RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 IL36AQ9UHA7 158 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 USH1CQ9Y6N9 552 aa6.6□□□□□ -1.35
HDAC8-211ENST00000415409 ATXN2Q99700 1313 aaKnown RBP6.59□□□□□ -1.35
HDAC8-211ENST00000415409 CHD9Q3L8U1 2897 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 EDDM13A0A1B0GTR0 161 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 TSPAN11A1L157 253 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 NPIPB15A6NHN6 443 aaPredicted RBP6.59□□□□□ -1.35
HDAC8-211ENST00000415409 A8MX80 341 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 UPK3BL1B0FP48 263 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 TMEM114B3SHH9 223 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 E5RI56 91 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 UPK3BL2E5RIL1 263 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 G3V2L1 256 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 H3BMM5 538 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 SNNO75324 88 aaPredicted RBP6.59□□□□□ -1.35
HDAC8-211ENST00000415409 LEFTY1O75610 366 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 DCTN3O75935 186 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 SNUPNO95149 360 aaKnown RBP6.59□□□□□ -1.35
HDAC8-211ENST00000415409 PRAMEF1O95521 474 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 ESR1P03372 595 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 PRNPP04156 253 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 FGF3P11487 239 aaPredicted RBP6.59□□□□□ -1.35
HDAC8-211ENST00000415409 LAMP2P13473 410 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 PKMP14618 531 aaKnown RBP6.59□□□□□ -1.35
HDAC8-211ENST00000415409 ZNF7P17097 686 aaPredicted RBP6.59□□□□□ -1.35
HDAC8-211ENST00000415409 PSMC3P17980 439 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 CD9P21926 228 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 ATP5F1P24539 256 aaPredicted RBP6.59□□□□□ -1.35
HDAC8-211ENST00000415409 VIPR1P32241 457 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 EIF2DP41214 584 aaKnown RBP6.59□□□□□ -1.35
HDAC8-211ENST00000415409 GRIA2P42262 883 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 SKIV2L2P42285 1042 aaKnown RBP6.59□□□□□ -1.35
HDAC8-211ENST00000415409 SLC6A11P48066 632 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 GLRBP48167 497 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 SLC1A6P48664 564 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 SUOXP51687 545 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 ARFIP2P53365 341 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 ADARP55265 1226 aaKnown RBP6.59□□□□□ -1.35
HDAC8-211ENST00000415409 XIAPP98170 497 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 OCRLQ01968 901 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 OVGP1Q12889 678 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 PEX6Q13608 980 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 ITGA9Q13797 1035 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 CSHL1Q14406 222 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 GRM2Q14416 872 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 SEMA3AQ14563 771 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 ZNF460Q14592 562 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 PTPRRQ15256 657 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 CDKN3Q16667 212 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 HNRNPA1L2Q32P51 320 aaKnown RBP6.59□□□□□ -1.35
HDAC8-211ENST00000415409 ITPRIPL2Q3MIP1 535 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 ZNF805Q5CZA5 627 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 LIPMQ5VYY2 423 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 LRRC66Q68CR7 880 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 CGB2Q6NT52 195 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 PSAPL1Q6NUJ1 521 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 UGT3A1Q6NUS8 523 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 ERAP2Q6P179 960 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 ZNF549Q6P9A3 640 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 C6orf89Q6UWU4 347 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 FAM151BQ6UXP7 276 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 MTSS1LQ765P7 747 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 Q7L0L9 218 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 TRPM8Q7Z2W7 1104 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 DSG4Q86SJ6 1040 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 SERPINA9Q86WD7 417 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 C12orf40Q86WS4 652 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 ZSWIM9Q86XI8 627 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 PIANPQ8IYJ0 282 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 CENPLQ8N0S6 344 aaPredicted RBP6.59□□□□□ -1.35
HDAC8-211ENST00000415409 RBFAQ8N0V3 343 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 FSTL5Q8N475 847 aaPredicted RBP6.59□□□□□ -1.35
HDAC8-211ENST00000415409 NKAPQ8N5F7 415 aaKnown RBP6.59□□□□□ -1.35
HDAC8-211ENST00000415409 GBP7Q8N8V2 638 aaPredicted RBP6.59□□□□□ -1.35
HDAC8-211ENST00000415409 OR8D1Q8WZ84 308 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 NXPE3Q969Y0 559 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 ULK4Q96C45 1275 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 CCDC126Q96EE4 140 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 THOC1Q96FV9 657 aaKnown RBP6.59□□□□□ -1.35
HDAC8-211ENST00000415409 PPP1R16AQ96I34 528 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 UBXN10Q96LJ8 280 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 NECTIN4Q96NY8 510 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 GPR78Q96P69 363 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 KXD1Q9BQD3 176 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 SIKE1Q9BRV8 207 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 TRMT61BQ9BVS5 477 aaKnown RBP6.59□□□□□ -1.35
HDAC8-211ENST00000415409 CLPBQ9H078 707 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 S1PR5Q9H228 398 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 FAM96AQ9H5X1 160 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 ASB8Q9H765 288 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 NPHS2Q9NP85 383 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 HPS4Q9NQG7 708 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 IGSF5Q9NSI5 407 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 OXSMQ9NWU1 459 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 PKD2L2Q9NZM6 624 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 CLEC1BQ9P126 229 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 XPR1Q9UBH6 696 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 B4GALT6Q9UBX8 382 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 SUN2Q9UH99 717 aa6.59□□□□□ -1.35
HDAC8-211ENST00000415409 CDH22Q9UJ99 828 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms