RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 LRRC14BA6NHZ5 514 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 PRSS56P0CW18 603 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 HOXD8P13378 290 aaPredicted RBP10.48□□□□□ -0.73
CALD1-203ENST00000393118 FASP25445 335 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 PRDX6P30041 224 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 EPHB3P54753 998 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 ECT2LQ008S8 904 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 PDCD4Q53EL6 469 aaKnown RBP10.48□□□□□ -0.73
CALD1-203ENST00000393118 RETSATQ6NUM9 610 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 FAM171BQ6P995 826 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 KBTBD2Q8IY47 623 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 SLC7A5P1Q8MH63 180 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 TRPV1Q8NER1 839 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 SHKBP1Q8TBC3 707 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 TBCDQ9BTW9 1192 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 TRMOQ9BU70 441 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 MRPL9Q9BYD2 267 aaKnown RBP10.48□□□□□ -0.73
CALD1-203ENST00000393118 ACTR8Q9H981 624 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 ZFP14Q9HCL3 533 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 ORC6Q9Y5N6 252 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 E7ENX8 843 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 FBP2O00757 339 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 SYN3O14994 580 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 NIPSNAP2O75323 286 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 ZNF7P17097 686 aaPredicted RBP10.48□□□□□ -0.73
CALD1-203ENST00000393118 XKR4Q5GH76 650 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 RAB41Q5JT25 222 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 ATXN7L2Q5T6C5 722 aaPredicted RBP10.48□□□□□ -0.73
CALD1-203ENST00000393118 MILR1Q7Z6M3 343 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 HERC6Q8IVU3 1022 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 CPNE9Q8IYJ1 553 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 NKAPQ8N5F7 415 aaKnown RBP10.48□□□□□ -0.73
CALD1-203ENST00000393118 FBXO22Q8NEZ5 403 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 CDKN2AIPNLQ96HQ2 116 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 CDK5RAP1Q96SZ6 601 aaKnown RBP10.48□□□□□ -0.73
CALD1-203ENST00000393118 ZNHIT2Q9UHR6 403 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 ADAMTS6Q9UKP5 1117 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 PTGDR2Q9Y5Y4 395 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 GJB3O75712 270 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 DLGAP3O95886 979 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 GSTT2P0CG29 244 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 GSTT2BP0CG30 244 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 PKMP14618 531 aaKnown RBP10.48□□□□□ -0.73
CALD1-203ENST00000393118 SELPP16109 830 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 HOXB8P17481 243 aaPredicted RBP10.48□□□□□ -0.73
CALD1-203ENST00000393118 GABRB3P28472 473 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 TTPAP49638 278 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 CLCQ05315 142 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 BCL2L1Q07817 233 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 CCNIQ14094 377 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 BTG3Q14201 252 aaPredicted RBP10.48□□□□□ -0.73
CALD1-203ENST00000393118 USP41Q3LFD5 358 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 AASDHQ4L235 1098 aaPredicted RBP10.48□□□□□ -0.73
CALD1-203ENST00000393118 RANBP10Q6VN20 620 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 MAVSQ7Z434 540 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 SPPL2CQ8IUH8 684 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 SCAIQ8N9R8 606 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 SIDT2Q8NBJ9 832 aaKnown RBP10.48□□□□□ -0.73
CALD1-203ENST00000393118 LRTOMTQ8WZ04 291 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 GATA6Q92908 595 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 ZBTB26Q9HCK0 441 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 KLQ9UEF7 1012 aa10.48□□□□□ -0.73
CALD1-203ENST00000393118 FCF1Q9Y324 198 aaKnown RBP10.48□□□□□ -0.73
CALD1-203ENST00000393118 SLC38A8A6NNN8 435 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 H3BMM5 538 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 SNAP91O60641 907 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 LRG1P02750 347 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 PABPC4LP0CB38 370 aaKnown RBP10.47□□□□□ -0.73
CALD1-203ENST00000393118 ARSAP15289 507 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 POLD2P49005 469 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 ADAM17P78536 824 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 BOP1Q14137 746 aaKnown RBP10.47□□□□□ -0.73
CALD1-203ENST00000393118 ANKRD49Q8WVL7 239 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 SNX19Q92543 992 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 FIG4Q92562 907 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 FAM162AQ96A26 154 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 VPS33AQ96AX1 596 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 PKD2L2Q9NZM6 624 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 HCSTQ9UBK5 93 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 INSIG1O15503 277 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 DEAF1O75398 565 aaPredicted RBP10.47□□□□□ -0.73
CALD1-203ENST00000393118 CLDN11O75508 207 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 PCNAP12004 261 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 LDLRAP1Q5SW96 308 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 GPR107Q5VW38 600 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 GPRIN3Q6ZVF9 776 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 IMP4Q96G21 291 aaKnown RBP10.47□□□□□ -0.73
CALD1-203ENST00000393118 ASB2Q96Q27 587 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 CDK15Q96Q40 435 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 RTP3Q9BQQ7 232 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 TRIM8Q9BZR9 551 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.47□□□□□ -0.73
CALD1-203ENST00000393118 A0A0U1RQS6 177 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 MTMR11A4FU01 709 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 J3QRK9 145 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 KPNA4O00629 521 aaPredicted RBP10.47□□□□□ -0.73
CALD1-203ENST00000393118 SDHDO14521 159 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 CAPN1P07384 714 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 CYBAP13498 195 aa10.47□□□□□ -0.73
CALD1-203ENST00000393118 CES1P23141 567 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms