RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 HSFY1Q96LI6 401 aa16■□□□□ 0.15
C9orf3-206ENST00000428313 REXO4Q9GZR2 422 aaKnown RBP16■□□□□ 0.15
C9orf3-206ENST00000428313 MIR1-1HGQ9H1L0 117 aa16■□□□□ 0.15
C9orf3-206ENST00000428313 NGRNQ9NPE2 291 aaKnown RBP16■□□□□ 0.15
C9orf3-206ENST00000428313 TAS2R9Q9NYW1 312 aa16■□□□□ 0.15
C9orf3-206ENST00000428313 VANGL2Q9ULK5 521 aa16■□□□□ 0.15
C9orf3-206ENST00000428313 KCNH4Q9UQ05 1017 aa16■□□□□ 0.15
C9orf3-206ENST00000428313 FAM92AA1XBS5 289 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 TYW5A2RUC4 315 aaKnown RBP15.99■□□□□ 0.15
C9orf3-206ENST00000428313 ARHGEF15O94989 841 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 CD4P01730 458 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 RAP2AP10114 183 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 PSMB9P28065 219 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 CD6P30203 668 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 RAP1GAPP47736 663 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 GTF2A2P52657 109 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 KCNAB2Q13303 367 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 PARP15Q460N3 678 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 CACTIN-AS1Q8N1I8 211 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 BRSK1Q8TDC3 778 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 RBM4BQ9BQ04 359 aaKnown RBP15.99■□□□□ 0.15
C9orf3-206ENST00000428313 RBM4Q9BWF3 364 aaKnown RBP15.99■□□□□ 0.15
C9orf3-206ENST00000428313 DUSP21Q9H596 190 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 TNFRSF12AQ9NP84 129 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 RAPGEFL1Q9UHV5 662 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 TPRKBQ9Y3C4 175 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 PNMA8CA0A1B0GUJ8 204 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 LOC110117498-PIK3R3F6TDL0 507 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 G3V2T6 193 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 M0QYV0 167 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 NPM3O75607 178 aaKnown RBP15.99■□□□□ 0.15
C9orf3-206ENST00000428313 ITGA2P17301 1181 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 HRH2P25021 359 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 RAB10P61026 200 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 NDUFAF5Q5TEU4 345 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 NXNL2Q5VZ03 156 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 NCBP2-AS2Q69YL0 99 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 CYHR1Q6ZMK1 362 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 ZNF517Q6ZMY9 492 aaPredicted RBP15.99■□□□□ 0.15
C9orf3-206ENST00000428313 FAM183BPQ6ZVS7 135 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 KCTD20Q7Z5Y7 419 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 LIX1LQ8IVB5 337 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 SVOPLQ8N434 492 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 AMER2Q8N7J2 671 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 OR52K1Q8NGK4 314 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 LPAR1Q92633 364 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 PHOX2BQ99453 314 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 OMDQ99983 421 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 CCDC32Q9BV29 185 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 C6orf62Q9GZU0 229 aaPredicted RBP15.99■□□□□ 0.15
C9orf3-206ENST00000428313 NUAK2Q9H093 628 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 EHD3Q9NZN3 535 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 CCDC59Q9P031 241 aaKnown RBP15.99■□□□□ 0.15
C9orf3-206ENST00000428313 ERVK-18Q9QC07 812 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 ZMAT5Q9UDW3 170 aaKnown RBP15.99■□□□□ 0.15
C9orf3-206ENST00000428313 OAS3Q9Y6K5 1087 aaKnown RBP15.99■□□□□ 0.15
C9orf3-206ENST00000428313 ADAMTSL1Q8N6G6 1762 aa15.99■□□□□ 0.15
C9orf3-206ENST00000428313 LOC100130705A0A1B0GUX0 176 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 KRT87PA6NCN2 255 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 BET1O15155 118 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 ZNF780AO75290 641 aaPredicted RBP15.98■□□□□ 0.15
C9orf3-206ENST00000428313 USP12O75317 370 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 STBD1O95210 358 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 PCNAP12004 261 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 TGFBR2P37173 567 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 MAP2K4P45985 399 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 RPS5P46782 204 aaKnown RBP15.98■□□□□ 0.15
C9orf3-206ENST00000428313 GLUD2P49448 558 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 IFRD2Q12894 506 aaPredicted RBP15.98■□□□□ 0.15
C9orf3-206ENST00000428313 CDK5R2Q13319 367 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 DUOXA2Q1HG44 320 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 OR6B2Q6IFH4 312 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 CES5AQ6NT32 575 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 XKRXQ6PP77 449 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 ZNF767PQ75MW2 155 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 FAM160B2Q86V87 743 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 RAB43Q86YS6 212 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 TMEM199Q8N511 208 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 C8orf48Q96LL4 319 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 NSMCE2Q96MF7 247 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 APOL4Q9BPW4 351 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 MRIQ9BWK5 157 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 CASS4Q9NQ75 786 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 POLLQ9UGP5 575 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 BTBD3Q9Y2F9 522 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 PEX16Q9Y5Y5 336 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 A0A087X1B8 175 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 TRIM77I1YAP6 450 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 SLC16A6O15403 523 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 GDF11O95390 407 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 PGK1P00558 417 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 PGK2P07205 417 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 SDC4P31431 198 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 AVPR1AP37288 418 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 SLC9A3P48764 834 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 CXCR4P61073 352 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 SLC35A2P78381 396 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 PTPN11Q06124 597 aaPredicted RBP15.98■□□□□ 0.15
C9orf3-206ENST00000428313 GPR162Q16538 588 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 IFNEQ86WN2 208 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms