RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 SLC2A4P14672 509 aa16.7■□□□□ 0.26
SCRN1-203ENST00000409570 UBE2IP63279 158 aaKnown RBP16.7■□□□□ 0.26
SCRN1-203ENST00000409570 SH3BP2P78314 561 aa16.7■□□□□ 0.26
SCRN1-203ENST00000409570 DPYSL2Q16555 572 aa16.7■□□□□ 0.26
SCRN1-203ENST00000409570 TMCO3Q6UWJ1 677 aa16.7■□□□□ 0.26
SCRN1-203ENST00000409570 POLNQ7Z5Q5 900 aa16.7■□□□□ 0.26
SCRN1-203ENST00000409570 ATPAF2Q8N5M1 289 aa16.7■□□□□ 0.26
SCRN1-203ENST00000409570 SSC4DQ8WTU2 575 aa16.7■□□□□ 0.26
SCRN1-203ENST00000409570 STAMBPL1Q96FJ0 436 aa16.7■□□□□ 0.26
SCRN1-203ENST00000409570 NT5MQ9NPB1 228 aa16.7■□□□□ 0.26
SCRN1-203ENST00000409570 CELSR2Q9HCU4 2923 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 OR5K4A6NMS3 321 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 TTLL8A6PVC2 850 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 FADS2P1A8MWK0 482 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 CREG1O75629 220 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 DNAJB5O75953 348 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 NDUFA10O95299 355 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 CLDN7O95471 211 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 IL1R2P27930 398 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 ARL4AP40617 200 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 SEPHS1P49903 392 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 CDH6P55285 790 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 CCDC183Q5T5S1 534 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 IRF2BP2Q7Z5L9 587 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 APLFQ8IW19 511 aaPredicted RBP16.69■□□□□ 0.26
SCRN1-203ENST00000409570 TEX26Q8N6G2 289 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 EFCAB3Q8N7B9 438 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 CPT1CQ8TCG5 803 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 NSMCE1Q8WV22 266 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 PLEKHG4BQ96PX9 1271 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 OR6C1Q96RD1 312 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 TRIM55Q9BYV6 548 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 TWSG1Q9GZX9 223 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 RMI1Q9H9A7 625 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 UCK1Q9HA47 277 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 KCND3Q9UK17 655 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 PCDHGA6Q9Y5G7 932 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 SLC30A1Q9Y6M5 507 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 SPTBP11277 2137 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 DOPEY1Q5JWR5 2465 aa16.69■□□□□ 0.26
SCRN1-203ENST00000409570 GOLGA6L3A6NEY3 463 aa16.68■□□□□ 0.26
SCRN1-203ENST00000409570 LGALS16A8MUM7 142 aa16.68■□□□□ 0.26
SCRN1-203ENST00000409570 RECKO95980 971 aa16.68■□□□□ 0.26
SCRN1-203ENST00000409570 ATP1A3P13637 1013 aa16.68■□□□□ 0.26
SCRN1-203ENST00000409570 TCF4P15884 667 aa16.68■□□□□ 0.26
SCRN1-203ENST00000409570 FERP16591 822 aa16.68■□□□□ 0.26
SCRN1-203ENST00000409570 TYRP1P17643 537 aa16.68■□□□□ 0.26
SCRN1-203ENST00000409570 EPHB1P54762 984 aa16.68■□□□□ 0.26
SCRN1-203ENST00000409570 SEMA5AQ13591 1074 aa16.68■□□□□ 0.26
SCRN1-203ENST00000409570 DNASE1L3Q13609 305 aa16.68■□□□□ 0.26
SCRN1-203ENST00000409570 IL11RAQ14626 422 aa16.68■□□□□ 0.26
SCRN1-203ENST00000409570 SMTNL2Q2TAL5 461 aa16.68■□□□□ 0.26
SCRN1-203ENST00000409570 PPP1R2P3Q6NXS1 205 aa16.68■□□□□ 0.26
SCRN1-203ENST00000409570 RASGRP3Q8IV61 690 aa16.68■□□□□ 0.26
SCRN1-203ENST00000409570 RAVER1Q8IY67 606 aaKnown RBP16.68■□□□□ 0.26
SCRN1-203ENST00000409570 AVL9Q8NBF6 648 aa16.68■□□□□ 0.26
SCRN1-203ENST00000409570 TGM7Q96PF1 710 aa16.68■□□□□ 0.26
SCRN1-203ENST00000409570 CSPG4P5Q96PW8 444 aa16.68■□□□□ 0.26
SCRN1-203ENST00000409570 ERGIC2Q96RQ1 377 aa16.68■□□□□ 0.26
SCRN1-203ENST00000409570 ZNF768Q9H5H4 540 aaKnown RBP16.68■□□□□ 0.26
SCRN1-203ENST00000409570 FANCLQ9NW38 375 aa16.68■□□□□ 0.26
SCRN1-203ENST00000409570 SCHIP1Q9P0W5 487 aaPredicted RBP16.68■□□□□ 0.26
SCRN1-203ENST00000409570 CHKBQ9Y259 395 aa16.68■□□□□ 0.26
SCRN1-203ENST00000409570 PIPSLA2A3N6 862 aa16.67■□□□□ 0.26
SCRN1-203ENST00000409570 TOX3O15405 576 aaPredicted RBP16.67■□□□□ 0.26
SCRN1-203ENST00000409570 GRID2O43424 1007 aa16.67■□□□□ 0.26
SCRN1-203ENST00000409570 NUAK1O60285 661 aa16.67■□□□□ 0.26
SCRN1-203ENST00000409570 SEMA7AO75326 666 aa16.67■□□□□ 0.26
SCRN1-203ENST00000409570 SPAG6O75602 509 aa16.67■□□□□ 0.26
SCRN1-203ENST00000409570 PRLP01236 227 aa16.67■□□□□ 0.26
SCRN1-203ENST00000409570 FGF5P12034 268 aa16.67■□□□□ 0.26
SCRN1-203ENST00000409570 XRCC1P18887 633 aaPredicted RBP16.67■□□□□ 0.26
SCRN1-203ENST00000409570 GARSP41250 739 aaKnown RBP16.67■□□□□ 0.26
SCRN1-203ENST00000409570 LEPRP48357 1165 aaKnown RBP16.67■□□□□ 0.26
SCRN1-203ENST00000409570 CLCNKAP51800 687 aa16.67■□□□□ 0.26
SCRN1-203ENST00000409570 ITKQ08881 620 aa16.67■□□□□ 0.26
SCRN1-203ENST00000409570 HENMT1Q5T8I9 393 aaKnown RBP16.67■□□□□ 0.26
SCRN1-203ENST00000409570 SASS6Q6UVJ0 657 aa16.67■□□□□ 0.26
SCRN1-203ENST00000409570 TMEM26Q6ZUK4 368 aa16.67■□□□□ 0.26
SCRN1-203ENST00000409570 CT55Q8WUE5 264 aa16.67■□□□□ 0.26
SCRN1-203ENST00000409570 ELMO2Q96JJ3 720 aa16.67■□□□□ 0.26
SCRN1-203ENST00000409570 CARD9Q9H257 536 aa16.67■□□□□ 0.26
SCRN1-203ENST00000409570 RCOR3Q9P2K3 495 aaPredicted RBP16.67■□□□□ 0.26
SCRN1-203ENST00000409570 LIMA1Q9UHB6 759 aaKnown RBP16.67■□□□□ 0.26
SCRN1-203ENST00000409570 LNPEPQ9UIQ6 1025 aa16.67■□□□□ 0.26
SCRN1-203ENST00000409570 DNPEPQ9ULA0 475 aa16.67■□□□□ 0.26
SCRN1-203ENST00000409570 PADI1Q9ULC6 663 aa16.67■□□□□ 0.26
SCRN1-203ENST00000409570 ADGRG1Q9Y653 693 aa16.67■□□□□ 0.26
SCRN1-203ENST00000409570 LRBAP50851 2863 aa16.66■□□□□ 0.26
SCRN1-203ENST00000409570 SEC16AO15027 2179 aa16.66■□□□□ 0.26
SCRN1-203ENST00000409570 UBXN7O94888 489 aa16.66■□□□□ 0.26
SCRN1-203ENST00000409570 CCDC172P0C7W6 258 aa16.66■□□□□ 0.26
SCRN1-203ENST00000409570 ZNF8P17098 575 aaPredicted RBP16.66■□□□□ 0.26
SCRN1-203ENST00000409570 PCK1P35558 622 aa16.66■□□□□ 0.26
SCRN1-203ENST00000409570 SLC19A1P41440 591 aa16.66■□□□□ 0.26
SCRN1-203ENST00000409570 SPINT3P49223 89 aa16.66■□□□□ 0.26
SCRN1-203ENST00000409570 DSC2Q02487 901 aa16.66■□□□□ 0.26
SCRN1-203ENST00000409570 UBXN1Q04323 297 aa16.66■□□□□ 0.26
SCRN1-203ENST00000409570 ALG1LQ6GMV1 187 aa16.66■□□□□ 0.26
SCRN1-203ENST00000409570 PHYKPLQ8IUZ5 450 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms