RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 IVLP07476 585 aa25.17■■□□□ 1.62
TSPAN3-203ENST00000424443 CRADDP78560 199 aa25.17■■□□□ 1.62
TSPAN3-203ENST00000424443 XIAPP98170 497 aa25.17■■□□□ 1.62
TSPAN3-203ENST00000424443 C1orf61Q13536 156 aa25.17■■□□□ 1.62
TSPAN3-203ENST00000424443 ZRANB3Q5FWF4 1079 aa25.17■■□□□ 1.62
TSPAN3-203ENST00000424443 LDLRAP1Q5SW96 308 aa25.17■■□□□ 1.62
TSPAN3-203ENST00000424443 DBX2Q6ZNG2 339 aa25.17■■□□□ 1.62
TSPAN3-203ENST00000424443 PTCD2Q8WV60 388 aaKnown RBP25.17■■□□□ 1.62
TSPAN3-203ENST00000424443 SERPINB12Q96P63 405 aa25.17■■□□□ 1.62
TSPAN3-203ENST00000424443 LRRC61Q9BV99 259 aa25.17■■□□□ 1.62
TSPAN3-203ENST00000424443 ZCCHC2Q9C0B9 1178 aaKnown RBP25.17■■□□□ 1.62
TSPAN3-203ENST00000424443 CHRAC1Q9NRG0 131 aa25.17■■□□□ 1.62
TSPAN3-203ENST00000424443 RIMKLBQ9ULI2 386 aa25.17■■□□□ 1.62
TSPAN3-203ENST00000424443 CSNK1G3Q9Y6M4 447 aa25.17■■□□□ 1.62
TSPAN3-203ENST00000424443 SMAPO00193 183 aa25.16■■□□□ 1.62
TSPAN3-203ENST00000424443 GAPDHSO14556 408 aaPredicted RBP25.16■■□□□ 1.62
TSPAN3-203ENST00000424443 RAD51CO43502 376 aa25.16■■□□□ 1.62
TSPAN3-203ENST00000424443 AVILO75366 819 aa25.16■■□□□ 1.62
TSPAN3-203ENST00000424443 MRPS25P82663 173 aaKnown RBP25.16■■□□□ 1.62
TSPAN3-203ENST00000424443 NFATC2Q13469 925 aa25.16■■□□□ 1.62
TSPAN3-203ENST00000424443 PEX6Q13608 980 aa25.16■■□□□ 1.62
TSPAN3-203ENST00000424443 GTF2H3Q13889 308 aa25.16■■□□□ 1.62
TSPAN3-203ENST00000424443 MORF4L2Q15014 288 aa25.16■■□□□ 1.62
TSPAN3-203ENST00000424443 TCEA2Q15560 299 aa25.16■■□□□ 1.62
TSPAN3-203ENST00000424443 SNX20Q7Z614 316 aa25.16■■□□□ 1.62
TSPAN3-203ENST00000424443 CAND1Q86VP6 1230 aaKnown RBP25.16■■□□□ 1.62
TSPAN3-203ENST00000424443 GALNT13Q8IUC8 556 aa25.16■■□□□ 1.62
TSPAN3-203ENST00000424443 SLC25A45Q8N413 288 aa25.16■■□□□ 1.62
TSPAN3-203ENST00000424443 PEX13Q92968 403 aa25.16■■□□□ 1.62
TSPAN3-203ENST00000424443 ULK4Q96C45 1275 aa25.16■■□□□ 1.62
TSPAN3-203ENST00000424443 OR2AG1Q9H205 316 aa25.16■■□□□ 1.62
TSPAN3-203ENST00000424443 CAAP1Q9H8G2 361 aa25.16■■□□□ 1.62
TSPAN3-203ENST00000424443 RMI1Q9H9A7 625 aa25.16■■□□□ 1.62
TSPAN3-203ENST00000424443 SYBUQ9NX95 663 aa25.16■■□□□ 1.62
TSPAN3-203ENST00000424443 ZNHIT2Q9UHR6 403 aa25.16■■□□□ 1.62
TSPAN3-203ENST00000424443 UTP11Q9Y3A2 253 aaKnown RBP25.16■■□□□ 1.62
TSPAN3-203ENST00000424443 GPSM3Q9Y4H4 160 aa25.16■■□□□ 1.62
TSPAN3-203ENST00000424443 CFAP54Q96N23 3096 aa25.15■■□□□ 1.62
TSPAN3-203ENST00000424443 FFAR2O15552 330 aa25.15■■□□□ 1.62
TSPAN3-203ENST00000424443 VEGFDO43915 354 aa25.15■■□□□ 1.62
TSPAN3-203ENST00000424443 PRAMEP78395 509 aa25.15■■□□□ 1.62
TSPAN3-203ENST00000424443 KCTD16Q68DU8 428 aa25.15■■□□□ 1.62
TSPAN3-203ENST00000424443 GKN2Q86XP6 184 aa25.15■■□□□ 1.62
TSPAN3-203ENST00000424443 EID2Q8N6I1 236 aa25.15■■□□□ 1.62
TSPAN3-203ENST00000424443 BBOF1Q8ND07 529 aa25.15■■□□□ 1.62
TSPAN3-203ENST00000424443 SCG3Q8WXD2 468 aaKnown RBP25.15■■□□□ 1.62
TSPAN3-203ENST00000424443 ERP44Q9BS26 406 aa25.15■■□□□ 1.62
TSPAN3-203ENST00000424443 DUSP23Q9BVJ7 150 aa25.15■■□□□ 1.62
TSPAN3-203ENST00000424443 RAB17Q9H0T7 212 aa25.15■■□□□ 1.62
TSPAN3-203ENST00000424443 SMOXQ9NWM0 555 aa25.15■■□□□ 1.62
TSPAN3-203ENST00000424443 ATXN10Q9UBB4 475 aa25.15■■□□□ 1.62
TSPAN3-203ENST00000424443 ZNF106Q9H2Y7 1883 aaKnown RBP25.15■■□□□ 1.62
TSPAN3-203ENST00000424443 DNAH14Q0VDD8 3507 aa25.14■■□□□ 1.62
TSPAN3-203ENST00000424443 CTAGE15A4D2H0 777 aa25.14■■□□□ 1.62
TSPAN3-203ENST00000424443 SDR42E2A6NKP2 422 aa25.14■■□□□ 1.62
TSPAN3-203ENST00000424443 GPR89AB7ZAQ6 455 aa25.14■■□□□ 1.62
TSPAN3-203ENST00000424443 GPR39O43194 453 aa25.14■■□□□ 1.62
TSPAN3-203ENST00000424443 MTX2O75431 263 aa25.14■■□□□ 1.62
TSPAN3-203ENST00000424443 CDK14O94921 469 aa25.14■■□□□ 1.62
TSPAN3-203ENST00000424443 ANXA6P08133 673 aa25.14■■□□□ 1.62
TSPAN3-203ENST00000424443 GPR89BP0CG08 455 aa25.14■■□□□ 1.62
TSPAN3-203ENST00000424443 CTAGE8P0CG41 777 aa25.14■■□□□ 1.62
TSPAN3-203ENST00000424443 IVDP26440 423 aa25.14■■□□□ 1.62
TSPAN3-203ENST00000424443 AKT1P31749 480 aa25.14■■□□□ 1.62
TSPAN3-203ENST00000424443 PUM1Q14671 1186 aaKnown RBP eCLIP25.14■■□□□ 1.62
TSPAN3-203ENST00000424443 GPR33Q49SQ1 333 aa25.14■■□□□ 1.62
TSPAN3-203ENST00000424443 ZNF648Q5T619 568 aaPredicted RBP25.14■■□□□ 1.62
TSPAN3-203ENST00000424443 KANSL1Q7Z3B3 1105 aa25.14■■□□□ 1.62
TSPAN3-203ENST00000424443 CTAGE6Q86UF2 777 aa25.14■■□□□ 1.62
TSPAN3-203ENST00000424443 CTAGE4Q8IX94 777 aa25.14■■□□□ 1.62
TSPAN3-203ENST00000424443 SDR16C5Q8N3Y7 309 aa25.14■■□□□ 1.62
TSPAN3-203ENST00000424443 OR6P1Q8NGX9 317 aa25.14■■□□□ 1.62
TSPAN3-203ENST00000424443 HDAC10Q969S8 669 aa25.14■■□□□ 1.62
TSPAN3-203ENST00000424443 TBRG4Q969Z0 631 aaKnown RBP eCLIP25.14■■□□□ 1.62
TSPAN3-203ENST00000424443 TMEM168Q9H0V1 697 aa25.14■■□□□ 1.62
TSPAN3-203ENST00000424443 MRM3Q9HC36 420 aaKnown RBP25.14■■□□□ 1.62
TSPAN3-203ENST00000424443 ANAPC5Q9UJX4 755 aa25.14■■□□□ 1.62
TSPAN3-203ENST00000424443 BTBD3Q9Y2F9 522 aa25.14■■□□□ 1.62
TSPAN3-203ENST00000424443 CEP250Q9BV73 2442 aa25.14■■□□□ 1.61
TSPAN3-203ENST00000424443 MAGEB16A2A368 324 aa25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 TM4SF5O14894 197 aa25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 SEC31AO94979 1220 aaKnown RBP25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 MSH3P20585 1137 aa25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 ITGA8P53708 1063 aa25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 CACNG1Q06432 222 aa25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 TMEM115Q12893 351 aaPredicted RBP25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 ILF3Q12906 894 aaKnown RBP eCLIP25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 GPRC6AQ5T6X5 926 aa25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 ARMC3Q5W041 872 aa25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 C8orf74Q6P047 294 aa25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 TAS2R42Q7RTR8 314 aa25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 TAF8Q7Z7C8 310 aa25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 ADGRG6Q86SQ4 1221 aa25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 PIP4P1Q86T03 277 aa25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 DDHD1Q8NEL9 900 aa25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 DEFB124Q8NES8 71 aa25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 OR13J1Q8NGT2 312 aa25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 SCARF2Q96GP6 870 aaPredicted RBP25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 ZNF778Q96MU6 729 aa25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 CAMK1GQ96NX5 476 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms