RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 SPATS2LQ9NUQ6 558 aaKnown RBP13.82□□□□□ -0.2
SEC13-204ENST00000397099 AKAP7Q9P0M2 348 aaPredicted RBP13.82□□□□□ -0.2
SEC13-204ENST00000397099 ZNHIT2Q9UHR6 403 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 CNOT6Q9ULM6 557 aaKnown RBP13.82□□□□□ -0.2
SEC13-204ENST00000397099 SHOC2Q9UQ13 582 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 TMEM98Q9Y2Y6 226 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 PKP3Q9Y446 797 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 ENTPD2Q9Y5L3 495 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 COL27A1Q8IZC6 1860 aaPredicted RBP13.82□□□□□ -0.2
SEC13-204ENST00000397099 SCN8AQ9UQD0 1980 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 A0A0U1RQS6 177 aa13.81□□□□□ -0.2
SEC13-204ENST00000397099 NUAK1O60285 661 aa13.81□□□□□ -0.2
SEC13-204ENST00000397099 KCNJ13O60928 360 aa13.81□□□□□ -0.2
SEC13-204ENST00000397099 PYGMP11217 842 aa13.81□□□□□ -0.2
SEC13-204ENST00000397099 FASLGP48023 281 aa13.81□□□□□ -0.2
SEC13-204ENST00000397099 INHBCP55103 352 aa13.81□□□□□ -0.2
SEC13-204ENST00000397099 PCBP4P57723 403 aaKnown RBP13.81□□□□□ -0.2
SEC13-204ENST00000397099 ITGA9Q13797 1035 aa13.81□□□□□ -0.2
SEC13-204ENST00000397099 SIRPB2Q5JXA9 342 aa13.81□□□□□ -0.2
SEC13-204ENST00000397099 SLC30A9Q6PML9 568 aa13.81□□□□□ -0.2
SEC13-204ENST00000397099 SPRED1Q7Z699 444 aa13.81□□□□□ -0.2
SEC13-204ENST00000397099 GPR26Q8NDV2 337 aa13.81□□□□□ -0.2
SEC13-204ENST00000397099 ZNF248Q8NDW4 579 aa13.81□□□□□ -0.2
SEC13-204ENST00000397099 ALG3Q92685 438 aa13.81□□□□□ -0.2
SEC13-204ENST00000397099 GLYATL1Q969I3 302 aa13.81□□□□□ -0.2
SEC13-204ENST00000397099 SH3KBP1Q96B97 665 aa13.81□□□□□ -0.2
SEC13-204ENST00000397099 EID2BQ96D98 161 aa13.81□□□□□ -0.2
SEC13-204ENST00000397099 NAF1Q96HR8 494 aaKnown RBP13.81□□□□□ -0.2
SEC13-204ENST00000397099 HES6Q96HZ4 224 aa13.81□□□□□ -0.2
SEC13-204ENST00000397099 MRGPRX2Q96LB1 330 aa13.81□□□□□ -0.2
SEC13-204ENST00000397099 SPATA13Q96N96 652 aa13.81□□□□□ -0.2
SEC13-204ENST00000397099 ZCCHC2Q9C0B9 1178 aaKnown RBP13.81□□□□□ -0.2
SEC13-204ENST00000397099 UBP1Q9NZI7 540 aa13.81□□□□□ -0.2
SEC13-204ENST00000397099 RNF215Q9Y6U7 377 aa13.81□□□□□ -0.2
SEC13-204ENST00000397099 CACNA1GO43497 2377 aa13.81□□□□□ -0.2
SEC13-204ENST00000397099 KIR2DS5A0A0G2JLQ3 304 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 A0A0G2JNG1 304 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 C5orf60A6NFR6 353 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 C2orf81A6NN90 581 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 FADS2P1A8MWK0 482 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 KIR2DS3K7RE56 304 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 KMOO15229 486 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 KCNN4O15554 427 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 GRID2O43424 1007 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 ECEL1O95672 775 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 CPNE6O95741 557 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 ITGA2BP08514 1039 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 BPIP17213 487 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 VCLP18206 1134 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 AK4P27144 223 aaPredicted RBP13.8□□□□□ -0.2
SEC13-204ENST00000397099 CCL7P80098 99 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 GPLD1P80108 840 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 SQSTM1Q13501 440 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 KIR2DS5Q14953 304 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 ANKRD20A2Q5SQ80 823 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 ANKRD20A1Q5TYW2 823 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 ANKRD20A3Q5VUR7 823 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 ZNF662Q6ZS27 426 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 B4GALNT4Q76KP1 1039 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 GLT6D1Q7Z4J2 308 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 PIM3Q86V86 326 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 IPMKQ8NFU5 416 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 ATXN7L3BQ96GX2 97 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 OXNAD1Q96HP4 312 aaPredicted RBP13.8□□□□□ -0.2
SEC13-204ENST00000397099 SLC46A1Q96NT5 459 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.8□□□□□ -0.2
SEC13-204ENST00000397099 DPH1Q9BZG8 443 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 EPB41L1Q9H4G0 881 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 SUDS3Q9H7L9 328 aaPredicted RBP13.8□□□□□ -0.2
SEC13-204ENST00000397099 ADGRG1Q9Y653 693 aa13.8□□□□□ -0.2
SEC13-204ENST00000397099 LOC400499M0QZD8 3231 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 A0A1W2PQM1 296 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 KLHL33A6NCF5 533 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 CHUKO15111 745 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 PSMD3O43242 534 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 CRTAMO95727 393 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 ATP1A1P05023 1023 aaKnown RBP13.79□□□□□ -0.2
SEC13-204ENST00000397099 PIRTP0C851 137 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 SPAM1P38567 509 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 UCNP55089 124 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 GTF2H3Q13889 308 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 P3H1Q32P28 736 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 SOWAHCQ53LP3 525 aaPredicted RBP13.79□□□□□ -0.2
SEC13-204ENST00000397099 C3orf38Q5JPI3 329 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 LDLRAP1Q5SW96 308 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 FOXR1Q6PIV2 292 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 RANBP10Q6VN20 620 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 NYAP1Q6ZVC0 841 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 MARK2Q7KZI7 788 aaKnown RBP13.79□□□□□ -0.2
SEC13-204ENST00000397099 CHST15Q7LFX5 561 aaPredicted RBP13.79□□□□□ -0.2
SEC13-204ENST00000397099 TRIM74Q86UV6 250 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 LRRTM4Q86VH4 590 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 NAGSQ8N159 534 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 SFRP1Q8N474 314 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 ZNF514Q96K75 400 aaPredicted RBP13.79□□□□□ -0.2
SEC13-204ENST00000397099 TTC25Q96NG3 672 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 ALS2CR12Q96Q35 445 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 CMKLR1Q99788 373 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 TIMM29Q9BSF4 260 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 DESI2Q9BSY9 194 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms