RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 ZC3H13Q5T200 1668 aaKnown RBP11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 RFXANKO14593 260 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 AHCYL1O43865 530 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 RECQL4O94761 1208 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 C22orf31O95567 290 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 C9P02748 559 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 AHCYP23526 432 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 DNAJB7Q7Z6W7 309 aaPredicted RBP11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 BPIFB6Q8NFQ5 453 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 ADAMTS15Q8TE58 950 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 AKAP11Q9UKA4 1901 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 ELK3P41970 407 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 INHBEP58166 350 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 SPIN3Q5JUX0 258 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 ABHD13Q7L211 337 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 TCP10LQ8TDR4 215 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 EHD1Q9H4M9 534 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 PACSIN3Q9UKS6 424 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 ERVK-7P63135 1459 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 GPR75-ASB3A0A0A6YYF3 556 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 TNFRSF10BO14763 440 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 SCUBE3Q8IX30 993 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 KBTBD2Q8IY47 623 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 GPATCH1Q9BRR8 931 aaKnown RBP11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 POLR2AP24928 1970 aaKnown RBP11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 GRK6P43250 576 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 CDK16Q00536 496 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 RASGRP3Q8IV61 690 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 A0A0A0MRY4 1105 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 LACTBL1A8MY62 500 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 PER2O15055 1255 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 WDR93Q6P2C0 686 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 POMZP3Q6PJE2 187 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 SPATA13Q96N96 652 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 CXCL11O14625 94 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 GLUD2P49448 558 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 SAMD14Q8IZD0 417 aaPredicted RBP11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 DENND1AQ8TEH3 1009 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 KAT2AQ92830 837 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 KIAA1143Q96AT1 154 aaPredicted RBP11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 POP1Q99575 1024 aaKnown RBP11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 FUT8Q9BYC5 575 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 MED11Q9P086 117 aa11.18□□□□□ -0.62
PTCHD1-201ENST00000379361 A0A1W2PQ67 120 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 KANTRA0A1W2PQU2 76 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 GYPCP04921 128 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 CYP2R1Q6VVX0 501 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 HDAC7Q8WUI4 952 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 CDH3P22223 829 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 ACVR2AP27037 513 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 TSGA10IPQ3SY00 556 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 GPRC5CQ9NQ84 441 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 ALOX5P09917 674 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 PTX3P26022 381 aaPredicted RBP11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 FXR1P51114 621 aaKnown RBP eCLIP11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 IRGCQ6NXR0 463 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 OSBPL11Q9BXB4 747 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 OR12D3Q9UGF7 316 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 PEX12O00623 359 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 ZNF823P16415 610 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 PSMB4P28070 264 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 TLR1Q15399 786 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 FAM131AQ6UXB0 335 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 REM2Q8IYK8 340 aaPredicted RBP11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 MYO19Q96H55 970 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 ZNF471Q9BX82 626 aaPredicted RBP11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 LGR4Q9BXB1 951 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 PRNPP04156 253 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 ABL2P42684 1182 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 CTSKP43235 329 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 SNTA1Q13424 505 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 SLC30A8Q8IWU4 369 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 ZNF709Q8N972 641 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 OR4C15Q8NGM1 316 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 CPT1CQ8TCG5 803 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 TRPM4Q8TD43 1214 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 KLHL6Q8WZ60 621 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 ZSWIM3Q96MP5 696 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 SEMA3CQ99985 751 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 SGK2Q9HBY8 427 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 MEIS2O14770 477 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 CXCL14O95715 111 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 COPS8Q99627 209 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 CDH19Q9H159 772 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 PNPLA3Q9NST1 481 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 GPATCH2LQ9NWQ4 482 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 SIRPGQ9P1W8 387 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 KLK7P49862 253 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 KCTD5Q9NXV2 234 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 CNTNAP5Q8WYK1 1306 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 FADS2P1A8MWK0 482 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 CLEC10AQ8IUN9 316 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 PDPRQ8NCN5 879 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 KCNK4Q9NYG8 393 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 OR6C75A6NL08 312 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 FOXN3O00409 490 aaPredicted RBP11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 FOXN1O15353 648 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 VAPBO95292 243 aa11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 HOXB9P17482 250 aaPredicted RBP11.17□□□□□ -0.62
PTCHD1-201ENST00000379361 CTSOP43234 321 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms