RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 C12orf76Q8N812 135 aaPredicted RBP11.6□□□□□ -0.55
DDR1-227ENST00000376570 STAG3L4Q8TBR4 150 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 SPPL2BQ8TCT7 592 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 PTERQ96BW5 349 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 AURKBQ96GD4 344 aaPredicted RBP11.6□□□□□ -0.55
DDR1-227ENST00000376570 ZNF558Q96NG5 402 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 HAPLN3Q96S86 360 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 NSUN3Q9H649 340 aaKnown RBP11.6□□□□□ -0.55
DDR1-227ENST00000376570 MRPL17Q9NRX2 175 aaKnown RBP11.6□□□□□ -0.55
DDR1-227ENST00000376570 LNPEPQ9UIQ6 1025 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 DOLKQ9UPQ8 538 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 AP4S1Q9Y587 144 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 UNC80Q8N2C7 3258 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 NRP2O60462 931 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 FOXD2O60548 495 aaPredicted RBP11.6□□□□□ -0.55
DDR1-227ENST00000376570 RPP40O75818 363 aaKnown RBP11.6□□□□□ -0.55
DDR1-227ENST00000376570 SLC10A3P09131 477 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 APLP1P51693 650 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 LSM3P62310 102 aaKnown RBP11.6□□□□□ -0.55
DDR1-227ENST00000376570 ESRRGP62508 458 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 PHEXP78562 749 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 CLCQ05315 142 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 LAPTM5Q13571 262 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 PCBP1Q15365 356 aaKnown RBP eCLIP11.6□□□□□ -0.555e-10■■□□□ 14.1
DDR1-227ENST00000376570 CRTC3Q6UUV7 619 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 Q6ZVU0 165 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 TSPAN33Q86UF1 283 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 PKP2Q99959 881 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 KCTD14Q9BQ13 255 aaPredicted RBP11.6□□□□□ -0.55
DDR1-227ENST00000376570 PNPLA8Q9NP80 782 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 SH3BP4Q9P0V3 963 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 SPASTQ9UBP0 616 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 USP22Q9UPT9 525 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 CFAP20Q9Y6A4 193 aaKnown RBP11.6□□□□□ -0.55
DDR1-227ENST00000376570 AP4B1Q9Y6B7 739 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 LTBP1Q14766 1721 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 ECI2O75521 394 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 RGS4P49798 205 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 CEACAM7Q14002 265 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 OR4D1Q15615 310 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 TMC5Q6UXY8 1006 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 CILP2Q8IUL8 1156 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 PGBD5Q8N414 524 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 OR52B6Q8NGF0 335 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 C3orf30Q96M34 536 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 SYTL2Q9HCH5 934 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 PCDH12Q9NPG4 1184 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 BRWD1Q9NSI6 2320 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 ARVCFO00192 962 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 AP3B1O00203 1094 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 SEC24AO95486 1093 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 PKMP14618 531 aaKnown RBP11.59□□□□□ -0.55
DDR1-227ENST00000376570 ACTR3P61158 418 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 DEFB103AP81534 67 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 PRKG2Q13237 762 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 KRT33BQ14525 404 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 SEMA3AQ14563 771 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 AAK1Q2M2I8 961 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 CTC1Q2NKJ3 1217 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 TTC33Q6PID6 262 aaPredicted RBP11.59□□□□□ -0.55
DDR1-227ENST00000376570 SERPINA9Q86WD7 417 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 NPAS4Q8IUM7 802 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 HERC6Q8IVU3 1022 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 COLGALT2Q8IYK4 626 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 PQLC1Q8N2U9 271 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 RNF175Q8N4F7 328 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 CANT1Q8WVQ1 401 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 THAP11Q96EK4 314 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 DRC3Q9H069 523 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 OSBPL2Q9H1P3 480 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 SSU72Q9NP77 194 aaKnown RBP11.59□□□□□ -0.55
DDR1-227ENST00000376570 TMEM161AQ9NX61 479 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 PKD2L2Q9NZM6 624 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 YIPF1Q9Y548 306 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 LDB2O43679 373 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 ADAMTS4O75173 837 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 FKBP6O75344 327 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 SULT2A1Q06520 285 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 KRT72Q14CN4 511 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 REP15Q6BDI9 236 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 RETSATQ6NUM9 610 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 TMEM214Q6NUQ4 689 aaKnown RBP11.59□□□□□ -0.55
DDR1-227ENST00000376570 UGT3A1Q6NUS8 523 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 C16orf87Q6PH81 154 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 SYTL1Q8IYJ3 562 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 RNF168Q8IYW5 571 aaPredicted RBP11.59□□□□□ -0.55
DDR1-227ENST00000376570 FOXJ1Q92949 421 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 RELTQ969Z4 430 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 RTP4Q96DX8 246 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 PAWRQ96IZ0 340 aaKnown RBP11.59□□□□□ -0.55
DDR1-227ENST00000376570 ELOVL6Q9H5J4 265 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 A0A087X1B8 175 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 A0A0G2JN53 185 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 MATN2O00339 956 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 INPPL1O15357 1258 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 PRAMEF12O95522 483 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 ALDH1A1P00352 501 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 SOAT1P35610 550 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 UFM1P61960 85 aa11.59□□□□□ -0.55
DDR1-227ENST00000376570 MADCAM1Q13477 382 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms