RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 YIPF1Q9Y548 306 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 PPEF2O14830 753 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 PAGE1O75459 146 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 SEC24AO95486 1093 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 GALK1P51570 392 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 ATP13A5Q4VNC0 1218 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 ZNF776Q68DI1 518 aaPredicted RBP10.77□□□□□ -0.69
HIF3A-205ENST00000377670 CWF19L1Q69YN2 538 aaKnown RBP10.77□□□□□ -0.69
HIF3A-205ENST00000377670 RFWD3Q6PCD5 774 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 FAM151BQ6UXP7 276 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 XYLT1Q86Y38 959 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 CAMK1DQ8IU85 385 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 CYP4Z2PQ8N1L4 340 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 ZNF276Q8N554 614 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 METTL6Q8TCB7 284 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 HPS1Q92902 700 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 KLHL5Q96PQ7 755 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 GKN1Q9NS71 199 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 SPEF2Q9C093 1822 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 TPP1O14773 563 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 DDX3YO15523 660 aaKnown RBP10.77□□□□□ -0.69
HIF3A-205ENST00000377670 COL6A1P12109 1028 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 NELFEP18615 380 aaKnown RBP10.77□□□□□ -0.69
HIF3A-205ENST00000377670 PURAQ00577 322 aaKnown RBP10.77□□□□□ -0.69
HIF3A-205ENST00000377670 TCEAL5Q5H9L2 206 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 CASP12Q6UXS9 341 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 ZNF852Q6ZMS4 543 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 ZNF605Q86T29 641 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 MREGQ8N565 214 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 SLC4A11Q8NBS3 891 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 HLA-CQ95604 372 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 ACAT2Q9BWD1 397 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 EPB41L1Q9H4G0 881 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 FAM220BPB1ANY3 271 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 PAPSS1O43252 624 aaPredicted RBP10.76□□□□□ -0.69
HIF3A-205ENST00000377670 CRABP2P29373 138 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 GRIA3P42263 894 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 PDX1P52945 283 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 SRP54P61011 504 aaKnown RBP10.76□□□□□ -0.69
HIF3A-205ENST00000377670 TAB1Q15750 504 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 AKIRIN2Q53H80 203 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 C17orf64Q86WR6 236 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 KRT73Q86Y46 540 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.76□□□□□ -0.69
HIF3A-205ENST00000377670 HEBP2Q9Y5Z4 205 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 ATXN2Q99700 1313 aaKnown RBP10.76□□□□□ -0.69
HIF3A-205ENST00000377670 MYL12BO14950 172 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 GALNT3Q14435 633 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 LPAL2Q16609 132 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 SH3D19Q5HYK7 790 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 SPANXN3Q5MJ09 141 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 BROXQ5VW32 411 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 BHLHB9Q6PI77 547 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 POLNQ7Z5Q5 900 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 ALYREFQ86V81 257 aaKnown RBP10.76□□□□□ -0.69
HIF3A-205ENST00000377670 AVL9Q8NBF6 648 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 SLC25A23Q9BV35 468 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 SRMSQ9H3Y6 488 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 INTS10Q9NVR2 710 aaKnown RBP10.76□□□□□ -0.69
HIF3A-205ENST00000377670 COPS7AQ9UBW8 275 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 NUP188Q5SRE5 1749 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 MYBPHLA2RUH7 354 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 BTN3A3O00478 584 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 COX4I1P13073 169 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 GNPDA1P46926 289 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 GJA9P57773 515 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 ARSJQ5FYB0 599 aaPredicted RBP10.76□□□□□ -0.69
HIF3A-205ENST00000377670 CHST15Q7LFX5 561 aaPredicted RBP10.76□□□□□ -0.69
HIF3A-205ENST00000377670 PARP8Q8N3A8 854 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 TMEM130Q8N3G9 435 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 BRINP2Q9C0B6 783 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 ABCB8Q9NUT2 735 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 TNPO3Q9Y5L0 923 aaKnown RBP10.76□□□□□ -0.69
HIF3A-205ENST00000377670 HMGB3O15347 200 aaKnown RBP10.76□□□□□ -0.69
HIF3A-205ENST00000377670 CBFA2T3O75081 653 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 PIGNO95427 931 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 PLGP00747 810 aaPredicted RBP10.76□□□□□ -0.69
HIF3A-205ENST00000377670 TTKP33981 857 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 RPL14P50914 215 aaKnown RBP10.76□□□□□ -0.69
HIF3A-205ENST00000377670 GBE1Q04446 702 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 PUS10Q3MIT2 529 aaKnown RBP10.76□□□□□ -0.69
HIF3A-205ENST00000377670 SLC39A4Q6P5W5 647 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 KYAT3Q6YP21 454 aaKnown RBP10.76□□□□□ -0.69
HIF3A-205ENST00000377670 FAM126BQ8IXS8 530 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 EIF1ADQ8N9N8 165 aaKnown RBP10.76□□□□□ -0.69
HIF3A-205ENST00000377670 A0A1B0GVM2 712 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 TCAF2A6NFQ2 919 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 LRCH4O75427 683 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 ERAL1O75616 437 aaKnown RBP10.76□□□□□ -0.69
HIF3A-205ENST00000377670 TSPAN19P0C672 248 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 VAV1P15498 845 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 STXBP5Q5T5C0 1151 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 ABRAXAS1Q6UWZ7 409 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 TPRG1Q6ZUI0 275 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 Q8N9G6 341 aaPredicted RBP10.76□□□□□ -0.69
HIF3A-205ENST00000377670 EMID1Q96A84 441 aaPredicted RBP10.76□□□□□ -0.69
HIF3A-205ENST00000377670 NACC2Q96BF6 587 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 C3orf14Q9HBI5 128 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 CDH7Q9ULB5 785 aa10.76□□□□□ -0.69
HIF3A-205ENST00000377670 ZFP37Q9Y6Q3 630 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms