RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 DLGAP4Q9Y2H0 992 aa3.97□□□□□ -1.77
PMS1-203ENST00000409593 R3HDM2Q9Y2K5 976 aaKnown RBP3.97□□□□□ -1.77
PMS1-203ENST00000409593 ADAM18Q9Y3Q7 739 aa3.97□□□□□ -1.77
PMS1-203ENST00000409593 CLIC4Q9Y696 253 aa3.97□□□□□ -1.77
PMS1-203ENST00000409593 ANKRD28O15084 1053 aa3.97□□□□□ -1.77
PMS1-203ENST00000409593 JRKO75564 520 aa3.97□□□□□ -1.77
PMS1-203ENST00000409593 CCNDBP1O95273 360 aa3.97□□□□□ -1.77
PMS1-203ENST00000409593 APOBEC1P41238 236 aaKnown RBP3.97□□□□□ -1.77
PMS1-203ENST00000409593 PIK3CAP42336 1068 aa3.97□□□□□ -1.77
PMS1-203ENST00000409593 PRCPP42785 496 aa3.97□□□□□ -1.77
PMS1-203ENST00000409593 MED22Q15528 200 aa3.97□□□□□ -1.77
PMS1-203ENST00000409593 PNLIPRP3Q17RR3 467 aa3.97□□□□□ -1.77
PMS1-203ENST00000409593 ZNF852Q6ZMS4 543 aa3.97□□□□□ -1.77
PMS1-203ENST00000409593 SEPT14Q6ZU15 432 aa3.97□□□□□ -1.77
PMS1-203ENST00000409593 MARK2Q7KZI7 788 aaKnown RBP3.97□□□□□ -1.77
PMS1-203ENST00000409593 SDCCAG8Q86SQ7 713 aaPredicted RBP3.97□□□□□ -1.77
PMS1-203ENST00000409593 NFE4Q86UQ8 179 aa3.97□□□□□ -1.77
PMS1-203ENST00000409593 ZBTB8BQ8NAP8 495 aaPredicted RBP3.97□□□□□ -1.77
PMS1-203ENST00000409593 OR52I2Q8NH67 350 aa3.97□□□□□ -1.77
PMS1-203ENST00000409593 UCMAQ8WVF2 138 aa3.97□□□□□ -1.77
PMS1-203ENST00000409593 ZKSCAN4Q969J2 545 aaPredicted RBP3.97□□□□□ -1.77
PMS1-203ENST00000409593 ALG14Q96F25 216 aa3.97□□□□□ -1.77
PMS1-203ENST00000409593 LINGO1Q96FE5 620 aa3.97□□□□□ -1.77
PMS1-203ENST00000409593 MAP3K20Q9NYL2 800 aaKnown RBP3.97□□□□□ -1.77
PMS1-203ENST00000409593 EIF4E1BA6NMX2 242 aaKnown RBP3.96□□□□□ -1.78
PMS1-203ENST00000409593 KCNN4O15554 427 aa3.96□□□□□ -1.78
PMS1-203ENST00000409593 NDUFS3O75489 264 aa3.96□□□□□ -1.78
PMS1-203ENST00000409593 FAM106CPP0CH98 169 aa3.96□□□□□ -1.78
PMS1-203ENST00000409593 NFKBIAP25963 317 aa3.96□□□□□ -1.78
PMS1-203ENST00000409593 NAB2Q15742 525 aa3.96□□□□□ -1.78
PMS1-203ENST00000409593 CCDC70Q6NSX1 233 aa3.96□□□□□ -1.78
PMS1-203ENST00000409593 PAPD4Q6PIY7 484 aaKnown RBP3.96□□□□□ -1.78
PMS1-203ENST00000409593 ZNF704Q6ZNC4 412 aaPredicted RBP3.96□□□□□ -1.78
PMS1-203ENST00000409593 PDILTQ8N807 584 aa3.96□□□□□ -1.78
PMS1-203ENST00000409593 TDRD7Q8NHU6 1098 aaKnown RBP3.96□□□□□ -1.78
PMS1-203ENST00000409593 LRMDAQ9H2I8 198 aa3.96□□□□□ -1.78
PMS1-203ENST00000409593 UNC45AQ9H3U1 944 aa3.96□□□□□ -1.78
PMS1-203ENST00000409593 UPF2Q9HAU5 1272 aaKnown RBP3.96□□□□□ -1.78
PMS1-203ENST00000409593 ERRFI1Q9UJM3 462 aaPredicted RBP3.96□□□□□ -1.78
PMS1-203ENST00000409593 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.95□□□□□ -1.78
PMS1-203ENST00000409593 FAM90A26D6RGX4 464 aa3.95□□□□□ -1.78
PMS1-203ENST00000409593 J3KRW8 73 aa3.95□□□□□ -1.78
PMS1-203ENST00000409593 EIF3DO15371 548 aaKnown RBP eCLIP3.95□□□□□ -1.78
PMS1-203ENST00000409593 GAS8-AS1O95177 125 aa3.95□□□□□ -1.78
PMS1-203ENST00000409593 HOXA1P49639 335 aaPredicted RBP3.95□□□□□ -1.78
PMS1-203ENST00000409593 ZBED6P86452 979 aa3.95□□□□□ -1.78
PMS1-203ENST00000409593 ZNF805Q5CZA5 627 aa3.95□□□□□ -1.78
PMS1-203ENST00000409593 PMS2CLQ68D20 193 aa3.95□□□□□ -1.78
PMS1-203ENST00000409593 GSG1LQ6UXU4 331 aa3.95□□□□□ -1.78
PMS1-203ENST00000409593 ARHGAP12Q8IWW6 846 aa3.95□□□□□ -1.78
PMS1-203ENST00000409593 PAF1Q8N7H5 531 aa3.95□□□□□ -1.78
PMS1-203ENST00000409593 HM13Q8TCT9 377 aa3.95□□□□□ -1.78
PMS1-203ENST00000409593 UTP15Q8TED0 518 aaKnown RBP3.95□□□□□ -1.78
PMS1-203ENST00000409593 TMEM255BQ8WV15 326 aa3.95□□□□□ -1.78
PMS1-203ENST00000409593 C7orf26Q96N11 449 aa3.95□□□□□ -1.78
PMS1-203ENST00000409593 SIL1Q9H173 461 aa3.95□□□□□ -1.78
PMS1-203ENST00000409593 EHD2Q9NZN4 543 aa3.95□□□□□ -1.78
PMS1-203ENST00000409593 MARCH4Q9P2E8 410 aaPredicted RBP3.95□□□□□ -1.78
PMS1-203ENST00000409593 ORC3Q9UBD5 711 aaPredicted RBP3.95□□□□□ -1.78
PMS1-203ENST00000409593 KANSL1LA0AUZ9 987 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 TMEM178BH3BS89 294 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 TMEM63AO94886 807 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 PRSS1P07477 247 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 CD53P19397 219 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 ANOS1P23352 680 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 NR2F2P24468 414 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 GALCP54803 685 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 MRPS34P82930 218 aaKnown RBP3.94□□□□□ -1.78
PMS1-203ENST00000409593 KRTCAP3Q53RY4 240 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 LRIF1Q5T3J3 769 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 TMTC3Q6ZXV5 915 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 ADSSL1Q8N142 457 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 ZNF354BQ96LW1 612 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 AASSQ9UDR5 926 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 POLG2Q9UHN1 485 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 FBXW11Q9UKB1 542 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 ZCWPW2A0A1B0GU75 182 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 OR5K3A6NET4 321 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 ERVV-2B6SEH9 535 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 FAM72CH0Y354 149 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 MBD4O95243 580 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 CD4P01730 458 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 EIF2S1P05198 315 aaKnown RBP3.94□□□□□ -1.78
PMS1-203ENST00000409593 ICAM1P05362 532 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 UGT1A1P22309 533 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 AHRP35869 848 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 MPP1Q00013 466 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 NIPAL4Q0D2K0 466 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 LRMPQ12912 555 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 FAM72AQ5TYM5 149 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 NSUN5P2Q63ZY6 315 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 FAM72DQ6L9T8 149 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 PLEKHM3Q6ZWE6 761 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 CCDC190Q86UF4 302 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 FAM72BQ86X60 149 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 FOXP4Q8IVH2 680 aaPredicted RBP3.94□□□□□ -1.78
PMS1-203ENST00000409593 OR8K5Q8NH50 307 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 PPP4R1Q8TF05 950 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 SGCDQ92629 289 aa3.94□□□□□ -1.78
PMS1-203ENST00000409593 ARHGEF2Q92974 986 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms