RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 SHBQ15464 509 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 ZNF423Q2M1K9 1284 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 ALG11Q2TAA5 492 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 MSS51Q4VC12 460 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 KCTD16Q68DU8 428 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 CASC4Q6P4E1 433 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 CES3Q6UWW8 571 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 MACC1Q6ZN28 852 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 NLRP9Q7RTR0 991 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 RD3Q7Z3Z2 195 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 PARGQ86W56 976 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 AGGF1Q8N302 714 aaeCLIP9.2□□□□□ -0.94
PDGFC-202ENST00000422544 BBOF1Q8ND07 529 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 OR56A4Q8NGH8 313 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 OR13J1Q8NGT2 312 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 DTX3LQ8TDB6 740 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 BTN2A2Q8WVV5 523 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 OR1E3Q8WZA6 343 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 GLYATL1Q969I3 302 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 HDAC10Q969S8 669 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 COX14Q96I36 57 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 TBATAQ96M53 351 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 WDR92Q96MX6 357 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 KIFC1Q9BW19 673 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 RAB17Q9H0T7 212 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 TCEAL2Q9H3H9 227 aaPredicted RBP9.2□□□□□ -0.94
PDGFC-202ENST00000422544 FAM96AQ9H5X1 160 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 ASB8Q9H765 288 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 L2HGDHQ9H9P8 463 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 FGF22Q9HCT0 170 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 MRPL40Q9NQ50 206 aaKnown RBP9.2□□□□□ -0.94
PDGFC-202ENST00000422544 DNAJC28Q9NX36 388 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 WHRNQ9P202 907 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 KLQ9UEF7 1012 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 MOSPD1Q9UJG1 213 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 APPL1Q9UKG1 709 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 MAD1L1Q9Y6D9 718 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 OAS3Q9Y6K5 1087 aaKnown RBP9.2□□□□□ -0.94
PDGFC-202ENST00000422544 PI4KAP42356 2102 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 CACNA1EQ15878 2313 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 A0A1B0GTQ1 180 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.19□□□□□ -0.94
PDGFC-202ENST00000422544 ESYT3A0FGR9 886 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 MAGEB16A2A368 324 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 CCDC162PA2VCL2 907 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 OR51F1A6NGY5 319 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 SMAPO00193 183 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 DFNA5O60443 496 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 SDC3O75056 442 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 MTX2O75431 263 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 BANF1O75531 89 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 PRAMEF1O95521 474 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 FUCA1P04066 466 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 CSF2P04141 144 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 CEACAM5P06731 702 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 PRSS56P0CW18 603 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 JUNDP17535 347 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 KELP23276 732 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 NMBRP28336 390 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 MAGEA3P43357 314 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 RXRGP48443 463 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 ARRB1P49407 418 aaPredicted RBP9.19□□□□□ -0.94
PDGFC-202ENST00000422544 CDKN1CP49918 316 aaPredicted RBP9.19□□□□□ -0.94
PDGFC-202ENST00000422544 PLTPP55058 493 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 SRP54P61011 504 aaKnown RBP9.19□□□□□ -0.94
PDGFC-202ENST00000422544 GUCY2DQ02846 1103 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 PPARDQ03181 441 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 DHX9Q08211 1270 aaKnown RBP9.19□□□□□ -0.94
PDGFC-202ENST00000422544 BNIP3Q12983 259 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 CALCOCO2Q13137 446 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 NFATC2Q13469 925 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 COL9A2Q14055 689 aaPredicted RBP9.19□□□□□ -0.94
PDGFC-202ENST00000422544 UAP1L1Q3KQV9 507 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 BBS9Q3SYG4 887 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 KHDC1Q4VXA5 237 aaKnown RBP9.19□□□□□ -0.94
PDGFC-202ENST00000422544 DNAJC21Q5F1R6 531 aaKnown RBP9.19□□□□□ -0.94
PDGFC-202ENST00000422544 ZRANB3Q5FWF4 1079 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 HP1BP3Q5SSJ5 553 aaPredicted RBP9.19□□□□□ -0.94
PDGFC-202ENST00000422544 PDPK2PQ6A1A2 396 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 MARK2Q7KZI7 788 aaKnown RBP9.19□□□□□ -0.94
PDGFC-202ENST00000422544 HID1Q8IV36 788 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 PHACTR4Q8IZ21 702 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 RBFAQ8N0V3 343 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 PDIK1LQ8N165 341 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 LRRN4CLQ8ND94 238 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 OR6P1Q8NGX9 317 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 GDAP1Q8TB36 358 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 PTCD2Q8WV60 388 aaKnown RBP9.19□□□□□ -0.94
PDGFC-202ENST00000422544 MFSD3Q96ES6 412 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 PDXPQ96GD0 296 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 SIGLEC10Q96LC7 697 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 FCRL3Q96P31 734 aaPredicted RBP9.19□□□□□ -0.94
PDGFC-202ENST00000422544 C19orf43Q9BQ61 176 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 TRIM56Q9BRZ2 755 aaKnown RBP9.19□□□□□ -0.94
PDGFC-202ENST00000422544 FRMD8Q9BZ67 464 aaPredicted RBP9.19□□□□□ -0.94
PDGFC-202ENST00000422544 MRM3Q9HC36 420 aaKnown RBP9.19□□□□□ -0.94
PDGFC-202ENST00000422544 EPB41L5Q9HCM4 733 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 TRIM39Q9HCM9 518 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 CYP4F12Q9HCS2 524 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 TMEM9BQ9NQ34 198 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms