RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 CMAHPQ9Y471 501 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 PCDHGB1Q9Y5G3 927 aa4.83□□□□□ -1.64
PFDN4-202ENST00000441080 RSF1Q96T23 1441 aaPredicted RBP4.82□□□□□ -1.64
PFDN4-202ENST00000441080 A0A0G2JPF8 293 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 hCG_1807616A0A1W2PRN6 198 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 MAGEA13PA6NCF6 341 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 C4orf47A7E2U8 309 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 HNRNPCL2B2RXH8 293 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 B4DLN1 442 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 HNRNPCL3B7ZW38 293 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 ACOT8O14734 319 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 CSH1P0DML2 217 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 CSH2P0DML3 217 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 HNRNPCL4P0DMR1 293 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 MSH2P43246 934 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 MRPL12P52815 198 aaKnown RBP4.82□□□□□ -1.64
PFDN4-202ENST00000441080 MYLK3Q32MK0 819 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 RAB41Q5JT25 222 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 NSUN5P2Q63ZY6 315 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 TMEM198Q66K66 360 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 PAPD4Q6PIY7 484 aaKnown RBP4.82□□□□□ -1.64
PFDN4-202ENST00000441080 PRSS57Q6UWY2 283 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 CCDC190Q86UF4 302 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 SFR1Q86XK3 245 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 ODF3L1Q8IXM7 274 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 ACVR1CQ8NER5 493 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 TRPC4APQ8TEL6 797 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 FIG4Q92562 907 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 SAT2Q96F10 170 aaPredicted RBP4.82□□□□□ -1.64
PFDN4-202ENST00000441080 CALML4Q96GE6 196 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 CCDC34Q96HJ3 373 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 IGSF21Q96ID5 467 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 C1QTNF1Q9BXJ1 281 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 PADI1Q9ULC6 663 aa4.82□□□□□ -1.64
PFDN4-202ENST00000441080 PDS5AQ29RF7 1337 aaKnown RBP4.81□□□□□ -1.64
PFDN4-202ENST00000441080 SAA2-SAA4A0A096LPE2 208 aa4.81□□□□□ -1.64
PFDN4-202ENST00000441080 A0A1W2PQ09 198 aa4.81□□□□□ -1.64
PFDN4-202ENST00000441080 CLGNO14967 610 aa4.81□□□□□ -1.64
PFDN4-202ENST00000441080 SMAD9O15198 467 aaKnown RBP4.81□□□□□ -1.64
PFDN4-202ENST00000441080 KCNN4O15554 427 aa4.81□□□□□ -1.64
PFDN4-202ENST00000441080 GJB3O75712 270 aa4.81□□□□□ -1.64
PFDN4-202ENST00000441080 TGFB3P10600 412 aa4.81□□□□□ -1.64
PFDN4-202ENST00000441080 PORP16435 677 aaPredicted RBP4.81□□□□□ -1.64
PFDN4-202ENST00000441080 UGT1A1P22309 533 aa4.81□□□□□ -1.64
PFDN4-202ENST00000441080 GCH1P30793 250 aa4.81□□□□□ -1.64
PFDN4-202ENST00000441080 CORO1AP31146 461 aaKnown RBP4.81□□□□□ -1.64
PFDN4-202ENST00000441080 CCKBRP32239 447 aa4.81□□□□□ -1.64
PFDN4-202ENST00000441080 GNL1P36915 607 aaPredicted RBP4.81□□□□□ -1.64
PFDN4-202ENST00000441080 SLC15A1P46059 708 aa4.81□□□□□ -1.64
PFDN4-202ENST00000441080 MFAP4P55083 255 aa4.81□□□□□ -1.64
PFDN4-202ENST00000441080 CLDN20P56880 219 aa4.81□□□□□ -1.64
PFDN4-202ENST00000441080 SLC20A2Q08357 652 aa4.81□□□□□ -1.64
PFDN4-202ENST00000441080 HNRNPA0Q13151 305 aaKnown RBP4.81□□□□□ -1.64
PFDN4-202ENST00000441080 RARS2Q5T160 578 aaKnown RBP4.81□□□□□ -1.64
PFDN4-202ENST00000441080 C18orf63Q68DL7 685 aa4.81□□□□□ -1.64
PFDN4-202ENST00000441080 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.81□□□□□ -1.649e-8■□□□□ 10.9
PFDN4-202ENST00000441080 EPHX4Q8IUS5 362 aa4.81□□□□□ -1.64
PFDN4-202ENST00000441080 RNF113BQ8IZP6 322 aaKnown RBP4.81□□□□□ -1.64
PFDN4-202ENST00000441080 TAGAPQ8N103 731 aa4.81□□□□□ -1.64
PFDN4-202ENST00000441080 KCNH5Q8NCM2 988 aa4.81□□□□□ -1.64
PFDN4-202ENST00000441080 THAP6Q8TBB0 222 aa4.81□□□□□ -1.64
PFDN4-202ENST00000441080 DNAAF4Q8WXU2 420 aa4.81□□□□□ -1.64
PFDN4-202ENST00000441080 ABTB1Q969K4 478 aaPredicted RBP4.81□□□□□ -1.64
PFDN4-202ENST00000441080 DUX5Q96PT3 197 aa4.81□□□□□ -1.64
PFDN4-202ENST00000441080 SMC6Q96SB8 1091 aa4.81□□□□□ -1.64
PFDN4-202ENST00000441080 PCYT2Q99447 389 aa4.81□□□□□ -1.64
PFDN4-202ENST00000441080 C1QTNF4Q9BXJ3 329 aa4.81□□□□□ -1.64
PFDN4-202ENST00000441080 TMEM39BQ9GZU3 492 aa4.81□□□□□ -1.64
PFDN4-202ENST00000441080 SUCLA2Q9P2R7 463 aaPredicted RBP4.81□□□□□ -1.64
PFDN4-202ENST00000441080 PTPRCP08575 1304 aa4.8□□□□□ -1.64
PFDN4-202ENST00000441080 FAM90A26D6RGX4 464 aa4.8□□□□□ -1.64
PFDN4-202ENST00000441080 K7ENM7 598 aa4.8□□□□□ -1.64
PFDN4-202ENST00000441080 ANKRD28O15084 1053 aa4.8□□□□□ -1.64
PFDN4-202ENST00000441080 RELQ04864 619 aaPredicted RBP4.8□□□□□ -1.64
PFDN4-202ENST00000441080 EPS8Q12929 822 aa4.8□□□□□ -1.64
PFDN4-202ENST00000441080 ZBTB17Q13105 803 aa4.8□□□□□ -1.64
PFDN4-202ENST00000441080 CAPRIN2Q6IMN6 1127 aaKnown RBP4.8□□□□□ -1.64
PFDN4-202ENST00000441080 LCN10Q6JVE6 187 aa4.8□□□□□ -1.64
PFDN4-202ENST00000441080 CLEC4GQ6UXB4 293 aa4.8□□□□□ -1.64
PFDN4-202ENST00000441080 ARID3BQ8IVW6 561 aaPredicted RBP4.8□□□□□ -1.64
PFDN4-202ENST00000441080 C1orf87Q8N0U7 546 aa4.8□□□□□ -1.64
PFDN4-202ENST00000441080 RBMXL3Q8N7X1 1067 aaKnown RBP4.8□□□□□ -1.64
PFDN4-202ENST00000441080 ZNF441Q8N8Z8 693 aa4.8□□□□□ -1.64
PFDN4-202ENST00000441080 OR5R1Q8NH85 324 aa4.8□□□□□ -1.64
PFDN4-202ENST00000441080 LMO3Q8TAP4 145 aa4.8□□□□□ -1.64
PFDN4-202ENST00000441080 SLC20A1Q8WUM9 679 aa4.8□□□□□ -1.64
PFDN4-202ENST00000441080 SLC38A5Q8WUX1 472 aa4.8□□□□□ -1.64
PFDN4-202ENST00000441080 PIGTQ969N2 578 aa4.8□□□□□ -1.64
PFDN4-202ENST00000441080 DDX31Q9H8H2 851 aaKnown RBP4.8□□□□□ -1.64
PFDN4-202ENST00000441080 TMEM30AQ9NV96 361 aa4.8□□□□□ -1.64
PFDN4-202ENST00000441080 PAG1Q9NWQ8 432 aa4.8□□□□□ -1.64
PFDN4-202ENST00000441080 PCDHGB4Q9UN71 923 aa4.8□□□□□ -1.64
PFDN4-202ENST00000441080 TMEM5Q9Y2B1 443 aa4.8□□□□□ -1.64
PFDN4-202ENST00000441080 ARHGEF40Q8TER5 1519 aa4.8□□□□□ -1.64
PFDN4-202ENST00000441080 IGHV4OR15-8A0A075B7B6 117 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 DENND3A2RUS2 1198 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 ZNF587BE7ETH6 402 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 CTDSP2O14595 271 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 SLC16A5O15375 505 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 AHCYL1O43865 530 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms