RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 INPP5JQ15735 1006 aaPredicted RBP16.53■□□□□ 0.24
CHCHD3-202ENST00000423635 EIF2S3LQ2VIR3 472 aaKnown RBP16.53■□□□□ 0.24
CHCHD3-202ENST00000423635 PPP6R3Q5H9R7 873 aaPredicted RBP16.53■□□□□ 0.24
CHCHD3-202ENST00000423635 ACAD10Q6JQN1 1059 aa16.53■□□□□ 0.24
CHCHD3-202ENST00000423635 CYP4V2Q6ZWL3 525 aaPredicted RBP16.53■□□□□ 0.24
CHCHD3-202ENST00000423635 RNF31Q96EP0 1072 aa16.53■□□□□ 0.24
CHCHD3-202ENST00000423635 PLEKHG4BQ96PX9 1271 aa16.53■□□□□ 0.24
CHCHD3-202ENST00000423635 AGPAT1Q99943 283 aa16.53■□□□□ 0.24
CHCHD3-202ENST00000423635 SLC25A23Q9BV35 468 aa16.53■□□□□ 0.24
CHCHD3-202ENST00000423635 FAM207AQ9NSI2 230 aaPredicted RBP16.53■□□□□ 0.24
CHCHD3-202ENST00000423635 PCSK1NQ9UHG2 260 aa16.53■□□□□ 0.24
CHCHD3-202ENST00000423635 PRRC2CQ9Y520 2896 aaKnown RBP16.53■□□□□ 0.24
CHCHD3-202ENST00000423635 TNRC6AQ8NDV7 1962 aaKnown RBP16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 HIVEP3Q5T1R4 2406 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 A0A0J9YYE9 177 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 TCP11X1B4DZS4 312 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 SNX2O60749 519 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 UBXN7O94888 489 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 CLDN1O95832 211 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 TRBC1P01850 177 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 ACP5P13686 325 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 PSMA2P25787 234 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 COL8A1P27658 744 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 SEPHS1P49903 392 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 PGDP52209 483 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 MAMLD1Q13495 774 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 SYCP1Q15431 976 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 UGT8Q16880 541 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 MARC1Q5VT66 337 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 TMEM26Q6ZUK4 368 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 CT55Q8WUE5 264 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 KLHL6Q8WZ60 621 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 SMIM14Q96QK8 99 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 WDR24Q96S15 920 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 GPR87Q9BY21 358 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 BRD8Q9H0E9 1235 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 CASS4Q9NQ75 786 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 TAB2Q9NYJ8 693 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 RCOR3Q9P2K3 495 aaPredicted RBP16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 LNPEPQ9UIQ6 1025 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 PCDHGB7Q9Y5F8 929 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 SLC30A1Q9Y6M5 507 aa16.52■□□□□ 0.24
CHCHD3-202ENST00000423635 DOPEY1Q5JWR5 2465 aa16.52■□□□□ 0.23
CHCHD3-202ENST00000423635 NUAK1O60285 661 aa16.51■□□□□ 0.23
CHCHD3-202ENST00000423635 CASP14P31944 242 aa16.51■□□□□ 0.23
CHCHD3-202ENST00000423635 DPCR1Q3MIW9 517 aa16.51■□□□□ 0.23
CHCHD3-202ENST00000423635 PRSS42Q7Z5A4 293 aa16.51■□□□□ 0.23
CHCHD3-202ENST00000423635 PPP1R3BQ86XI6 285 aa16.51■□□□□ 0.23
CHCHD3-202ENST00000423635 AOPEPQ8N6M6 819 aa16.51■□□□□ 0.23
CHCHD3-202ENST00000423635 ELMO2Q96JJ3 720 aa16.51■□□□□ 0.23
CHCHD3-202ENST00000423635 TGM7Q96PF1 710 aa16.51■□□□□ 0.23
CHCHD3-202ENST00000423635 FCRL4Q96PJ5 515 aa16.51■□□□□ 0.23
CHCHD3-202ENST00000423635 CARD9Q9H257 536 aa16.51■□□□□ 0.23
CHCHD3-202ENST00000423635 ACTL8Q9H568 366 aa16.51■□□□□ 0.23
CHCHD3-202ENST00000423635 ZWILCHQ9H900 591 aa16.51■□□□□ 0.23
CHCHD3-202ENST00000423635 SEPT11Q9NVA2 429 aaKnown RBP16.51■□□□□ 0.23
CHCHD3-202ENST00000423635 PARVAQ9NVD7 372 aa16.51■□□□□ 0.23
CHCHD3-202ENST00000423635 DNPEPQ9ULA0 475 aa16.51■□□□□ 0.23
CHCHD3-202ENST00000423635 SIK3Q9Y2K2 1263 aa16.51■□□□□ 0.23
CHCHD3-202ENST00000423635 GRID2O43424 1007 aa16.5■□□□□ 0.23
CHCHD3-202ENST00000423635 PRPSAP2O60256 369 aa16.5■□□□□ 0.23
CHCHD3-202ENST00000423635 TYRP1P17643 537 aa16.5■□□□□ 0.23
CHCHD3-202ENST00000423635 AMD1P17707 334 aa16.5■□□□□ 0.23
CHCHD3-202ENST00000423635 VARSP26640 1264 aaKnown RBP16.5■□□□□ 0.23
CHCHD3-202ENST00000423635 MIPP30301 263 aa16.5■□□□□ 0.23
CHCHD3-202ENST00000423635 SLC19A1P41440 591 aa16.5■□□□□ 0.23
CHCHD3-202ENST00000423635 MMP13P45452 471 aa16.5■□□□□ 0.23
CHCHD3-202ENST00000423635 LEPRP48357 1165 aaKnown RBP16.5■□□□□ 0.23
CHCHD3-202ENST00000423635 CDH6P55285 790 aa16.5■□□□□ 0.23
CHCHD3-202ENST00000423635 PLEKHA7Q6IQ23 1121 aa16.5■□□□□ 0.23
CHCHD3-202ENST00000423635 CYB5D1Q6P9G0 228 aa16.5■□□□□ 0.23
CHCHD3-202ENST00000423635 TEX26Q8N6G2 289 aa16.5■□□□□ 0.23
CHCHD3-202ENST00000423635 NSMCE1Q8WV22 266 aa16.5■□□□□ 0.23
CHCHD3-202ENST00000423635 SCHIP1Q9P0W5 487 aaPredicted RBP16.5■□□□□ 0.23
CHCHD3-202ENST00000423635 ADGRG1Q9Y653 693 aa16.5■□□□□ 0.23
CHCHD3-202ENST00000423635 TMEM191CA6NGB0 347 aa16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 KIF1CO43896 1103 aaKnown RBP16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 CEACAM4O75871 244 aa16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 RNF8O76064 485 aa16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 TIAF1O95411 115 aa16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 CLDN7O95471 211 aa16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 PTPN4P29074 926 aa16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 CCL11P51671 97 aa16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 MRPL49Q13405 166 aaKnown RBP16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 LAMB3Q13751 1172 aa16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 CT47A1Q5JQC4 288 aaPredicted RBP16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 HENMT1Q5T8I9 393 aaKnown RBP16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 JMJD6Q6NYC1 403 aaPredicted RBP16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 SYVN1Q86TM6 617 aa16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 PHYKPLQ8IUZ5 450 aa16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 Q8NA96 180 aa16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 PRR7Q8TB68 274 aa16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 LYSMD1Q96S90 227 aa16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 RAB33BQ9H082 229 aa16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 ING2Q9H160 280 aa16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 AKIRIN1Q9H9L7 192 aaPredicted RBP16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 ACSS2Q9NR19 701 aa16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 ETNK2Q9NVF9 386 aa16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 SEMA5BQ9P283 1151 aa16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 ZNF624Q9P2J8 865 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms