RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 ACTR1AP61163 376 aa17.72■□□□□ 0.43
IGHV3-47-201ENST00000425060 CCL7P80098 99 aa17.72■□□□□ 0.43
IGHV3-47-201ENST00000425060 OASLQ15646 514 aaKnown RBP17.72■□□□□ 0.43
IGHV3-47-201ENST00000425060 PARP6Q2NL67 630 aa17.72■□□□□ 0.43
IGHV3-47-201ENST00000425060 ATP13A5Q4VNC0 1218 aa17.72■□□□□ 0.43
IGHV3-47-201ENST00000425060 SEL1L2Q5TEA6 688 aa17.72■□□□□ 0.43
IGHV3-47-201ENST00000425060 ZDHHC20Q5W0Z9 365 aa17.72■□□□□ 0.43
IGHV3-47-201ENST00000425060 GLT6D1Q7Z4J2 308 aa17.72■□□□□ 0.43
IGHV3-47-201ENST00000425060 ZNF438Q7Z4V0 828 aa17.72■□□□□ 0.43
IGHV3-47-201ENST00000425060 ADGRG6Q86SQ4 1221 aa17.72■□□□□ 0.43
IGHV3-47-201ENST00000425060 ARL14Q8N4G2 192 aa17.72■□□□□ 0.43
IGHV3-47-201ENST00000425060 ATG4AQ8WYN0 398 aa17.72■□□□□ 0.43
IGHV3-47-201ENST00000425060 NXPE2Q96DL1 559 aa17.72■□□□□ 0.43
IGHV3-47-201ENST00000425060 PPP1R2P1Q96PQ5 205 aa17.72■□□□□ 0.43
IGHV3-47-201ENST00000425060 APOL2Q9BQE5 337 aa17.72■□□□□ 0.43
IGHV3-47-201ENST00000425060 TLR10Q9BXR5 811 aa17.72■□□□□ 0.43
IGHV3-47-201ENST00000425060 ARFGAP3Q9NP61 516 aa17.72■□□□□ 0.43
IGHV3-47-201ENST00000425060 LRIT1Q9P2V4 623 aa17.72■□□□□ 0.43
IGHV3-47-201ENST00000425060 PRKAB1Q9Y478 270 aa17.72■□□□□ 0.43
IGHV3-47-201ENST00000425060 APC2O95996 2303 aa17.71■□□□□ 0.43
IGHV3-47-201ENST00000425060 GOLGA6L3A6NEY3 463 aa17.71■□□□□ 0.43
IGHV3-47-201ENST00000425060 GPR89AB7ZAQ6 455 aa17.71■□□□□ 0.43
IGHV3-47-201ENST00000425060 BUD23O43709 281 aaKnown RBP17.71■□□□□ 0.43
IGHV3-47-201ENST00000425060 LIASO43766 372 aa17.71■□□□□ 0.43
IGHV3-47-201ENST00000425060 PPFIA2O75334 1257 aa17.71■□□□□ 0.43
IGHV3-47-201ENST00000425060 GPR89BP0CG08 455 aa17.71■□□□□ 0.43
IGHV3-47-201ENST00000425060 CA5AP35218 305 aa17.71■□□□□ 0.43
IGHV3-47-201ENST00000425060 MAZP56270 477 aaKnown RBP17.71■□□□□ 0.43
IGHV3-47-201ENST00000425060 B4GALNT1Q00973 533 aa17.71■□□□□ 0.43
IGHV3-47-201ENST00000425060 PEX6Q13608 980 aa17.71■□□□□ 0.43
IGHV3-47-201ENST00000425060 NR1D2Q14995 579 aa17.71■□□□□ 0.43
IGHV3-47-201ENST00000425060 SIX1Q15475 284 aaPredicted RBP17.71■□□□□ 0.43
IGHV3-47-201ENST00000425060 KHDC1Q4VXA5 237 aaKnown RBP17.71■□□□□ 0.43
IGHV3-47-201ENST00000425060 RBM44Q6ZP01 1051 aaKnown RBP17.71■□□□□ 0.43
IGHV3-47-201ENST00000425060 PATE1Q8WXA2 126 aa17.71■□□□□ 0.43
IGHV3-47-201ENST00000425060 GRAMD1AQ96CP6 724 aa17.71■□□□□ 0.43
IGHV3-47-201ENST00000425060 ALS2CR12Q96Q35 445 aa17.71■□□□□ 0.43
IGHV3-47-201ENST00000425060 FRMD8P1Q9BZ68 369 aaPredicted RBP17.71■□□□□ 0.43
IGHV3-47-201ENST00000425060 OR2AG1Q9H205 316 aa17.71■□□□□ 0.43
IGHV3-47-201ENST00000425060 LRRN3Q9H3W5 708 aa17.71■□□□□ 0.43
IGHV3-47-201ENST00000425060 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.71■□□□□ 0.43
IGHV3-47-201ENST00000425060 ENTPD2Q9Y5L3 495 aa17.71■□□□□ 0.43
IGHV3-47-201ENST00000425060 ZZEF1O43149 2961 aa17.71■□□□□ 0.43
IGHV3-47-201ENST00000425060 ZFC3H1O60293 1989 aaKnown RBP17.7■□□□□ 0.42
IGHV3-47-201ENST00000425060 A0A1W2PNU3 283 aaPredicted RBP17.7■□□□□ 0.42
IGHV3-47-201ENST00000425060 GRID2O43424 1007 aa17.7■□□□□ 0.42
IGHV3-47-201ENST00000425060 B4GAT1O43505 415 aa17.7■□□□□ 0.42
IGHV3-47-201ENST00000425060 EML2O95834 649 aa17.7■□□□□ 0.42
IGHV3-47-201ENST00000425060 STIP1P31948 543 aaKnown RBP17.7■□□□□ 0.42
IGHV3-47-201ENST00000425060 SPAM1P38567 509 aa17.7■□□□□ 0.42
IGHV3-47-201ENST00000425060 CLCNKAP51800 687 aa17.7■□□□□ 0.42
IGHV3-47-201ENST00000425060 SPARCL1Q14515 664 aa17.7■□□□□ 0.42
IGHV3-47-201ENST00000425060 PTPRCAPQ14761 206 aa17.7■□□□□ 0.42
IGHV3-47-201ENST00000425060 TAF1AQ15573 450 aaPredicted RBP17.7■□□□□ 0.42
IGHV3-47-201ENST00000425060 ARHGEF18Q6ZSZ5 1173 aa17.7■□□□□ 0.42
IGHV3-47-201ENST00000425060 CHST15Q7LFX5 561 aaPredicted RBP17.7■□□□□ 0.42
IGHV3-47-201ENST00000425060 SPRED1Q7Z699 444 aa17.7■□□□□ 0.42
IGHV3-47-201ENST00000425060 PHYKPLQ8IUZ5 450 aa17.7■□□□□ 0.42
IGHV3-47-201ENST00000425060 TRIM58Q8NG06 486 aa17.7■□□□□ 0.42
IGHV3-47-201ENST00000425060 BRSK1Q8TDC3 778 aa17.7■□□□□ 0.42
IGHV3-47-201ENST00000425060 TBL1YQ9BQ87 522 aa17.7■□□□□ 0.42
IGHV3-47-201ENST00000425060 KCTD3Q9Y597 815 aa17.7■□□□□ 0.42
IGHV3-47-201ENST00000425060 ARL5AQ9Y689 179 aa17.7■□□□□ 0.42
IGHV3-47-201ENST00000425060 ACACAQ13085 2346 aa17.7■□□□□ 0.42
IGHV3-47-201ENST00000425060 A6NCN8 305 aa17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 PRR19A6NJB7 356 aa17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 PPM1DO15297 605 aa17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 STX7O15400 261 aaKnown RBP17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 NRDCO43847 1150 aa17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 VEGFDO43915 354 aa17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 UGT1A9O60656 530 aa17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 USP12O75317 370 aa17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 RPLP0P05388 317 aaKnown RBP17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 UGT1A6P19224 532 aa17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 LPOP22079 712 aaPredicted RBP17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 UGT1A1P22309 533 aa17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 UGT1A4P22310 534 aa17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 UGT1A3P35503 534 aa17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 UGT1A5P35504 534 aa17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 SPIDRQ14159 915 aa17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 CHRNA6Q15825 494 aa17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 P3H1Q32P28 736 aa17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 CCNJLQ8IV13 435 aa17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 ZNF547Q8IVP9 402 aa17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 C1orf54Q8WWF1 131 aa17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 ATXN7L3BQ96GX2 97 aa17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 C19orf43Q9BQ61 176 aa17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 UGT1A7Q9HAW7 530 aa17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 UGT1A10Q9HAW8 530 aa17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 UGT1A8Q9HAW9 530 aa17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 TBC1D29Q9UFV1 150 aa17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 FEZ2Q9UHY8 353 aaPredicted RBP17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 PKP3Q9Y446 797 aa17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 AK5Q9Y6K8 562 aa17.69■□□□□ 0.42
IGHV3-47-201ENST00000425060 UNC13CQ8NB66 2214 aa17.68■□□□□ 0.42
IGHV3-47-201ENST00000425060 GLYATL1P3A0A0U1RQE8 302 aa17.68■□□□□ 0.42
IGHV3-47-201ENST00000425060 D6RAR5 112 aa17.68■□□□□ 0.42
IGHV3-47-201ENST00000425060 MTX2O75431 263 aa17.68■□□□□ 0.42
IGHV3-47-201ENST00000425060 KRT37O76014 449 aa17.68■□□□□ 0.42
IGHV3-47-201ENST00000425060 ACP5P13686 325 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms