RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 LSM4Q9Y4Z0 139 aaKnown RBP1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 IGHV3OR16-10A0A075B7F0 116 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 GIMAP1-GIMAP5A0A087WTJ2 511 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 SOCS3O14543 225 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 AP2A2O94973 939 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 ZSCAN5DPP0CG00 497 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 TNNT1P13805 278 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 ATF3P18847 181 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 RBMS1P29558 406 aaKnown RBP1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 ELF1P32519 619 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 DRD3P35462 400 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 TAS2R38P59533 333 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 IGBP1P78318 339 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 POU5F1Q01860 360 aaKnown RBP1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 LRMPQ12912 555 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 STARD3Q14849 445 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 PFKFB4Q16877 469 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 LONRF1Q17RB8 773 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 C15orf32Q32M92 178 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 ARHGEF16Q5VV41 709 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 GGNBP1Q5YKI7 109 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 SULT6B1Q6IMI4 303 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 PLEKHM3Q6ZWE6 761 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 SLC46A3Q7Z3Q1 461 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 TBC1D1Q86TI0 1168 aaPredicted RBP1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 FAM160B2Q86V87 743 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 KCNMB4Q86W47 210 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 PARP8Q8N3A8 854 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 POM121L12Q8N7R1 296 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 SLC44A1Q8WWI5 657 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 CNOT9Q92600 299 aaKnown RBP1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 GTF3AQ92664 365 aaKnown RBP1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 PHF21AQ96BD5 680 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 GIMAP5Q96F15 307 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 CCDC138Q96M89 665 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 RHNO1Q9BSD3 238 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 LRMDAQ9H2I8 198 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 SEBOXQ9HB31 216 aaPredicted RBP1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 TRPC7Q9HCX4 862 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 G6PC2Q9NQR9 355 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 PTTG2Q9NZH5 202 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 KLHL20Q9Y2M5 609 aa1.11□□□□□ -2.23
RNU6-239P-201ENST00000390990 A0A0G2JNG1 304 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 OR5K3A6NET4 321 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 SRRM4A7MD48 611 aaKnown RBP1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 H0YIN7 160 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 TNPO2O14787 897 aaKnown RBP1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 PER2O15055 1255 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 MLYCDO95822 493 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 FTCDO95954 541 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 MCCP23508 829 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 CLDN20P56880 219 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 CSNK2A1P68400 391 aaPredicted RBP1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 FOXM1Q08050 763 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 GALNT1Q10472 559 aaPredicted RBP1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 NFATC2Q13469 925 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 DRP2Q13474 957 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 HNRNPDQ14103 355 aaKnown RBP1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 RFTN1Q14699 578 aaPredicted RBP1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 KIR2DS5Q14953 304 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 ALS2CLQ60I27 953 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 C18orf63Q68DL7 685 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 GPAT4Q86UL3 456 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 GPR180Q86V85 440 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 NRROSQ86YC3 692 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 MARCH9Q86YJ5 346 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 DHX40Q8IX18 779 aaKnown RBP1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 ZCCHC9Q8N567 271 aaKnown RBP1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 TMEM178AQ8NBL3 297 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 CSNK2A3Q8NEV1 391 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 THAP6Q8TBB0 222 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 JDP2Q8WYK2 163 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 GOLGA1Q92805 767 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 TMEM41AQ96HV5 264 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 PRMT6Q96LA8 375 aaPredicted RBP1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 TKTL2Q9H0I9 626 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 UPF3AQ9H1J1 476 aaKnown RBP1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 TAF1DQ9H5J8 278 aaPredicted RBP1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 EPHX3Q9H6B9 360 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 SNTG1Q9NSN8 517 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 RNF186Q9NXI6 227 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 NUDT4Q9NZJ9 180 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 TCEAL9Q9UHQ7 104 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 CDC23Q9UJX2 597 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 POMT2Q9UKY4 750 aa1.1□□□□□ -2.23
RNU6-239P-201ENST00000390990 TEX22C9J3V5 150 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 SPINT2O43291 252 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 WISP2O76076 250 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 CLDN1O95832 211 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 HNRNPA1P09651 372 aaKnown RBP eCLIP1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 SERPINF1P36955 418 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 FASLGP48023 281 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 PRKAA2P54646 552 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 NDPQ00604 133 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 PAX8Q06710 450 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 DECR1Q16698 335 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 PNLIPRP3Q17RR3 467 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 TCTN1Q2MV58 587 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 SERTAD4-AS1Q5TG53 156 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 FRG2Q64ET8 278 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms