RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 NDUFB5O43674 189 aa11.83□□□□□ -0.51
LTBR-203ENST00000441074 NTRK1P04629 796 aa11.83□□□□□ -0.51
LTBR-203ENST00000441074 MTHFD1P11586 935 aaKnown RBP11.83□□□□□ -0.51
LTBR-203ENST00000441074 CAPN3P20807 821 aa11.83□□□□□ -0.51
LTBR-203ENST00000441074 CD68P34810 354 aaPredicted RBP11.83□□□□□ -0.51
LTBR-203ENST00000441074 GABARAPL2P60520 117 aa11.83□□□□□ -0.51
LTBR-203ENST00000441074 CDC20Q12834 499 aa11.83□□□□□ -0.51
LTBR-203ENST00000441074 CDH17Q12864 832 aa11.83□□□□□ -0.51
LTBR-203ENST00000441074 CAPRIN1Q14444 709 aaKnown RBP11.83□□□□□ -0.51
LTBR-203ENST00000441074 POLD3Q15054 466 aaPredicted RBP11.83□□□□□ -0.51
LTBR-203ENST00000441074 FAM83EQ2M2I3 478 aa11.83□□□□□ -0.51
LTBR-203ENST00000441074 KIF19Q2TAC6 998 aa11.83□□□□□ -0.51
LTBR-203ENST00000441074 VPS26BQ4G0F5 336 aa11.83□□□□□ -0.51
LTBR-203ENST00000441074 TECRLQ5HYJ1 363 aa11.83□□□□□ -0.51
LTBR-203ENST00000441074 COQ5Q5HYK3 327 aa11.83□□□□□ -0.51
LTBR-203ENST00000441074 ITIH5Q86UX2 942 aa11.83□□□□□ -0.51
LTBR-203ENST00000441074 ZCCHC7Q8N3Z6 543 aaKnown RBP11.83□□□□□ -0.51
LTBR-203ENST00000441074 KLHDC9Q8NEP7 349 aa11.83□□□□□ -0.51
LTBR-203ENST00000441074 SLC22A17Q8WUG5 538 aa11.83□□□□□ -0.51
LTBR-203ENST00000441074 NT5C3BQ969T7 300 aa11.83□□□□□ -0.51
LTBR-203ENST00000441074 FAM149B1Q96BN6 582 aa11.83□□□□□ -0.51
LTBR-203ENST00000441074 ARMC5Q96C12 935 aa11.83□□□□□ -0.51
LTBR-203ENST00000441074 LRRC58Q96CX6 371 aa11.83□□□□□ -0.51
LTBR-203ENST00000441074 SLC9A7Q96T83 725 aa11.83□□□□□ -0.51
LTBR-203ENST00000441074 SLC30A3Q99726 388 aa11.83□□□□□ -0.51
LTBR-203ENST00000441074 APOL2Q9BQE5 337 aa11.83□□□□□ -0.51
LTBR-203ENST00000441074 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.83□□□□□ -0.51
LTBR-203ENST00000441074 ADNPQ9H2P0 1102 aa11.83□□□□□ -0.51
LTBR-203ENST00000441074 CYP4F12Q9HCS2 524 aa11.83□□□□□ -0.51
LTBR-203ENST00000441074 IGSF5Q9NSI5 407 aa11.83□□□□□ -0.51
LTBR-203ENST00000441074 TRHDEQ9UKU6 1024 aa11.83□□□□□ -0.51
LTBR-203ENST00000441074 BAG5Q9UL15 447 aa11.83□□□□□ -0.51
LTBR-203ENST00000441074 NOD1Q9Y239 953 aa11.83□□□□□ -0.51
LTBR-203ENST00000441074 SCN1AP35498 2009 aa11.83□□□□□ -0.52
LTBR-203ENST00000441074 F8W810 466 aa11.83□□□□□ -0.52
LTBR-203ENST00000441074 M0QZ92 97 aa11.83□□□□□ -0.52
LTBR-203ENST00000441074 KCNA5P22460 613 aa11.83□□□□□ -0.52
LTBR-203ENST00000441074 PNPLA4P41247 253 aa11.83□□□□□ -0.52
LTBR-203ENST00000441074 GSK3BP49841 420 aa11.83□□□□□ -0.52
LTBR-203ENST00000441074 ALDH3A2P51648 485 aa11.83□□□□□ -0.52
LTBR-203ENST00000441074 ACLYP53396 1101 aa11.83□□□□□ -0.52
LTBR-203ENST00000441074 TAS2R39P59534 338 aa11.83□□□□□ -0.52
LTBR-203ENST00000441074 CDC42EP1Q00587 391 aa11.83□□□□□ -0.52
LTBR-203ENST00000441074 ZIK1Q3SY52 487 aaPredicted RBP11.83□□□□□ -0.52
LTBR-203ENST00000441074 SNX29P2Q8IUI4 249 aa11.83□□□□□ -0.52
LTBR-203ENST00000441074 DENND6AQ8IWF6 608 aa11.83□□□□□ -0.52
LTBR-203ENST00000441074 SCML4Q8N228 414 aa11.83□□□□□ -0.52
LTBR-203ENST00000441074 PDZD8Q8NEN9 1154 aa11.83□□□□□ -0.52
LTBR-203ENST00000441074 ELMO2Q96JJ3 720 aa11.83□□□□□ -0.52
LTBR-203ENST00000441074 DEFB118Q96PH6 123 aa11.83□□□□□ -0.52
LTBR-203ENST00000441074 NPY6RQ99463 290 aa11.83□□□□□ -0.52
LTBR-203ENST00000441074 VAT1Q99536 393 aa11.83□□□□□ -0.52
LTBR-203ENST00000441074 TRMOQ9BU70 441 aa11.83□□□□□ -0.52
LTBR-203ENST00000441074 HOXD1Q9GZZ0 328 aa11.83□□□□□ -0.52
LTBR-203ENST00000441074 NACA2Q9H009 215 aa11.83□□□□□ -0.52
LTBR-203ENST00000441074 GDAP2Q9NXN4 497 aa11.83□□□□□ -0.52
LTBR-203ENST00000441074 KLQ9UEF7 1012 aa11.83□□□□□ -0.52
LTBR-203ENST00000441074 PADI3Q9ULW8 664 aa11.83□□□□□ -0.52
LTBR-203ENST00000441074 RANBP2P49792 3224 aaKnown RBP11.83□□□□□ -0.52
LTBR-203ENST00000441074 ATP6AP2A0A1C7CYW4 349 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 RGS13O14921 159 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 NUAK1O60285 661 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 ATP6AP2O75787 350 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 MT-CO1P00395 513 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 CD4P01730 458 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 THRBP10828 461 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 ITIH1P19827 911 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 ARSFP54793 590 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 IFITM2Q01629 132 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 ILF2Q12905 390 aaKnown RBP11.82□□□□□ -0.52
LTBR-203ENST00000441074 CTBP1Q13363 440 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 AASDHQ4L235 1098 aaPredicted RBP11.82□□□□□ -0.52
LTBR-203ENST00000441074 FBXO47Q5MNV8 452 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 OTUD1Q5VV17 481 aaPredicted RBP11.82□□□□□ -0.52
LTBR-203ENST00000441074 RPS27LQ71UM5 84 aaKnown RBP11.82□□□□□ -0.52
LTBR-203ENST00000441074 SLC22A16Q86VW1 577 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 ARMC8Q8IUR7 673 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 SLC22A9Q8IVM8 553 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 C8orf59Q8N0T1 100 aaPredicted RBP11.82□□□□□ -0.52
LTBR-203ENST00000441074 MIER2Q8N344 545 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 SGCDQ92629 289 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 NTAN1Q96AB6 310 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 TMEM125Q96AQ2 219 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 HDAC11Q96DB2 347 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 C19orf60Q96EN9 201 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 TXNDC15Q96J42 360 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 TNIP3Q96KP6 325 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 C3orf30Q96M34 536 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 TSPAN18Q96SJ8 248 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 TRIM54Q9BYV2 358 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 AKTIPQ9H8T0 292 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 CPNE5Q9HCH3 593 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 UBQLN1Q9UMX0 589 aaKnown RBP11.82□□□□□ -0.52
LTBR-203ENST00000441074 ANKRD34BA5PLL1 514 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 UBFD1O14562 309 aaKnown RBP11.82□□□□□ -0.52
LTBR-203ENST00000441074 PSMD3O43242 534 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 MATN4O95460 622 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 POMCP01189 267 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 HTR1AP08908 422 aa11.82□□□□□ -0.52
LTBR-203ENST00000441074 BMP4P12644 408 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms