RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 TSGA13Q96PP4 275 aa19■□□□□ 0.63
CBWD3-204ENST00000377349 GEMIN8Q9NWZ8 242 aaKnown RBP19■□□□□ 0.63
CBWD3-204ENST00000377349 KCNK4Q9NYG8 393 aa19■□□□□ 0.63
CBWD3-204ENST00000377349 C1orf232A0A0U1RR37 186 aa19■□□□□ 0.63
CBWD3-204ENST00000377349 ARHGAP6O43182 974 aa19■□□□□ 0.63
CBWD3-204ENST00000377349 ZW10O43264 779 aa19■□□□□ 0.63
CBWD3-204ENST00000377349 ZBTB17Q13105 803 aa19■□□□□ 0.63
CBWD3-204ENST00000377349 GALNT3Q14435 633 aa19■□□□□ 0.63
CBWD3-204ENST00000377349 TMEM71Q6P5X7 295 aa19■□□□□ 0.63
CBWD3-204ENST00000377349 ATG14Q6ZNE5 492 aa19■□□□□ 0.63
CBWD3-204ENST00000377349 PLD5Q8N7P1 536 aa19■□□□□ 0.63
CBWD3-204ENST00000377349 WDR24Q96S15 920 aa19■□□□□ 0.63
CBWD3-204ENST00000377349 SPRY4Q9C004 299 aa19■□□□□ 0.63
CBWD3-204ENST00000377349 CNOT6Q9ULM6 557 aaKnown RBP19■□□□□ 0.63
CBWD3-204ENST00000377349 OAS3Q9Y6K5 1087 aaKnown RBP19■□□□□ 0.63
CBWD3-204ENST00000377349 B4E171 279 aa18.99■□□□□ 0.63
CBWD3-204ENST00000377349 DNAJC6O75061 913 aa18.99■□□□□ 0.63
CBWD3-204ENST00000377349 CLDN7O95471 211 aa18.99■□□□□ 0.63
CBWD3-204ENST00000377349 ASMTLO95671 621 aa18.99■□□□□ 0.63
CBWD3-204ENST00000377349 SFTPCP11686 197 aa18.99■□□□□ 0.63
CBWD3-204ENST00000377349 ZNF30P17039 623 aa18.99■□□□□ 0.63
CBWD3-204ENST00000377349 CES1P23141 567 aa18.99■□□□□ 0.63
CBWD3-204ENST00000377349 TSPAN7P41732 249 aa18.99■□□□□ 0.63
CBWD3-204ENST00000377349 ATP1A2P50993 1020 aa18.99■□□□□ 0.63
CBWD3-204ENST00000377349 GPLD1P80108 840 aa18.99■□□□□ 0.63
CBWD3-204ENST00000377349 PEX6Q13608 980 aa18.99■□□□□ 0.63
CBWD3-204ENST00000377349 PCSK7Q16549 785 aa18.99■□□□□ 0.63
CBWD3-204ENST00000377349 KAZNQ674X7 775 aa18.99■□□□□ 0.63
CBWD3-204ENST00000377349 RHOT1Q8IXI2 618 aa18.99■□□□□ 0.63
CBWD3-204ENST00000377349 ARRDC2Q8TBH0 407 aa18.99■□□□□ 0.63
CBWD3-204ENST00000377349 AGAP3Q96P47 875 aa18.99■□□□□ 0.63
CBWD3-204ENST00000377349 DPYSL5Q9BPU6 564 aa18.99■□□□□ 0.63
CBWD3-204ENST00000377349 RIOK2Q9BVS4 552 aaKnown RBP18.99■□□□□ 0.63
CBWD3-204ENST00000377349 ZMYND15Q9H091 742 aa18.99■□□□□ 0.63
CBWD3-204ENST00000377349 SLC25A18Q9H1K4 315 aa18.99■□□□□ 0.63
CBWD3-204ENST00000377349 TRBV23OR9-2A0A075B6M9 112 aa18.98■□□□□ 0.63
CBWD3-204ENST00000377349 A6NCN8 305 aa18.98■□□□□ 0.63
CBWD3-204ENST00000377349 PPP1R12AO14974 1030 aaPredicted RBP18.98■□□□□ 0.63
CBWD3-204ENST00000377349 COMTP21964 271 aa18.98■□□□□ 0.63
CBWD3-204ENST00000377349 CSTF2P33240 577 aaKnown RBP eCLIP18.98■□□□□ 0.63
CBWD3-204ENST00000377349 PPIDQ08752 370 aaKnown RBP18.98■□□□□ 0.63
CBWD3-204ENST00000377349 LRP8Q14114 963 aa18.98■□□□□ 0.63
CBWD3-204ENST00000377349 ANKS6Q68DC2 871 aa18.98■□□□□ 0.63
CBWD3-204ENST00000377349 GOLPH3Q9H4A6 298 aa18.98■□□□□ 0.63
CBWD3-204ENST00000377349 SLC39A1Q9NY26 324 aa18.98■□□□□ 0.63
CBWD3-204ENST00000377349 AMACRQ9UHK6 382 aa18.98■□□□□ 0.63
CBWD3-204ENST00000377349 PILRAQ9UKJ1 303 aa18.98■□□□□ 0.63
CBWD3-204ENST00000377349 EFCAB7A8K855 629 aa18.97■□□□□ 0.63
CBWD3-204ENST00000377349 PPFIA2O75334 1257 aa18.97■□□□□ 0.63
CBWD3-204ENST00000377349 MAGEA1P43355 309 aa18.97■□□□□ 0.63
CBWD3-204ENST00000377349 PDK1Q15118 436 aa18.97■□□□□ 0.63
CBWD3-204ENST00000377349 ARHGAP22Q7Z5H3 698 aa18.97■□□□□ 0.63
CBWD3-204ENST00000377349 GALNT13Q8IUC8 556 aa18.97■□□□□ 0.63
CBWD3-204ENST00000377349 CCDC50Q8IVM0 306 aa18.97■□□□□ 0.63
CBWD3-204ENST00000377349 NRSN1Q8IZ57 195 aa18.97■□□□□ 0.63
CBWD3-204ENST00000377349 CACNA2D3Q8IZS8 1091 aa18.97■□□□□ 0.63
CBWD3-204ENST00000377349 IL22RA1Q8N6P7 574 aa18.97■□□□□ 0.63
CBWD3-204ENST00000377349 CCDC112Q8NEF3 446 aa18.97■□□□□ 0.63
CBWD3-204ENST00000377349 EXD1Q8NHP7 514 aa18.97■□□□□ 0.63
CBWD3-204ENST00000377349 FATE1Q969F0 183 aa18.97■□□□□ 0.63
CBWD3-204ENST00000377349 RTP4Q96DX8 246 aa18.97■□□□□ 0.63
CBWD3-204ENST00000377349 LYSMD1Q96S90 227 aa18.97■□□□□ 0.63
CBWD3-204ENST00000377349 DDX56Q9NY93 547 aaKnown RBP18.97■□□□□ 0.63
CBWD3-204ENST00000377349 VPS18Q9P253 973 aa18.97■□□□□ 0.63
CBWD3-204ENST00000377349 DNPEPQ9ULA0 475 aa18.97■□□□□ 0.63
CBWD3-204ENST00000377349 TFR2Q9UP52 801 aa18.97■□□□□ 0.63
CBWD3-204ENST00000377349 PRKAB1Q9Y478 270 aa18.97■□□□□ 0.63
CBWD3-204ENST00000377349 USP9XQ93008 2570 aaPredicted RBP18.97■□□□□ 0.63
CBWD3-204ENST00000377349 NBPF19A0A087WUL8 3843 aa18.97■□□□□ 0.63
CBWD3-204ENST00000377349 C3orf70A6NLC5 250 aaPredicted RBP18.96■□□□□ 0.63
CBWD3-204ENST00000377349 RAD1O60671 282 aa18.96■□□□□ 0.63
CBWD3-204ENST00000377349 MTA2O94776 668 aa18.96■□□□□ 0.63
CBWD3-204ENST00000377349 ATP1A1P05023 1023 aaKnown RBP18.96■□□□□ 0.63
CBWD3-204ENST00000377349 PIRTP0C851 137 aa18.96■□□□□ 0.63
CBWD3-204ENST00000377349 ZFXP17010 805 aaPredicted RBP18.96■□□□□ 0.63
CBWD3-204ENST00000377349 SLC1A1P43005 524 aa18.96■□□□□ 0.63
CBWD3-204ENST00000377349 ALS2CLQ60I27 953 aa18.96■□□□□ 0.63
CBWD3-204ENST00000377349 SLC9A4Q6AI14 798 aa18.96■□□□□ 0.63
CBWD3-204ENST00000377349 BORAQ6PGQ7 559 aa18.96■□□□□ 0.63
CBWD3-204ENST00000377349 MFSD7Q6UXD7 560 aa18.96■□□□□ 0.63
CBWD3-204ENST00000377349 FAM129CQ86XR2 697 aa18.96■□□□□ 0.63
CBWD3-204ENST00000377349 SLC38A3Q99624 504 aa18.96■□□□□ 0.63
CBWD3-204ENST00000377349 MLPHQ9BV36 600 aaPredicted RBP18.96■□□□□ 0.63
CBWD3-204ENST00000377349 ADGRE3Q9BY15 652 aa18.96■□□□□ 0.63
CBWD3-204ENST00000377349 ASPSCR1Q9BZE9 553 aa18.96■□□□□ 0.63
CBWD3-204ENST00000377349 ADNPQ9H2P0 1102 aa18.96■□□□□ 0.63
CBWD3-204ENST00000377349 TBC1D29Q9UFV1 150 aa18.96■□□□□ 0.63
CBWD3-204ENST00000377349 SPTAN1Q13813 2472 aaKnown RBP18.96■□□□□ 0.63
CBWD3-204ENST00000377349 RP1L1Q8IWN7 2480 aaPredicted RBP18.95■□□□□ 0.62
CBWD3-204ENST00000377349 FADS2P1A8MWK0 482 aa18.95■□□□□ 0.62
CBWD3-204ENST00000377349 F5H423 210 aaPredicted RBP18.95■□□□□ 0.62
CBWD3-204ENST00000377349 PYGLP06737 847 aa18.95■□□□□ 0.62
CBWD3-204ENST00000377349 MMP2P08253 660 aa18.95■□□□□ 0.62
CBWD3-204ENST00000377349 POLE2P56282 527 aa18.95■□□□□ 0.62
CBWD3-204ENST00000377349 RAB15P59190 212 aa18.95■□□□□ 0.62
CBWD3-204ENST00000377349 IFI35P80217 286 aaPredicted RBP18.95■□□□□ 0.62
CBWD3-204ENST00000377349 TBX2Q13207 712 aaPredicted RBP18.95■□□□□ 0.62
CBWD3-204ENST00000377349 SPA17Q15506 151 aa18.95■□□□□ 0.62
CBWD3-204ENST00000377349 QPCTQ16769 361 aa18.95■□□□□ 0.62
CBWD3-204ENST00000377349 DCAF12Q5T6F0 453 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms