RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 ALDH4A1P30038 563 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 HMGCLP35914 325 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 CHRNA4P43681 627 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 PDX1P52945 283 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 PCBP4P57723 403 aaKnown RBP15.17■□□□□ 0.02
NUP50-204ENST00000417702 EIF3IQ13347 325 aaKnown RBP15.17■□□□□ 0.02
NUP50-204ENST00000417702 PRPSAP1Q14558 356 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 SLC1A5Q15758 541 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 AMZ1Q400G9 498 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 AADACL2Q6P093 401 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 IGF2-ASQ6U949 168 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 CHST15Q7LFX5 561 aaPredicted RBP15.17■□□□□ 0.02
NUP50-204ENST00000417702 ZNF438Q7Z4V0 828 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 B3GNT8Q7Z7M8 397 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 PHYKPLQ8IUZ5 450 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 TTC13Q8NBP0 860 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 BLOC1S5Q8TDH9 187 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 GLYATL1Q969I3 302 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 LIN37Q96GY3 246 aaPredicted RBP15.17■□□□□ 0.02
NUP50-204ENST00000417702 PLEKHG4BQ96PX9 1271 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 FOXP3Q9BZS1 431 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 TSGA10Q9BZW7 698 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 OR2AG1Q9H205 316 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 BPIFA1Q9NP55 256 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 ATXN10Q9UBB4 475 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 ATXN7L1Q9ULK2 861 aaPredicted RBP15.17■□□□□ 0.02
NUP50-204ENST00000417702 PRKAB1Q9Y478 270 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 KIF26BQ2KJY2 2108 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 ZZEF1O43149 2961 aa15.16■□□□□ 0.02
NUP50-204ENST00000417702 GRID2O43424 1007 aa15.16■□□□□ 0.02
NUP50-204ENST00000417702 ACP5P13686 325 aa15.16■□□□□ 0.02
NUP50-204ENST00000417702 ZNF8P17098 575 aaPredicted RBP15.16■□□□□ 0.02
NUP50-204ENST00000417702 CCKBRP32239 447 aa15.16■□□□□ 0.02
NUP50-204ENST00000417702 MLLT3P42568 568 aaPredicted RBP15.16■□□□□ 0.02
NUP50-204ENST00000417702 GPR3P46089 330 aa15.16■□□□□ 0.02
NUP50-204ENST00000417702 OR1D5P58170 312 aa15.16■□□□□ 0.02
NUP50-204ENST00000417702 B4GALNT1Q00973 533 aa15.16■□□□□ 0.02
NUP50-204ENST00000417702 CLPPQ16740 277 aaPredicted RBP15.16■□□□□ 0.02
NUP50-204ENST00000417702 MAP9Q49MG5 647 aa15.16■□□□□ 0.02
NUP50-204ENST00000417702 ANKRD20A2Q5SQ80 823 aa15.16■□□□□ 0.02
NUP50-204ENST00000417702 ANKRD20A1Q5TYW2 823 aa15.16■□□□□ 0.02
NUP50-204ENST00000417702 ANKRD20A3Q5VUR7 823 aa15.16■□□□□ 0.02
NUP50-204ENST00000417702 GLT6D1Q7Z4J2 308 aa15.16■□□□□ 0.02
NUP50-204ENST00000417702 FBXO39Q8N4B4 442 aa15.16■□□□□ 0.02
NUP50-204ENST00000417702 RNF10Q8N5U6 811 aaKnown RBP15.16■□□□□ 0.02
NUP50-204ENST00000417702 ZNF248Q8NDW4 579 aa15.16■□□□□ 0.02
NUP50-204ENST00000417702 CCDC112Q8NEF3 446 aa15.16■□□□□ 0.02
NUP50-204ENST00000417702 PATE1Q8WXA2 126 aa15.16■□□□□ 0.02
NUP50-204ENST00000417702 ANP32BQ92688 251 aaKnown RBP15.16■□□□□ 0.02
NUP50-204ENST00000417702 SLC46A1Q96NT5 459 aa15.16■□□□□ 0.02
NUP50-204ENST00000417702 PPP1R2P1Q96PQ5 205 aa15.16■□□□□ 0.02
NUP50-204ENST00000417702 FAM118BQ9BPY3 351 aa15.16■□□□□ 0.02
NUP50-204ENST00000417702 ARFGAP3Q9NP61 516 aa15.16■□□□□ 0.02
NUP50-204ENST00000417702 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.16■□□□□ 0.02
NUP50-204ENST00000417702 PACSIN2Q9UNF0 486 aaPredicted RBP15.16■□□□□ 0.02
NUP50-204ENST00000417702 KCNK6Q9Y257 313 aa15.16■□□□□ 0.02
NUP50-204ENST00000417702 AAR2Q9Y312 384 aaKnown RBP15.16■□□□□ 0.02
NUP50-204ENST00000417702 PKP3Q9Y446 797 aa15.16■□□□□ 0.02
NUP50-204ENST00000417702 A0A0U1RQJ8 604 aa15.15■□□□□ 0.02
NUP50-204ENST00000417702 A0A1W2PNU3 283 aaPredicted RBP15.15■□□□□ 0.02
NUP50-204ENST00000417702 PLD2O14939 933 aa15.15■□□□□ 0.02
NUP50-204ENST00000417702 B4GAT1O43505 415 aa15.15■□□□□ 0.02
NUP50-204ENST00000417702 TNFSF15O95150 251 aa15.15■□□□□ 0.02
NUP50-204ENST00000417702 CPNE6O95741 557 aa15.15■□□□□ 0.02
NUP50-204ENST00000417702 SLC2A4P14672 509 aa15.15■□□□□ 0.02
NUP50-204ENST00000417702 CCDC173Q0VFZ6 552 aa15.15■□□□□ 0.02
NUP50-204ENST00000417702 NR1D2Q14995 579 aa15.15■□□□□ 0.02
NUP50-204ENST00000417702 ZNF648Q5T619 568 aaPredicted RBP15.15■□□□□ 0.02
NUP50-204ENST00000417702 RAB11FIP2Q7L804 512 aa15.15■□□□□ 0.02
NUP50-204ENST00000417702 ADGRG6Q86SQ4 1221 aa15.15■□□□□ 0.02
NUP50-204ENST00000417702 PIM3Q86V86 326 aa15.15■□□□□ 0.02
NUP50-204ENST00000417702 TTC30BQ8N4P2 665 aa15.15■□□□□ 0.02
NUP50-204ENST00000417702 GDAP1Q8TB36 358 aa15.15■□□□□ 0.02
NUP50-204ENST00000417702 LRRC45Q96CN5 670 aa15.15■□□□□ 0.02
NUP50-204ENST00000417702 SPATA13Q96N96 652 aa15.15■□□□□ 0.02
NUP50-204ENST00000417702 FICDQ9BVA6 458 aa15.15■□□□□ 0.02
NUP50-204ENST00000417702 STN1Q9H668 368 aaKnown RBP15.15■□□□□ 0.02
NUP50-204ENST00000417702 ASCL3Q9NQ33 180 aa15.15■□□□□ 0.02
NUP50-204ENST00000417702 PCYT1BQ9Y5K3 369 aaPredicted RBP15.15■□□□□ 0.02
NUP50-204ENST00000417702 CFAP47Q6ZTR5 3102 aa15.15■□□□□ 0.02
NUP50-204ENST00000417702 PTPRQQ9UMZ3 2332 aa15.15■□□□□ 0.02
NUP50-204ENST00000417702 CACNA1GO43497 2377 aa15.14■□□□□ 0.01
NUP50-204ENST00000417702 AHCTF1Q8WYP5 2266 aa15.14■□□□□ 0.01
NUP50-204ENST00000417702 ADAMTS20P59510 1910 aa15.14■□□□□ 0.01
NUP50-204ENST00000417702 TRBV23OR9-2A0A075B6M9 112 aa15.14■□□□□ 0.01
NUP50-204ENST00000417702 PPM1DO15297 605 aa15.14■□□□□ 0.01
NUP50-204ENST00000417702 DDX3YO15523 660 aaKnown RBP15.14■□□□□ 0.01
NUP50-204ENST00000417702 KRT86O43790 486 aa15.14■□□□□ 0.01
NUP50-204ENST00000417702 NRDCO43847 1150 aa15.14■□□□□ 0.01
NUP50-204ENST00000417702 VEGFDO43915 354 aa15.14■□□□□ 0.01
NUP50-204ENST00000417702 SNX2O60749 519 aa15.14■□□□□ 0.01
NUP50-204ENST00000417702 PPFIA2O75334 1257 aa15.14■□□□□ 0.01
NUP50-204ENST00000417702 CDK14O94921 469 aa15.14■□□□□ 0.01
NUP50-204ENST00000417702 AGTP01019 485 aa15.14■□□□□ 0.01
NUP50-204ENST00000417702 ITPKBP27987 946 aa15.14■□□□□ 0.01
NUP50-204ENST00000417702 PSMB4P28070 264 aa15.14■□□□□ 0.01
NUP50-204ENST00000417702 SPAM1P38567 509 aa15.14■□□□□ 0.01
NUP50-204ENST00000417702 PPM1FP49593 454 aaPredicted RBP15.14■□□□□ 0.01
NUP50-204ENST00000417702 ZFP36L1Q07352 338 aaKnown RBP15.14■□□□□ 0.01
NUP50-204ENST00000417702 GTF2H3Q13889 308 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms