 575 aaPredicted RBP16.38■□□□□ 0.21
IRF3-204ENST00000442265 BPIP17213 487 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 CSF2RBP32927 897 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 HMGCLP35914 325 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 COPS2P61201 443 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 KIR2DS5Q14953 304 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 SPA17Q15506 151 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 PCSK7Q16549 785 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 TMEM71Q6P5X7 295 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 WDR74Q6RFH5 385 aaPredicted RBP16.38■□□□□ 0.21
IRF3-204ENST00000442265 CCDC81Q6ZN84 652 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 BBS12Q6ZW61 710 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 USP7Q93009 1102 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 SH3KBP1Q96B97 665 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 MRFAP1L1Q96HT8 127 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 RBM41Q96IZ5 413 aaKnown RBP16.38■□□□□ 0.21
IRF3-204ENST00000442265 CCDC74BQ96LY2 380 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 QKIQ96PU8 341 aaKnown RBP eCLIP16.38■□□□□ 0.21
IRF3-204ENST00000442265 VPS35Q96QK1 796 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 FCRL5Q96RD9 977 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 GPR63Q9BZJ6 419 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 EFR3BQ9Y2G0 817 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.38■□□□□ 0.21
IRF3-204ENST00000442265 SPO11Q9Y5K1 396 aa16.38■□□□□ 0.21
IRF3-204ENST00000442265 VEGFDO43915 354 aa16.37■□□□□ 0.21
IRF3-204ENST00000442265 PMPCBO75439 489 aa16.37■□□□□ 0.21
IRF3-204ENST00000442265 FGF3P11487 239 aaPredicted RBP16.37■□□□□ 0.21
IRF3-204ENST00000442265 CCL4P13236 92 aa16.37■□□□□ 0.21
IRF3-204ENST00000442265 NFKB1P19838 968 aa16.37■□□□□ 0.21
IRF3-204ENST00000442265 CYLC1P35663 651 aaPredicted RBP16.37■□□□□ 0.21
IRF3-204ENST00000442265 MARCKSL1P49006 195 aa16.37■□□□□ 0.21
IRF3-204ENST00000442265 EPHA4P54764 986 aa16.37■□□□□ 0.21
IRF3-204ENST00000442265 WNT3AP56704 352 aa16.37■□□□□ 0.21
IRF3-204ENST00000442265 HHEXQ03014 270 aa16.37■□□□□ 0.21
IRF3-204ENST00000442265 XRCC4Q13426 336 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms