RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 CLDN7O95471 211 aa15.19■□□□□ 0.02
CHMP3-202ENST00000393773 FTLP02792 175 aaPredicted RBP15.19■□□□□ 0.02
CHMP3-202ENST00000393773 RARAP10276 462 aa15.19■□□□□ 0.02
CHMP3-202ENST00000393773 GZMAP12544 262 aa15.19■□□□□ 0.02
CHMP3-202ENST00000393773 DLSTP36957 453 aa15.19■□□□□ 0.02
CHMP3-202ENST00000393773 EPHB1P54762 984 aa15.19■□□□□ 0.02
CHMP3-202ENST00000393773 SLC25A11Q02978 314 aaKnown RBP15.19■□□□□ 0.02
CHMP3-202ENST00000393773 GALNT2Q10471 571 aa15.19■□□□□ 0.02
CHMP3-202ENST00000393773 BOLA3Q53S33 107 aa15.19■□□□□ 0.02
CHMP3-202ENST00000393773 TEKT4Q8WW24 435 aa15.19■□□□□ 0.02
CHMP3-202ENST00000393773 MAML1Q92585 1016 aa15.19■□□□□ 0.02
CHMP3-202ENST00000393773 C9orf72Q96LT7 481 aa15.19■□□□□ 0.02
CHMP3-202ENST00000393773 ZNF768Q9H5H4 540 aaKnown RBP15.19■□□□□ 0.02
CHMP3-202ENST00000393773 HAUS4Q9H6D7 363 aa15.19■□□□□ 0.02
CHMP3-202ENST00000393773 RMI1Q9H9A7 625 aa15.19■□□□□ 0.02
CHMP3-202ENST00000393773 CHMP5Q9NZZ3 219 aa15.19■□□□□ 0.02
CHMP3-202ENST00000393773 CPNE7Q9UBL6 633 aa15.19■□□□□ 0.02
CHMP3-202ENST00000393773 CHKBQ9Y259 395 aa15.19■□□□□ 0.02
CHMP3-202ENST00000393773 HIVEP3Q5T1R4 2406 aa15.19■□□□□ 0.02
CHMP3-202ENST00000393773 MED13Q9UHV7 2174 aa15.18■□□□□ 0.02
CHMP3-202ENST00000393773 GOLGA6L3A6NEY3 463 aa15.18■□□□□ 0.02
CHMP3-202ENST00000393773 SNX2O60749 519 aa15.18■□□□□ 0.02
CHMP3-202ENST00000393773 GARSP41250 739 aaKnown RBP15.18■□□□□ 0.02
CHMP3-202ENST00000393773 UQCRFS1P47985 274 aa15.18■□□□□ 0.02
CHMP3-202ENST00000393773 MLLT10P55197 1068 aa15.18■□□□□ 0.02
CHMP3-202ENST00000393773 SH3BP2P78314 561 aa15.18■□□□□ 0.02
CHMP3-202ENST00000393773 ASIC2Q16515 512 aa15.18■□□□□ 0.02
CHMP3-202ENST00000393773 TMEM135Q86UB9 458 aa15.18■□□□□ 0.02
CHMP3-202ENST00000393773 PLXDC1Q8IUK5 500 aa15.18■□□□□ 0.02
CHMP3-202ENST00000393773 PHYKPLQ8IUZ5 450 aa15.18■□□□□ 0.02
CHMP3-202ENST00000393773 AVL9Q8NBF6 648 aa15.18■□□□□ 0.02
CHMP3-202ENST00000393773 GALNT6Q8NCL4 622 aa15.18■□□□□ 0.02
CHMP3-202ENST00000393773 ARRDC2Q8TBH0 407 aa15.18■□□□□ 0.02
CHMP3-202ENST00000393773 UCK1Q9HA47 277 aa15.18■□□□□ 0.02
CHMP3-202ENST00000393773 PRDM8Q9NQV8 689 aa15.18■□□□□ 0.02
CHMP3-202ENST00000393773 SCHIP1Q9P0W5 487 aaPredicted RBP15.18■□□□□ 0.02
CHMP3-202ENST00000393773 MYO1AQ9UBC5 1043 aa15.18■□□□□ 0.02
CHMP3-202ENST00000393773 LRBAP50851 2863 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 C1orf232A0A0U1RR37 186 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 OR5K4A6NMS3 321 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 MKRN2OSH3BPM6 223 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 NUAK1O60285 661 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 RFPL1O75677 317 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 PDGFAP04085 211 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 HLA-DQB2P05538 268 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 KRT7P08729 469 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 MYBL1P10243 752 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 IL4RP24394 825 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 PRKCIP41743 596 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 SPINT3P49223 89 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 CLCNKAP51800 687 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 PMS2P54278 862 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 FOXM1Q08050 763 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 ITKQ08881 620 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 MMRN1Q13201 1228 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 NCBP2-AS2Q69YL0 99 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 C6orf15Q6UXA7 325 aaPredicted RBP15.17■□□□□ 0.02
CHMP3-202ENST00000393773 ATCAYQ86WG3 371 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 LRRC49Q8IUZ0 686 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 CCDC13Q8IYE1 715 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.17■□□□□ 0.02
CHMP3-202ENST00000393773 NIPA2Q8N8Q9 360 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 LPCAT1Q8NF37 534 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 FAM71BQ8TC56 605 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 TRIM11Q96F44 468 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 PLEKHG4BQ96PX9 1271 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 CARD9Q9H257 536 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 MRPL47Q9HD33 250 aaKnown RBP15.17■□□□□ 0.02
CHMP3-202ENST00000393773 RCOR3Q9P2K3 495 aaPredicted RBP15.17■□□□□ 0.02
CHMP3-202ENST00000393773 ATXN10Q9UBB4 475 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 POLHQ9Y253 713 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 CELSR2Q9HCU4 2923 aa15.17■□□□□ 0.02
CHMP3-202ENST00000393773 TOX3O15405 576 aaPredicted RBP15.16■□□□□ 0.02
CHMP3-202ENST00000393773 GRID2O43424 1007 aa15.16■□□□□ 0.02
CHMP3-202ENST00000393773 KIAA0754O94854 1291 aa15.16■□□□□ 0.02
CHMP3-202ENST00000393773 CD48P09326 243 aa15.16■□□□□ 0.02
CHMP3-202ENST00000393773 ZNF8P17098 575 aaPredicted RBP15.16■□□□□ 0.02
CHMP3-202ENST00000393773 CAPZBP47756 277 aa15.16■□□□□ 0.02
CHMP3-202ENST00000393773 LEPRP48357 1165 aaKnown RBP15.16■□□□□ 0.02
CHMP3-202ENST00000393773 RPL26P61254 145 aaKnown RBP15.16■□□□□ 0.02
CHMP3-202ENST00000393773 NIPAL4Q0D2K0 466 aa15.16■□□□□ 0.02
CHMP3-202ENST00000393773 ERV3-1Q14264 604 aa15.16■□□□□ 0.02
CHMP3-202ENST00000393773 STX1AQ16623 288 aa15.16■□□□□ 0.02
CHMP3-202ENST00000393773 HIST2H2BCQ6DN03 193 aa15.16■□□□□ 0.02
CHMP3-202ENST00000393773 TMEM26Q6ZUK4 368 aa15.16■□□□□ 0.02
CHMP3-202ENST00000393773 ASB18Q6ZVZ8 466 aa15.16■□□□□ 0.02
CHMP3-202ENST00000393773 PRSS42Q7Z5A4 293 aa15.16■□□□□ 0.02
CHMP3-202ENST00000393773 AOPEPQ8N6M6 819 aa15.16■□□□□ 0.02
CHMP3-202ENST00000393773 FATE1Q969F0 183 aa15.16■□□□□ 0.02
CHMP3-202ENST00000393773 STAMBPL1Q96FJ0 436 aa15.16■□□□□ 0.02
CHMP3-202ENST00000393773 TGM7Q96PF1 710 aa15.16■□□□□ 0.02
CHMP3-202ENST00000393773 OR6C1Q96RD1 312 aa15.16■□□□□ 0.02
CHMP3-202ENST00000393773 ISCUQ9H1K1 167 aa15.16■□□□□ 0.02
CHMP3-202ENST00000393773 PCDH9Q9HC56 1237 aa15.16■□□□□ 0.02
CHMP3-202ENST00000393773 LMBRD1Q9NUN5 540 aa15.16■□□□□ 0.02
CHMP3-202ENST00000393773 AIPL1Q9NZN9 384 aa15.16■□□□□ 0.02
CHMP3-202ENST00000393773 AMACRQ9UHK6 382 aa15.16■□□□□ 0.02
CHMP3-202ENST00000393773 RPL26L1Q9UNX3 145 aaKnown RBP15.16■□□□□ 0.02
CHMP3-202ENST00000393773 TTLL3Q9Y4R7 772 aa15.16■□□□□ 0.02
CHMP3-202ENST00000393773 PCDHGA6Q9Y5G7 932 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms