RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 CCND3P30281 292 aaPredicted RBP13.46□□□□□ -0.26
HERPUD1-204ENST00000439977 SLC26A3P40879 764 aa13.46□□□□□ -0.26
HERPUD1-204ENST00000439977 FLT3LGP49771 235 aa13.46□□□□□ -0.26
HERPUD1-204ENST00000439977 LIPEQ05469 1076 aa13.46□□□□□ -0.26
HERPUD1-204ENST00000439977 OTUD3Q5T2D3 398 aaPredicted RBP13.46□□□□□ -0.26
HERPUD1-204ENST00000439977 BLOC1S3Q6QNY0 202 aa13.46□□□□□ -0.26
HERPUD1-204ENST00000439977 ANKFN1Q8N957 763 aa13.46□□□□□ -0.26
HERPUD1-204ENST00000439977 RIN3Q8TB24 985 aa13.46□□□□□ -0.26
HERPUD1-204ENST00000439977 TADA1Q96BN2 335 aa13.46□□□□□ -0.26
HERPUD1-204ENST00000439977 UHRF1Q96T88 793 aaPredicted RBP13.46□□□□□ -0.26
HERPUD1-204ENST00000439977 HOPXQ9BPY8 73 aaPredicted RBP13.46□□□□□ -0.26
HERPUD1-204ENST00000439977 ADI1Q9BV57 179 aa13.46□□□□□ -0.26
HERPUD1-204ENST00000439977 CLK4Q9HAZ1 481 aaKnown RBP13.46□□□□□ -0.26
HERPUD1-204ENST00000439977 ATXN10Q9UBB4 475 aa13.46□□□□□ -0.26
HERPUD1-204ENST00000439977 EBF1Q9UH73 591 aa13.46□□□□□ -0.26
HERPUD1-204ENST00000439977 GPR45Q9Y5Y3 372 aa13.46□□□□□ -0.26
HERPUD1-204ENST00000439977 KERAO60938 352 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 KATNA1O75449 491 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 PCNAP12004 261 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 STT3AP46977 705 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 MAPK10P53779 464 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 KCNK10P57789 538 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 RAD51Q06609 339 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 INPP5AQ14642 412 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 PARP15Q460N3 678 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 ZRANB3Q5FWF4 1079 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 SLC2A7Q6PXP3 512 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 HACD2Q6Y1H2 254 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 RNF19BQ6ZMZ0 732 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 C16orf59Q7L2K0 433 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 CLVS1Q8IUQ0 354 aaPredicted RBP13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 KIAA2013Q8IYS2 634 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 ADGRG5Q8IZF4 528 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 KIAA1191Q96A73 305 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 FEM1CQ96JP0 617 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 UROC1Q96N76 676 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 KCTD14Q9BQ13 255 aaPredicted RBP13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 ANKRD60Q9BZ19 345 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 TFB2MQ9H5Q4 396 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 TLR8Q9NR97 1041 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 ARMC1Q9NVT9 282 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 CD274Q9NZQ7 290 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 FKBPLQ9UIM3 349 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 NDST3O95803 873 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 PYGLP06737 847 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 ELNP15502 786 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 ITGB6P18564 788 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 IL12AP29459 219 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 GALK1P51570 392 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 SGSHP51688 502 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 HK3P52790 923 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 ATP6V0D1P61421 351 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 ACVR1Q04771 509 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 ZIK1Q3SY52 487 aaPredicted RBP13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 PABPC1LQ4VXU2 614 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 PYCR3Q53H96 274 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 CAMK1DQ8IU85 385 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 DENND1CQ8IV53 801 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 COLGALT2Q8IYK4 626 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 MINDY1Q8N5J2 469 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 FNDC5Q8NAU1 212 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 CCDC97Q96F63 343 aaPredicted RBP13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 C8orf48Q96LL4 319 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 AGPAT4Q9NRZ5 378 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 GID8Q9NWU2 228 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 ABCD2Q9UBJ2 740 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 CDC14AQ9UNH5 594 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 OAS3Q9Y6K5 1087 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 CROCCQ5TZA2 2017 aa13.45□□□□□ -0.26
HERPUD1-204ENST00000439977 KLHL33A6NCF5 533 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 CCDC154A6NI56 674 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 DRGXA6NNA5 263 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 F5H5T6 163 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 TMCC1O94876 653 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 HOXD9P28356 352 aaPredicted RBP13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 ATP4BP51164 291 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 FKBP1BP68106 108 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 MERTKQ12866 999 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 MBTPS1Q14703 1052 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 TAS2R42Q7RTR8 314 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 RHEBL1Q8TAI7 183 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 SOCS4Q8WXH5 440 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 LINC01599Q8WXQ3 324 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 TMEM125Q96AQ2 219 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 VPS50Q96JG6 964 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 PPM1MQ96MI6 270 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 CINPQ9BW66 212 aaPredicted RBP13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 ZFYVE28Q9HCC9 887 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 SLC52A3Q9NQ40 469 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 GKN1Q9NS71 199 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 MRGBPQ9NV56 204 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 PCDHA9Q9Y5H5 950 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 MAGED1Q9Y5V3 778 aaPredicted RBP13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 COMMD10Q9Y6G5 202 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 SQORQ9Y6N5 450 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 BBIP1A8MTZ0 92 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 IDO1P14902 403 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 GGT5P36269 586 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 PIK3CGP48736 1102 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 CTBSQ01459 385 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms