RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 CKMT1AP12532 417 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 UGT1A6P19224 532 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 UGT1A1P22309 533 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 UGT1A4P22310 534 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 PSMA3P25788 255 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 UGT1A3P35503 534 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 UGT1A5P35504 534 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 ADCY8P40145 1251 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 XIAPP98170 497 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 ILF3Q12906 894 aaKnown RBP eCLIP19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 LRP8Q14114 963 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 KCNJ11Q14654 390 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 SKIDA1Q1XH10 827 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 C6orf132Q5T0Z8 1188 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 ZNF398Q8TD17 642 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 STYXQ8WUJ0 223 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 TRIM44Q96DX7 344 aaPredicted RBP19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 DNAJC1Q96KC8 554 aaKnown RBP19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 RANBP9Q96S59 729 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 BOCQ9BWV1 1114 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 UGT1A7Q9HAW7 530 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 UGT1A10Q9HAW8 530 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 UGT1A8Q9HAW9 530 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 ARFGAP3Q9NP61 516 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 NLE1Q9NVX2 485 aaPredicted RBP19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 SMOXQ9NWM0 555 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 ATXN10Q9UBB4 475 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 ZNHIT2Q9UHR6 403 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 APOBEC2Q9Y235 224 aaKnown RBP19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 GPSM3Q9Y4H4 160 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 HEATR9A2RTY3 570 aa19.64■□□□□ 0.73
PDLIM2-207ENST00000409417 VEGFDO43915 354 aa19.64■□□□□ 0.73
PDLIM2-207ENST00000409417 DNAJC3Q13217 504 aa19.64■□□□□ 0.73
PDLIM2-207ENST00000409417 NFATC2Q13469 925 aa19.64■□□□□ 0.73
PDLIM2-207ENST00000409417 CCDC38Q502W7 563 aa19.64■□□□□ 0.73
PDLIM2-207ENST00000409417 ADGRG6Q86SQ4 1221 aa19.64■□□□□ 0.73
PDLIM2-207ENST00000409417 SLCO6A1Q86UG4 719 aa19.64■□□□□ 0.73
PDLIM2-207ENST00000409417 DDHD1Q8NEL9 900 aa19.64■□□□□ 0.73
PDLIM2-207ENST00000409417 CCL4L1Q8NHW4 92 aa19.64■□□□□ 0.73
PDLIM2-207ENST00000409417 RUNDC3BQ96NL0 473 aa19.64■□□□□ 0.73
PDLIM2-207ENST00000409417 GSDMCQ9BYG8 508 aa19.64■□□□□ 0.73
PDLIM2-207ENST00000409417 GPR34Q9UPC5 381 aa19.64■□□□□ 0.73
PDLIM2-207ENST00000409417 SPEGQ15772 3267 aa19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 LY6G6EA0A0G2JKS1 128 aa19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 TCRBV7S3A2A0A539 114 aa19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 H7C0S8 307 aa19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 CCDC188H7C350 402 aa19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 GPR39O43194 453 aa19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 MTX2O75431 263 aa19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 DKK1O94907 266 aa19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 ZNF8P17098 575 aaPredicted RBP19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 ADRA1DP25100 572 aa19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 TMPRSS15P98073 1019 aa19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 CTBSQ01459 385 aa19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 PEX6Q13608 980 aa19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 PPP1R7Q15435 360 aa19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 KHDC1Q4VXA5 237 aaKnown RBP19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 LDLRAP1Q5SW96 308 aa19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 ZNF648Q5T619 568 aaPredicted RBP19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 LRRC8BQ6P9F7 803 aa19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 NLRP9Q7RTR0 991 aa19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 NRROSQ86YC3 692 aa19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 GDAP1Q8TB36 358 aa19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 CPT1BQ92523 772 aa19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 C16orf45Q96MC5 204 aaPredicted RBP19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 ASB8Q9H765 288 aa19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 BFARQ9NZS9 450 aa19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 RIMKLBQ9ULI2 386 aa19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 PCDHGA1Q9Y5H4 931 aa19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 ST14Q9Y5Y6 855 aa19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 U3KQA8 63 aa19.63■□□□□ 0.73
PDLIM2-207ENST00000409417 AGAP14A8MT82 685 aa19.62■□□□□ 0.73
PDLIM2-207ENST00000409417 CCL22O00626 93 aa19.62■□□□□ 0.73
PDLIM2-207ENST00000409417 CHUKO15111 745 aa19.62■□□□□ 0.73
PDLIM2-207ENST00000409417 GRID2O43424 1007 aa19.62■□□□□ 0.73
PDLIM2-207ENST00000409417 CDK14O94921 469 aa19.62■□□□□ 0.73
PDLIM2-207ENST00000409417 ACP1P24666 158 aa19.62■□□□□ 0.73
PDLIM2-207ENST00000409417 NPY2RP49146 381 aa19.62■□□□□ 0.73
PDLIM2-207ENST00000409417 ACADVLP49748 655 aa19.62■□□□□ 0.73
PDLIM2-207ENST00000409417 DUSP3P51452 185 aaPredicted RBP19.62■□□□□ 0.73
PDLIM2-207ENST00000409417 SESN2P58004 480 aaPredicted RBP19.62■□□□□ 0.73
PDLIM2-207ENST00000409417 SARNPP82979 210 aaKnown RBP19.62■□□□□ 0.73
PDLIM2-207ENST00000409417 DAB2P98082 770 aa19.62■□□□□ 0.73
PDLIM2-207ENST00000409417 GPRC6AQ5T6X5 926 aa19.62■□□□□ 0.73
PDLIM2-207ENST00000409417 KLHL7Q8IXQ5 586 aa19.62■□□□□ 0.73
PDLIM2-207ENST00000409417 FAM46DQ8NEK8 389 aa19.62■□□□□ 0.73
PDLIM2-207ENST00000409417 GLMNQ92990 594 aa19.62■□□□□ 0.73
PDLIM2-207ENST00000409417 CDKN2AIPNLQ96HQ2 116 aa19.62■□□□□ 0.73
PDLIM2-207ENST00000409417 ZCCHC2Q9C0B9 1178 aaKnown RBP19.62■□□□□ 0.73
PDLIM2-207ENST00000409417 IL22Q9GZX6 179 aa19.62■□□□□ 0.73
PDLIM2-207ENST00000409417 EVA1BQ9NVM1 165 aa19.62■□□□□ 0.73
PDLIM2-207ENST00000409417 PRKAB1Q9Y478 270 aa19.62■□□□□ 0.73
PDLIM2-207ENST00000409417 TCAF1Q9Y4C2 921 aa19.62■□□□□ 0.73
PDLIM2-207ENST00000409417 PCYT1BQ9Y5K3 369 aaPredicted RBP19.62■□□□□ 0.73
PDLIM2-207ENST00000409417 BPTFQ12830 3046 aa19.62■□□□□ 0.73
PDLIM2-207ENST00000409417 TRIM16O95361 564 aa19.61■□□□□ 0.73
PDLIM2-207ENST00000409417 ADRB1P08588 477 aa19.61■□□□□ 0.73
PDLIM2-207ENST00000409417 CDK4P11802 303 aa19.61■□□□□ 0.73
PDLIM2-207ENST00000409417 ITGALP20701 1170 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms