RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 WHAMMP3Q1A5X7 153 aa13.82□□□□□ -0.2
CPNE1-206ENST00000412056 ADGRG6Q86SQ4 1221 aa13.82□□□□□ -0.2
CPNE1-206ENST00000412056 CAND1Q86VP6 1230 aaKnown RBP13.82□□□□□ -0.2
CPNE1-206ENST00000412056 PHYKPLQ8IUZ5 450 aa13.82□□□□□ -0.2
CPNE1-206ENST00000412056 EID2Q8N6I1 236 aa13.82□□□□□ -0.2
CPNE1-206ENST00000412056 MCUQ8NE86 351 aa13.82□□□□□ -0.2
CPNE1-206ENST00000412056 PPHLN1Q8NEY8 458 aaKnown RBP13.82□□□□□ -0.2
CPNE1-206ENST00000412056 OR13J1Q8NGT2 312 aa13.82□□□□□ -0.2
CPNE1-206ENST00000412056 KIF18AQ8NI77 898 aa13.82□□□□□ -0.2
CPNE1-206ENST00000412056 TBATAQ96M53 351 aa13.82□□□□□ -0.2
CPNE1-206ENST00000412056 SERPINB12Q96P63 405 aa13.82□□□□□ -0.2
CPNE1-206ENST00000412056 C19orf43Q9BQ61 176 aa13.82□□□□□ -0.2
CPNE1-206ENST00000412056 TRIM31Q9BZY9 425 aa13.82□□□□□ -0.2
CPNE1-206ENST00000412056 TMEM168Q9H0V1 697 aa13.82□□□□□ -0.2
CPNE1-206ENST00000412056 VPS18Q9P253 973 aa13.82□□□□□ -0.2
CPNE1-206ENST00000412056 ATXN10Q9UBB4 475 aa13.82□□□□□ -0.2
CPNE1-206ENST00000412056 PCOLCE2Q9UKZ9 415 aa13.82□□□□□ -0.2
CPNE1-206ENST00000412056 PCYT1BQ9Y5K3 369 aaPredicted RBP13.82□□□□□ -0.2
CPNE1-206ENST00000412056 OR51F1A6NGY5 319 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 EFCAB8A8MWE9 144 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 H7C0S8 307 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 AP3B1O00203 1094 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 TRIM38O00635 465 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 DNAJC6O75061 913 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 CBFA2T3O75081 653 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 CTSEP14091 401 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 ITGALP20701 1170 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 CSRP1P21291 193 aaKnown RBP13.81□□□□□ -0.2
CPNE1-206ENST00000412056 PSMA3P25788 255 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 MC4RP32245 332 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 SARNPP82979 210 aaKnown RBP13.81□□□□□ -0.2
CPNE1-206ENST00000412056 NFATC2Q13469 925 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 LAMB3Q13751 1172 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 DEFB133Q30KQ1 61 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 INAVAQ3KP66 663 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 PYCR3Q53H96 274 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 PCID2Q5JVF3 399 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 GPRC6AQ5T6X5 926 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 MPP5Q8N3R9 675 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 DDHD1Q8NEL9 900 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 CCL4L1Q8NHW4 92 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 GDAP1Q8TB36 358 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 BAHD1Q8TBE0 780 aaPredicted RBP13.81□□□□□ -0.2
CPNE1-206ENST00000412056 ZNF398Q8TD17 642 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 RHBDD1Q8TEB9 315 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 SCARF2Q96GP6 870 aaPredicted RBP13.81□□□□□ -0.2
CPNE1-206ENST00000412056 CDKN2AIPNLQ96HQ2 116 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 OR2M4Q96R27 311 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 IL22Q9GZX6 179 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 OR2AG1Q9H205 316 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 FAM96AQ9H5X1 160 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 ASB8Q9H765 288 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 TRIM39Q9HCM9 518 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 CHRAC1Q9NRG0 131 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 SMOXQ9NWM0 555 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 APPL1Q9UKG1 709 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 RIMKLBQ9ULI2 386 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 PRKAB1Q9Y478 270 aa13.81□□□□□ -0.2
CPNE1-206ENST00000412056 CNOT1A5YKK6 2376 aaKnown RBP13.81□□□□□ -0.2
CPNE1-206ENST00000412056 FAM187AA6NFU0 413 aa13.8□□□□□ -0.2
CPNE1-206ENST00000412056 GIPC1O14908 333 aa13.8□□□□□ -0.2
CPNE1-206ENST00000412056 PRSS56P0CW18 603 aa13.8□□□□□ -0.2
CPNE1-206ENST00000412056 MLNP12872 115 aa13.8□□□□□ -0.2
CPNE1-206ENST00000412056 ZNF8P17098 575 aaPredicted RBP13.8□□□□□ -0.2
CPNE1-206ENST00000412056 NMBRP28336 390 aa13.8□□□□□ -0.2
CPNE1-206ENST00000412056 MAGEA3P43357 314 aa13.8□□□□□ -0.2
CPNE1-206ENST00000412056 RPL21P46778 160 aaKnown RBP13.8□□□□□ -0.2
CPNE1-206ENST00000412056 ID4P47928 161 aa13.8□□□□□ -0.2
CPNE1-206ENST00000412056 CDKN1CP49918 316 aaPredicted RBP13.8□□□□□ -0.2
CPNE1-206ENST00000412056 NOVA1P51513 510 aaKnown RBP13.8□□□□□ -0.2
CPNE1-206ENST00000412056 ACVR1Q04771 509 aa13.8□□□□□ -0.2
CPNE1-206ENST00000412056 PUM1Q14671 1186 aaKnown RBP eCLIP13.8□□□□□ -0.2
CPNE1-206ENST00000412056 SKIDA1Q1XH10 827 aa13.8□□□□□ -0.2
CPNE1-206ENST00000412056 ZRANB3Q5FWF4 1079 aa13.8□□□□□ -0.2
CPNE1-206ENST00000412056 CRTC3Q6UUV7 619 aa13.8□□□□□ -0.2
CPNE1-206ENST00000412056 NLRP9Q7RTR0 991 aa13.8□□□□□ -0.2
CPNE1-206ENST00000412056 SNX20Q7Z614 316 aa13.8□□□□□ -0.2
CPNE1-206ENST00000412056 PCGF5Q86SE9 256 aa13.8□□□□□ -0.2
CPNE1-206ENST00000412056 AGGF1Q8N302 714 aaeCLIP13.8□□□□□ -0.2
CPNE1-206ENST00000412056 FSTL5Q8N475 847 aaPredicted RBP13.8□□□□□ -0.2
CPNE1-206ENST00000412056 OR4C6Q8NH72 309 aa13.8□□□□□ -0.2
CPNE1-206ENST00000412056 CCDC97Q96F63 343 aaPredicted RBP13.8□□□□□ -0.2
CPNE1-206ENST00000412056 SNF8Q96H20 258 aa13.8□□□□□ -0.2
CPNE1-206ENST00000412056 SLC32A1Q9H598 525 aa13.8□□□□□ -0.2
CPNE1-206ENST00000412056 XAB2Q9HCS7 855 aaKnown RBP13.8□□□□□ -0.2
CPNE1-206ENST00000412056 TREX1Q9NSU2 369 aa13.8□□□□□ -0.2
CPNE1-206ENST00000412056 NLGN3Q9NZ94 848 aa13.8□□□□□ -0.2
CPNE1-206ENST00000412056 CRLS1Q9UJA2 301 aa13.8□□□□□ -0.2
CPNE1-206ENST00000412056 PLEKHM1Q9Y4G2 1056 aa13.8□□□□□ -0.2
CPNE1-206ENST00000412056 GPSM3Q9Y4H4 160 aa13.8□□□□□ -0.2
CPNE1-206ENST00000412056 CSNK1G3Q9Y6M4 447 aa13.8□□□□□ -0.2
CPNE1-206ENST00000412056 SLC30A1Q9Y6M5 507 aa13.8□□□□□ -0.2
CPNE1-206ENST00000412056 FRYLO94915 3013 aa13.8□□□□□ -0.2
CPNE1-206ENST00000412056 RP1P56715 2156 aa13.79□□□□□ -0.2
CPNE1-206ENST00000412056 TRBV5-4A0A0C4DH59 114 aa13.79□□□□□ -0.2
CPNE1-206ENST00000412056 CCDC162PA2VCL2 907 aa13.79□□□□□ -0.2
CPNE1-206ENST00000412056 NEMP2A6NFY4 417 aa13.79□□□□□ -0.2
CPNE1-206ENST00000412056 AGAP14A8MT82 685 aa13.79□□□□□ -0.2
CPNE1-206ENST00000412056 LMO7DNF2Z398 122 aa13.79□□□□□ -0.2
CPNE1-206ENST00000412056 SIGLEC6O43699 453 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms