RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 NLRP4Q96MN2 994 aa4.05□□□□□ -1.76
RNU2-28P-201ENST00000410457 CDRT15Q96T59 188 aa4.05□□□□□ -1.76
RNU2-28P-201ENST00000410457 ALDH8A1Q9H2A2 487 aaPredicted RBP4.05□□□□□ -1.76
RNU2-28P-201ENST00000410457 KCNK15Q9H427 330 aa4.05□□□□□ -1.76
RNU2-28P-201ENST00000410457 ZWILCHQ9H900 591 aa4.05□□□□□ -1.76
RNU2-28P-201ENST00000410457 HACL1Q9UJ83 578 aa4.05□□□□□ -1.76
RNU2-28P-201ENST00000410457 LY6G6EA0A0G2JKS1 128 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 GOLGA6L9A6NEM1 432 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 URADA6NGE7 173 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 H0YGN5 161 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 CLGNO14967 610 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 ASAP2O43150 1006 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 SPINT2O43291 252 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 SPRY3O43610 288 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 MOSPD3O75425 235 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 SYF2O95926 243 aaKnown RBP4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 FYNP06241 537 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 IFNAR1P17181 557 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 STX2P32856 288 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 RPL3P39023 403 aaKnown RBP4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 RFX2P48378 723 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 NUDT6P53370 316 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 TERF1P54274 439 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 CSE1LP55060 971 aaKnown RBP4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 HNRNPH2P55795 449 aaKnown RBP4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 TRAF1Q13077 416 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 HNF4GQ14541 408 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 MYLK3Q32MK0 819 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 FSCBQ5H9T9 825 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 PXDC1Q5TGL8 231 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 NSUN5P2Q63ZY6 315 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 PAPD4Q6PIY7 484 aaKnown RBP4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 Q6ZTK2 550 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 INTS8Q75QN2 995 aaKnown RBP4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 CAMKMTQ7Z624 323 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 CTU1Q7Z7A3 348 aaKnown RBP4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 LDB1Q86U70 411 aaPredicted RBP4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 CCDC190Q86UF4 302 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 ADIPOR2Q86V24 386 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 CEP57Q86XR8 500 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 NRROSQ86YC3 692 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 SRRM1Q8IYB3 904 aaKnown RBP4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 TMEM199Q8N511 208 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 NANOGP1Q8N7R0 232 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 WFIKKN2Q8TEU8 576 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 SLC25A28Q96A46 364 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 GRAMD2BQ96HH9 432 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 RAB3IPQ96QF0 476 aaPredicted RBP4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 SYT17Q9BSW7 474 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 MRIQ9BWK5 157 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 SPRY4Q9C004 299 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 ANKRD2Q9GZV1 360 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 PPIL3Q9H2H8 161 aaKnown RBP4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 SEBOXQ9HB31 216 aaPredicted RBP4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 LARSQ9P2J5 1176 aaKnown RBP4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 DDX25Q9UHL0 483 aaKnown RBP4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 TUBE1Q9UJT0 475 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 TINAGQ9UJW2 476 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 ANAPC5Q9UJX4 755 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 FRMD4BQ9Y2L6 1034 aa4.04□□□□□ -1.76
RNU2-28P-201ENST00000410457 ATXN2Q99700 1313 aaKnown RBP4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 RPS10-NUDT3A0A1W2PQS6 291 aa4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 BECN2A8MW95 431 aa4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 B4DGG1 531 aa4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 H0YIN7 160 aa4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 KCNN4O15554 427 aa4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 RGS14O43566 566 aa4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 NDUFS7O75251 213 aa4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 RECQL5O94762 991 aaPredicted RBP4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 C22orf31O95567 290 aa4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 HSP90AB1P08238 724 aaKnown RBP4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 TMEM191BP0C7N4 346 aa4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 GJA1P17302 382 aa4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 UGT1A1P22309 533 aa4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 BDKRB2P30411 391 aa4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 CTNNA1P35221 906 aaKnown RBP4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 APOBEC1P41238 236 aaKnown RBP4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 MATR3P43243 847 aaKnown RBP eCLIP4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 RFX5P48382 616 aaPredicted RBP4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 MXI1P50539 228 aa4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 INHBEP58166 350 aa4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 SEC61BP60468 96 aaKnown RBP4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 RBP5P82980 135 aa4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 ROR2Q01974 943 aaKnown RBP4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 KRT33BQ14525 404 aa4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 TWIST1Q15672 202 aa4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 SNAPC1Q16533 368 aa4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 SYT16Q17RD7 645 aa4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 PRTGQ2VWP7 1150 aa4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 ODF3L2Q3SX64 289 aa4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 ARMC4Q5T2S8 1044 aa4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 DUS1LQ6P1R4 473 aaKnown RBP4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 SLC36A4Q6YBV0 504 aa4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 MAML2Q8IZL2 1156 aaPredicted RBP4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 PCDH20Q8N6Y1 951 aaKnown RBP4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 ZBTB8BQ8NAP8 495 aaPredicted RBP4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 SLC38A9Q8NBW4 561 aa4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 ZNF548Q8NEK5 533 aaPredicted RBP4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 Q8NFD4 153 aa4.03□□□□□ -1.76
RNU2-28P-201ENST00000410457 CFAP61Q8NHU2 1237 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms