RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 TLR6Q9Y2C9 796 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 NDUFAF1Q9Y375 327 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 A0A1W2PQ45 241 aaPredicted RBP16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 A0A1W2PQY0 241 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 ASPDHA6ND91 283 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 AZIN1O14977 448 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 B4GAT1O43505 415 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 TLR5O60602 858 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 PQBP1O60828 265 aaKnown RBP16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 CCT8P50990 548 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 DSC1Q08554 894 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 ESAMQ96AP7 390 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 NPLQ9BXD5 320 aaPredicted RBP16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 SMPD4Q9NXE4 827 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 LDB2O43679 373 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 GFAPP14136 432 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 MYF6P23409 242 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 PAGE3Q5JUK9 113 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 TMEM26Q6ZUK4 368 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 LYSMD3Q7Z3D4 306 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 PAF1Q8N7H5 531 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 GKN1Q9NS71 199 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 A0A1W2PPW3 197 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 MROH6A6NGR9 719 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 GOLGA8CPA6NN73 597 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 OAZ2O95190 189 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 SNAP29O95721 258 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 GOT2P00505 430 aaKnown RBP16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 FASP25445 335 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 CA8P35219 290 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 RPS24P62847 133 aaKnown RBP16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 ZNF235Q14590 738 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 SLC36A3Q495N2 470 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 LRRC8DQ7L1W4 858 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 C16orf59Q7L2K0 433 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 MFSD2AQ8NA29 543 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 FNDC8Q8TC99 324 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 MAGEE2Q8TD90 523 aaPredicted RBP16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 MYRFLQ96LU7 910 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 SEPHS2Q99611 448 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 TRMOQ9BU70 441 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 C1orf50Q9BV19 199 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 ARNT2Q9HBZ2 717 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 FAM50BQ9Y247 325 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 TRPM7Q96QT4 1865 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 A0A087WXM4 84 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 RPS6KA2Q15349 733 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 NEDD8Q15843 81 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 FGD3Q5JSP0 725 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 TBPL2Q6SJ96 375 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 TMCO2Q7Z6W1 182 aaPredicted RBP16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 CXorf21Q9HAI6 301 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 CIDEBQ9UHD4 219 aa16.16■□□□□ 0.18
NKX3-1-201ENST00000380871 TDRD15B5MCY1 1934 aaKnown RBP16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 CLOCKO15516 846 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 NBNO60934 754 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 CLASP2O75122 1294 aaKnown RBP16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 CAPN15O75808 1086 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 EOMESO95936 686 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 INHAP05111 366 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 HNRNPCP07910 306 aaKnown RBP eCLIP16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 ZNF37AP17032 561 aaPredicted RBP16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 IL10P22301 178 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 GSK3BP49841 420 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 ATP4BP51164 291 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 INPP5AQ14642 412 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 PTPRRQ15256 657 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 ATP6AP1Q15904 470 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 KCTD21Q4G0X4 260 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 INTS11Q5TA45 600 aaKnown RBP16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 ZUFSPQ96AP4 578 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 BIRC8Q96P09 236 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 MFSD1Q9H3U5 465 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 SLC52A3Q9NQ40 469 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 TLR8Q9NR97 1041 aaKnown RBP16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 SRRDQ9UH36 339 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 UBA6A0AVT1 1052 aaPredicted RBP16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 MTMR11A4FU01 709 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 ENPP3O14638 875 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 MUSKO15146 869 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 SLC7A4O43246 635 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 ATXN1LP0C7T5 689 aaKnown RBP16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 SLC2A3P11169 496 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 RHOQP17081 205 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 EEF1DP29692 281 aaKnown RBP16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 AGTR2P50052 363 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 RAB39AQ14964 217 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 TAF12Q16514 161 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 ZBED5Q49AG3 693 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 HABP4Q5JVS0 413 aaKnown RBP16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 LCN8Q6JVE9 175 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 FUT10Q6P4F1 479 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 XKR5Q6UX68 686 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 OSBPL6Q9BZF3 934 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 POLR1BQ9H9Y6 1135 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 ACTR3BQ9P1U1 418 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 EVLQ9UI08 416 aaPredicted RBP16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 PCDHA9Q9Y5H5 950 aa16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 MKI67P46013 3256 aaKnown RBP16.15■□□□□ 0.18
NKX3-1-201ENST00000380871 CCDC162PA2VCL2 907 aa16.14■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms