RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 PADI3Q9ULW8 664 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 VDAC3Q9Y277 283 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 PDS5AQ29RF7 1337 aaKnown RBP3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 IGHV4OR15-8A0A075B7B6 117 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 PLSCR5A0PG75 271 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 SMTNL1A8MU46 457 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 HNRNPCL2B2RXH8 293 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 TULP2O00295 520 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 AP3D1O14617 1153 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 OGG1O15527 345 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 AFPP02771 609 aaKnown RBP3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 RB1P06400 928 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 SNRNP70P08621 437 aaKnown RBP3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 ALOX12P18054 663 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 CORO1AP31146 461 aaKnown RBP3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 USP8P40818 1118 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 TMPOP42166 694 aaKnown RBP3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 GPR143P51810 404 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 GALCP54803 685 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 PDE1BQ01064 536 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 LMOD3Q0VAK6 560 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 COASYQ13057 564 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 ACVR2BQ13705 512 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 IRF3Q14653 427 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 IZUMO4Q1ZYL8 232 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 ZSCAN23Q3MJ62 389 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 KIAA0930Q6ICG6 404 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 FASTKD5Q7L8L6 764 aaKnown RBP3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 PCGF5Q86SE9 256 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 SDCCAG8Q86SQ7 713 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 TEX11Q8IYF3 940 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 RNF113BQ8IZP6 322 aaKnown RBP3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 SLC38A9Q8NBW4 561 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 OR8K5Q8NH50 307 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 OR5R1Q8NH85 324 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 DUSP19Q8WTR2 217 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 DNAAF4Q8WXU2 420 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 ZKSCAN4Q969J2 545 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 FAM120BQ96EK7 910 aaKnown RBP3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 ELMOD3Q96FG2 381 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 IL17FQ96PD4 163 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 CTAGE1Q96RT6 745 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 C1QTNF1Q9BXJ1 281 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 PLK3Q9H4B4 646 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 EPB41L5Q9HCM4 733 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 NSMCE4AQ9NXX6 385 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 FBXL17Q9UF56 701 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 FBXL2Q9UKC9 423 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 R3HDM2Q9Y2K5 976 aaKnown RBP3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 PCDHAC2Q9Y5I4 1007 aa3.74□□□□□ -1.81
HMGB1P11-201ENST00000413899 PTPRCP08575 1304 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 WRNQ14191 1432 aaPredicted RBP eCLIP3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 SAA2-SAA4A0A096LPE2 208 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 A0A0G2JPF8 293 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 DENND3A2RUS2 1198 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 EIF4E1BA6NMX2 242 aaKnown RBP3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 HNRNPCL3B7ZW38 293 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 ANKRD28O15084 1053 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 CAMTA2O94983 1202 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 HNRNPCL4P0DMR1 293 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 HLA-DOBP13765 273 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 ANXA7P20073 488 aaKnown RBP3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 PON1P27169 355 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 GAS1P54826 345 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 CLDN20P56880 219 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 NLRP5P59047 1200 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 MC1RQ01726 317 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 CREB5Q02930 508 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 RELQ04864 619 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 EEF1A2Q05639 463 aaKnown RBP3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 SLC20A2Q08357 652 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 ZBTB17Q13105 803 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 PRKG2Q13237 762 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 PDE1CQ14123 709 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 RAB41Q5JT25 222 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 NSUN5P2Q63ZY6 315 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 RUSC1-AS1Q66K80 236 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 TUBA1AQ71U36 451 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 ATG9AQ7Z3C6 839 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 SFR1Q86XK3 245 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 TMEM219Q86XT9 240 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 EPHX4Q8IUS5 362 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 MCEMP1Q8IX19 187 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 NAGSQ8N159 534 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 ZNF441Q8N8Z8 693 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 KCNH5Q8NCM2 988 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 ACVR1CQ8NER5 493 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 HM13Q8TCT9 377 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 SORCS1Q8WY21 1168 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 PIGTQ969N2 578 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 DACH2Q96NX9 599 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 TUBA1CQ9BQE3 449 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 FTOQ9C0B1 505 aaKnown RBP eCLIP3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 SMARCAD1Q9H4L7 1026 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 TRMT1Q9NXH9 659 aaKnown RBP3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 MALT1Q9UDY8 824 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 TBC1D29Q9UFV1 150 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 VPS28Q9UK41 221 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 PADI1Q9ULC6 663 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 NENFQ9UMX5 172 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms