RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 RFLNAQ6ZTI6 216 aa17.31■□□□□ 0.36
EXOSC3-202ENST00000396521 APTXQ7Z2E3 356 aaKnown RBP17.31■□□□□ 0.36
EXOSC3-202ENST00000396521 NIPA2Q8N8Q9 360 aa17.31■□□□□ 0.36
EXOSC3-202ENST00000396521 MAML1Q92585 1016 aa17.31■□□□□ 0.36
EXOSC3-202ENST00000396521 C9orf72Q96LT7 481 aa17.31■□□□□ 0.36
EXOSC3-202ENST00000396521 TSGA13Q96PP4 275 aa17.31■□□□□ 0.36
EXOSC3-202ENST00000396521 AGAP2Q99490 1192 aa17.31■□□□□ 0.36
EXOSC3-202ENST00000396521 HAUS4Q9H6D7 363 aa17.31■□□□□ 0.36
EXOSC3-202ENST00000396521 LRRC4CQ9HCJ2 640 aa17.31■□□□□ 0.36
EXOSC3-202ENST00000396521 PCDH18Q9HCL0 1135 aa17.31■□□□□ 0.36
EXOSC3-202ENST00000396521 APMAPQ9HDC9 416 aa17.31■□□□□ 0.36
EXOSC3-202ENST00000396521 PRDM8Q9NQV8 689 aa17.31■□□□□ 0.36
EXOSC3-202ENST00000396521 SIDT1Q9NXL6 827 aaKnown RBP17.31■□□□□ 0.36
EXOSC3-202ENST00000396521 CNOT6Q9ULM6 557 aaKnown RBP17.31■□□□□ 0.36
EXOSC3-202ENST00000396521 USP9XQ93008 2570 aaPredicted RBP17.31■□□□□ 0.36
EXOSC3-202ENST00000396521 SPTBN1Q01082 2364 aaKnown RBP17.3■□□□□ 0.36
EXOSC3-202ENST00000396521 GRID2O43424 1007 aa17.3■□□□□ 0.36
EXOSC3-202ENST00000396521 ATP1A1P05023 1023 aaKnown RBP17.3■□□□□ 0.36
EXOSC3-202ENST00000396521 CCNYL3P0C7X3 344 aa17.3■□□□□ 0.36
EXOSC3-202ENST00000396521 ACP5P13686 325 aa17.3■□□□□ 0.36
EXOSC3-202ENST00000396521 CCNCP24863 283 aa17.3■□□□□ 0.36
EXOSC3-202ENST00000396521 DLSTP36957 453 aa17.3■□□□□ 0.36
EXOSC3-202ENST00000396521 GARSP41250 739 aaKnown RBP17.3■□□□□ 0.36
EXOSC3-202ENST00000396521 FOXM1Q08050 763 aa17.3■□□□□ 0.36
EXOSC3-202ENST00000396521 PTPRRQ15256 657 aa17.3■□□□□ 0.36
EXOSC3-202ENST00000396521 STX1AQ16623 288 aa17.3■□□□□ 0.36
EXOSC3-202ENST00000396521 IFI16Q16666 785 aaKnown RBP17.3■□□□□ 0.36
EXOSC3-202ENST00000396521 SMTNL2Q2TAL5 461 aa17.3■□□□□ 0.36
EXOSC3-202ENST00000396521 RBM12BQ8IXT5 1001 aaKnown RBP17.3■□□□□ 0.36
EXOSC3-202ENST00000396521 TDRD1Q9BXT4 1180 aaKnown RBP17.3■□□□□ 0.36
EXOSC3-202ENST00000396521 ADGRE3Q9BY15 652 aa17.3■□□□□ 0.36
EXOSC3-202ENST00000396521 ISCUQ9H1K1 167 aa17.3■□□□□ 0.36
EXOSC3-202ENST00000396521 RAD18Q9NS91 495 aa17.3■□□□□ 0.36
EXOSC3-202ENST00000396521 IP6K2Q9UHH9 426 aa17.3■□□□□ 0.36
EXOSC3-202ENST00000396521 KCNK6Q9Y257 313 aa17.3■□□□□ 0.36
EXOSC3-202ENST00000396521 PCDHGA6Q9Y5G7 932 aa17.3■□□□□ 0.36
EXOSC3-202ENST00000396521 GOLGA6L3A6NEY3 463 aa17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 LRRC53A6NM62 1247 aa17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 SNX2O60749 519 aa17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 RFPL1O75677 317 aa17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 UBXN7O94888 489 aa17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 CLDN7O95471 211 aa17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 MAPK9P45984 424 aa17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 UBE2IP63279 158 aaKnown RBP17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 KLHL30Q0D2K2 578 aa17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 GALNT2Q10471 571 aa17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 KRT81Q14533 505 aa17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 C4orf17Q53FE4 359 aa17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 PDPK2PQ6A1A2 396 aa17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 CLEC17AQ6ZS10 378 aa17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 TMEM26Q6ZUK4 368 aa17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 ZNF571Q7Z3V5 609 aaPredicted RBP17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 FAM71BQ8TC56 605 aa17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 STAMBPL1Q96FJ0 436 aa17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 FCRL4Q96PJ5 515 aa17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 MLPHQ9BV36 600 aaPredicted RBP17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 PCDH9Q9HC56 1237 aa17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 TRIM39Q9HCM9 518 aa17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 RBM22Q9NW64 420 aaKnown RBP eCLIP17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 KLHL3Q9UH77 587 aa17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 PADI1Q9ULC6 663 aa17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 CHKBQ9Y259 395 aa17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 PLAAQ9Y263 795 aa17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 TP53TG5Q9Y2B4 290 aa17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 OAS3Q9Y6K5 1087 aaKnown RBP17.29■□□□□ 0.36
EXOSC3-202ENST00000396521 C1orf232A0A0U1RR37 186 aa17.28■□□□□ 0.36
EXOSC3-202ENST00000396521 C21orf140B9A014 251 aa17.28■□□□□ 0.36
EXOSC3-202ENST00000396521 MTA2O94776 668 aa17.28■□□□□ 0.36
EXOSC3-202ENST00000396521 VIPP01282 170 aa17.28■□□□□ 0.36
EXOSC3-202ENST00000396521 AMD1P17707 334 aa17.28■□□□□ 0.36
EXOSC3-202ENST00000396521 MX2P20592 715 aa17.28■□□□□ 0.36
EXOSC3-202ENST00000396521 PAFAH1B3Q15102 231 aaKnown RBP17.28■□□□□ 0.36
EXOSC3-202ENST00000396521 HADHQ16836 314 aaKnown RBP17.28■□□□□ 0.36
EXOSC3-202ENST00000396521 FILIP1LQ4L180 1135 aa17.28■□□□□ 0.36
EXOSC3-202ENST00000396521 ASB18Q6ZVZ8 466 aa17.28■□□□□ 0.36
EXOSC3-202ENST00000396521 BPHLQ86WA6 291 aaPredicted RBP17.28■□□□□ 0.36
EXOSC3-202ENST00000396521 APLFQ8IW19 511 aaPredicted RBP17.28■□□□□ 0.36
EXOSC3-202ENST00000396521 TRIM48Q8IWZ4 208 aa17.28■□□□□ 0.36
EXOSC3-202ENST00000396521 ZDHHC12Q96GR4 267 aa17.28■□□□□ 0.36
EXOSC3-202ENST00000396521 PLEKHG4BQ96PX9 1271 aa17.28■□□□□ 0.36
EXOSC3-202ENST00000396521 ZSCAN5AQ9BUG6 496 aa17.28■□□□□ 0.36
EXOSC3-202ENST00000396521 TBC1D10AQ9BXI6 508 aa17.28■□□□□ 0.36
EXOSC3-202ENST00000396521 NAT10Q9H0A0 1025 aaKnown RBP17.28■□□□□ 0.36
EXOSC3-202ENST00000396521 ZNF768Q9H5H4 540 aaKnown RBP17.28■□□□□ 0.36
EXOSC3-202ENST00000396521 MYO1AQ9UBC5 1043 aa17.28■□□□□ 0.36
EXOSC3-202ENST00000396521 PRKAB1Q9Y478 270 aa17.28■□□□□ 0.36
EXOSC3-202ENST00000396521 BZW2Q9Y6E2 419 aaKnown RBP17.28■□□□□ 0.36
EXOSC3-202ENST00000396521 A0A0U1RQS6 177 aa17.27■□□□□ 0.36
EXOSC3-202ENST00000396521 ANKRD66B4E2M5 251 aa17.27■□□□□ 0.36
EXOSC3-202ENST00000396521 DDX3XO00571 662 aaKnown RBP eCLIP17.27■□□□□ 0.363e-15■■□□□ 13.5
EXOSC3-202ENST00000396521 VPS4BO75351 444 aa17.27■□□□□ 0.36
EXOSC3-202ENST00000396521 PRLP01236 227 aa17.27■□□□□ 0.36
EXOSC3-202ENST00000396521 FGF5P12034 268 aa17.27■□□□□ 0.36
EXOSC3-202ENST00000396521 IL4RP24394 825 aa17.27■□□□□ 0.36
EXOSC3-202ENST00000396521 PMS2P54278 862 aa17.27■□□□□ 0.36
EXOSC3-202ENST00000396521 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.27■□□□□ 0.36
EXOSC3-202ENST00000396521 PRSS42Q7Z5A4 293 aa17.27■□□□□ 0.36
EXOSC3-202ENST00000396521 RASGRP3Q8IV61 690 aa17.27■□□□□ 0.36
EXOSC3-202ENST00000396521 MAP7D3Q8IWC1 876 aa17.27■□□□□ 0.36
EXOSC3-202ENST00000396521 ARRDC2Q8TBH0 407 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 168.9 ms