RNA–Protein interactions for RNA: ENST00000434411.5

SNHG20-202, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 2,143 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-202ENST00000434411 LIN52Q52LA3 116 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 VARS2Q5ST30 1063 aaKnown RBP12.1□□□□□ -0.47
SNHG20-202ENST00000434411 ANGPTL8Q6UXH0 198 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 MARK2Q7KZI7 788 aaKnown RBP12.1□□□□□ -0.47
SNHG20-202ENST00000434411 NUDCD3Q8IVD9 361 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 MPP5Q8N3R9 675 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 OR10T2Q8NGX3 314 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 ATP6V1E2Q96A05 226 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 C7orf26Q96N11 449 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 SERPINB11Q96P15 392 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 NMUR2Q9GZQ4 415 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 CDH19Q9H159 772 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 SMOC2Q9H3U7 446 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 RUBCNLQ9H714 662 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 ATP13A1Q9HD20 1204 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 C11orf16Q9NQ32 467 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 MRPL40Q9NQ50 206 aaKnown RBP12.1□□□□□ -0.47
SNHG20-202ENST00000434411 UCKL1Q9NWZ5 548 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 MRPL39Q9NYK5 338 aaKnown RBP12.1□□□□□ -0.47
SNHG20-202ENST00000434411 BFARQ9NZS9 450 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 SNX8Q9Y5X2 465 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 LRIG2O94898 1065 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 PAPLNO95428 1278 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 AP2A1O95782 977 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 ATP5BP06576 529 aaKnown RBP12.1□□□□□ -0.47
SNHG20-202ENST00000434411 SLC2A3P11169 496 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 GRK2P25098 689 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 PTPN3P26045 913 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 EIF2B2P49770 351 aaKnown RBP12.1□□□□□ -0.47
SNHG20-202ENST00000434411 ETV1P50549 477 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 FAM209BQ5JX69 171 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 SPANXN3Q5MJ09 141 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 MROH9Q5TGP6 573 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 TRMT10BQ6PF06 316 aaKnown RBP12.1□□□□□ -0.47
SNHG20-202ENST00000434411 RANBP10Q6VN20 620 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 GALNT13Q8IUC8 556 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 ARID3BQ8IVW6 561 aaPredicted RBP12.1□□□□□ -0.47
SNHG20-202ENST00000434411 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.1□□□□□ -0.47
SNHG20-202ENST00000434411 ZNF540Q8NDQ6 660 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 CEP19Q96LK0 163 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 WACQ9BTA9 647 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 GRIP2Q9C0E4 1043 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 LRRC40Q9H9A6 602 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 KCNK4Q9NYG8 393 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 EHD3Q9NZN3 535 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 AP3M1Q9Y2T2 418 aa12.1□□□□□ -0.47
SNHG20-202ENST00000434411 WDR27A2RRH5 827 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 FAM72CH0Y354 149 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 LINC01387J3KSC0 135 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 KCNK1O00180 336 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 CNOT3O75175 753 aaKnown RBP12.09□□□□□ -0.47
SNHG20-202ENST00000434411 XYLBO75191 536 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 ALDH1A2O94788 518 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 PIGNO95427 931 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 ECDO95905 644 aaPredicted RBP12.09□□□□□ -0.47
SNHG20-202ENST00000434411 C8AP07357 584 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 KITP10721 976 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 RPS2P15880 293 aaKnown RBP12.09□□□□□ -0.47
SNHG20-202ENST00000434411 HOXA9P31269 272 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 SESN2P58004 480 aaPredicted RBP12.09□□□□□ -0.47
SNHG20-202ENST00000434411 PPP2R5DQ14738 602 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 KPNB1Q14974 876 aaKnown RBP12.09□□□□□ -0.47
SNHG20-202ENST00000434411 SLC39A12Q504Y0 691 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 GRTP1Q5TC63 336 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 FAM72AQ5TYM5 149 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 NAPEPLDQ6IQ20 393 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 SLC8B1Q6J4K2 584 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 FAM72DQ6L9T8 149 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 RWDD4Q6NW29 188 aaKnown RBP12.09□□□□□ -0.47
SNHG20-202ENST00000434411 KCTD20Q7Z5Y7 419 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 LINC00523Q86TU6 105 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 TSPYL5Q86VY4 417 aaPredicted RBP12.09□□□□□ -0.47
SNHG20-202ENST00000434411 FAM72BQ86X60 149 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 DNAAF3Q8N9W5 541 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 PDZD8Q8NEN9 1154 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 ZNF461Q8TAF7 563 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 PALMDQ9NP74 551 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 TAS2R1Q9NYW7 299 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 PTTG2Q9NZH5 202 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 SIRPGQ9P1W8 387 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 STOML1Q9UBI4 398 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 PPARGC1AQ9UBK2 798 aaKnown RBP12.09□□□□□ -0.47
SNHG20-202ENST00000434411 SORCS3Q9UPU3 1222 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 HCN4Q9Y3Q4 1203 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 DOCK6Q96HP0 2047 aa12.09□□□□□ -0.47
SNHG20-202ENST00000434411 C1orf232A0A0U1RR37 186 aa12.08□□□□□ -0.47
SNHG20-202ENST00000434411 MAGEB16A2A368 324 aa12.08□□□□□ -0.47
SNHG20-202ENST00000434411 FUOMA2VDF0 154 aa12.08□□□□□ -0.47
SNHG20-202ENST00000434411 PFDN6O15212 129 aa12.08□□□□□ -0.47
SNHG20-202ENST00000434411 ADAM12O43184 909 aa12.08□□□□□ -0.47
SNHG20-202ENST00000434411 OAZ2O95190 189 aa12.08□□□□□ -0.47
SNHG20-202ENST00000434411 IGLV3-25P01717 112 aa12.08□□□□□ -0.47
SNHG20-202ENST00000434411 MGAT1P26572 445 aa12.08□□□□□ -0.47
SNHG20-202ENST00000434411 CPA2P48052 419 aa12.08□□□□□ -0.47
SNHG20-202ENST00000434411 PRAMEP78395 509 aa12.08□□□□□ -0.47
SNHG20-202ENST00000434411 OCRLQ01968 901 aa12.08□□□□□ -0.47
SNHG20-202ENST00000434411 SIGLEC14Q08ET2 396 aa12.08□□□□□ -0.47
SNHG20-202ENST00000434411 MRPL58Q14197 206 aaKnown RBP12.08□□□□□ -0.47
SNHG20-202ENST00000434411 NPTX1Q15818 432 aa12.08□□□□□ -0.47
SNHG20-202ENST00000434411 CTXN3Q4LDR2 81 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms