RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 NXNL2Q5VZ03 156 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 ESRP1Q6NXG1 681 aaKnown RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 STRADAQ7RTN6 431 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 BPHLQ86WA6 291 aaPredicted RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 ZDHHC13Q8IUH4 622 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 WDR49Q8IV35 697 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 LYSMD2Q8IV50 215 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 TBC1D21Q8IYX1 336 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 FAM86B1Q8N7N1 296 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 DNERQ8NFT8 737 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 OR52K2Q8NGK3 314 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 OR6Q1Q8NGQ2 317 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 STYXQ8WUJ0 223 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 PCNPQ8WW12 178 aaKnown RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 NSMCE2Q96MF7 247 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 TBCBQ99426 244 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 BDH2Q9BUT1 245 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 XYLT2Q9H1B5 865 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 RERGLQ9H628 205 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 GPN2Q9H9Y4 310 aaPredicted RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 ZBTB20Q9HC78 741 aaPredicted RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 MAT2BQ9NZL9 334 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 NOSIPQ9Y314 301 aaKnown RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 ZCWPW2A0A1B0GU75 182 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 SLC12A8A0AV02 714 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 GRXCR2A6NFK2 248 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 A8MX80 341 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 PIP5K1BO14986 540 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 GSTA4O15217 222 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 RGS5O15539 181 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 UGT2B11O75310 529 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 H2AFYO75367 372 aaKnown RBP7.49□□□□□ -1.21
HDAC9-214ENST00000441542 LYPLA2O95372 231 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 CPNE6O95741 557 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 CAPNS1P04632 268 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 CYBBP04839 570 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 PRKCBP05771 671 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 LCKP06239 509 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 ABCB1P08183 1280 aaPredicted RBP7.49□□□□□ -1.21
HDAC9-214ENST00000441542 SLC6A2P23975 617 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 CD68P34810 354 aaPredicted RBP7.49□□□□□ -1.21
HDAC9-214ENST00000441542 HTR2BP41595 481 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 YWHAHQ04917 246 aaPredicted RBP7.49□□□□□ -1.21
HDAC9-214ENST00000441542 DAG1Q14118 895 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 AASDHQ4L235 1098 aaPredicted RBP7.49□□□□□ -1.21
HDAC9-214ENST00000441542 ZNF789Q5FWF6 425 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 ZC3HC1Q86WB0 502 aaKnown RBP7.49□□□□□ -1.21
HDAC9-214ENST00000441542 FLCNQ8NFG4 579 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 OR6B3Q8NGW1 331 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 LILRB1Q8NHL6 650 aaPredicted RBP7.49□□□□□ -1.21
HDAC9-214ENST00000441542 LRRC58Q96CX6 371 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 CCDC120Q96HB5 630 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 MAP6Q96JE9 813 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 C1orf74Q96LT6 269 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 NSUN5Q96P11 429 aaKnown RBP7.49□□□□□ -1.21
HDAC9-214ENST00000441542 IL22Q9GZX6 179 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 PRM3Q9NNZ6 103 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 PAK1IP1Q9NWT1 392 aaPredicted RBP7.49□□□□□ -1.21
HDAC9-214ENST00000441542 ERVK13-1Q9NX77 482 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 TOR4AQ9NXH8 423 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 LIMD1Q9UGP4 676 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 RIPK3Q9Y572 518 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 CNTNAP4Q9C0A0 1308 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 A8MT66 165 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 MYO1GB0I1T2 1018 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 CNTN5O94779 1100 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 MT-CYBP00156 380 aaPredicted RBP7.49□□□□□ -1.21
HDAC9-214ENST00000441542 APOA1P02647 267 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 SULT1E1P49888 294 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 ZNF135P52742 658 aaPredicted RBP7.49□□□□□ -1.21
HDAC9-214ENST00000441542 GNG2P59768 71 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 RAB10P61026 200 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 CNTN2Q02246 1040 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 EMX1Q04741 257 aaPredicted RBP7.49□□□□□ -1.21
HDAC9-214ENST00000441542 TRAF3Q13114 568 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 GTF2H3Q13889 308 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 HIST2H2ACQ16777 129 aaPredicted RBP7.49□□□□□ -1.21
HDAC9-214ENST00000441542 SOWAHAQ2M3V2 549 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 PAGE3Q5JUK9 113 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 PXDC1Q5TGL8 231 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 CTU1Q7Z7A3 348 aaKnown RBP7.49□□□□□ -1.21
HDAC9-214ENST00000441542 CLEC14AQ86T13 490 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 MFSD6LQ8IWD5 586 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 TRIM48Q8IWZ4 208 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 PACRGLQ8N7B6 248 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 CHDHQ8NE62 594 aaPredicted RBP7.49□□□□□ -1.21
HDAC9-214ENST00000441542 OR13J1Q8NGT2 312 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 ITFG1Q8TB96 612 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 CLEC4DQ8WXI8 215 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 FKBP10Q96AY3 582 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 RTP4Q96DX8 246 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 C19orf60Q96EN9 201 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 UHRF1Q96T88 793 aaPredicted RBP7.49□□□□□ -1.21
HDAC9-214ENST00000441542 TMEM39BQ9GZU3 492 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 RUBCNLQ9H714 662 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 RPF1Q9H9Y2 349 aaKnown RBP7.49□□□□□ -1.21
HDAC9-214ENST00000441542 THG1LQ9NWX6 298 aaKnown RBP7.49□□□□□ -1.21
HDAC9-214ENST00000441542 SATB2Q9UPW6 733 aa7.49□□□□□ -1.21
HDAC9-214ENST00000441542 EIF3LQ9Y262 564 aaKnown RBP7.49□□□□□ -1.21
HDAC9-214ENST00000441542 TMX2Q9Y320 296 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms