RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 PKMP14618 531 aaKnown RBP8.99□□□□□ -0.97
UBR4-201ENST00000375218 PPP3CCP48454 512 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 KLHL40Q2TBA0 621 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 ARSJQ5FYB0 599 aaPredicted RBP8.99□□□□□ -0.97
UBR4-201ENST00000375218 CYP4Z1Q86W10 505 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 LRRC8AQ8IWT6 810 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 SP8Q8IXZ3 490 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 FNDC5Q8NAU1 212 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 CD300LFQ8TDQ1 290 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 NSMCE1Q8WV22 266 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 LINGO1Q96FE5 620 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 PERPQ96FX8 193 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 TINAGL1Q9GZM7 467 aaPredicted RBP8.99□□□□□ -0.97
UBR4-201ENST00000375218 XDHP47989 1333 aa8.99□□□□□ -0.97
UBR4-201ENST00000375218 ZNF716A6NP11 495 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 IQCF5A8MTL0 148 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 ITGAVP06756 1048 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 SLC10A3P09131 477 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 ZNF735P0CB33 412 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 ATP2A2P16615 1042 aaKnown RBP8.98□□□□□ -0.97
UBR4-201ENST00000375218 SLC1A1P43005 524 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 VAMP2P63027 116 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 MERTKQ12866 999 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 DCXRQ7Z4W1 244 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 PM20D2Q8IYS1 436 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 IFT43Q96FT9 208 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 NAA11Q9BSU3 229 aaPredicted RBP8.98□□□□□ -0.97
UBR4-201ENST00000375218 IMPG2Q9BZV3 1241 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 C12orf65Q9H3J6 166 aaKnown RBP8.98□□□□□ -0.97
UBR4-201ENST00000375218 SEMA6BQ9H3T3 888 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 LRRC40Q9H9A6 602 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 IL21RQ9HBE5 538 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 ZC4H2Q9NQZ6 224 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 PNPLA3Q9NST1 481 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 SH3BP4Q9P0V3 963 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 B4GALT6Q9UBX8 382 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 SNX7Q9UNH6 387 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 NPFFR2Q9Y5X5 522 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 VPS13AQ96RL7 3174 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 PLIN4Q96Q06 1357 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 GIPC1O14908 333 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 FANCGO15287 622 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 LRRTM2O43300 516 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 SPAG6O75602 509 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 FARP2O94887 1054 aaPredicted RBP8.98□□□□□ -0.97
UBR4-201ENST00000375218 HIBADHP31937 336 aaKnown RBP8.98□□□□□ -0.97
UBR4-201ENST00000375218 ENTPD1P49961 510 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 BCAR1P56945 870 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 TRADDQ15628 312 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 PAN2Q504Q3 1202 aaKnown RBP8.98□□□□□ -0.97
UBR4-201ENST00000375218 C3orf38Q5JPI3 329 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 KIAA0408Q6ZU52 694 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 ARMC10Q8N2F6 343 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 RAB3IL1Q8TBN0 382 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 NT5C3BQ969T7 300 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 PTCHD1Q96NR3 888 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 QRFPRQ96P65 431 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 SPATA16Q9BXB7 569 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 FZD1Q9UP38 647 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 HBS1LQ9Y450 684 aaKnown RBP8.98□□□□□ -0.97
UBR4-201ENST00000375218 CTAG2O75638 210 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 SCGB1D1O95968 90 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 STAG3L2P0CL84 134 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 CYP4B1P13584 511 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 CD79BP40259 229 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 SUMO1P63165 101 aaKnown RBP8.98□□□□□ -0.97
UBR4-201ENST00000375218 TCP11X2Q5H9J9 407 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.98□□□□□ -0.97
UBR4-201ENST00000375218 SCN4BQ8IWT1 228 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 KLHL36Q8N4N3 616 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 CA5BP1Q8WTZ4 195 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 VWCEQ96DN2 955 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 APIPQ96GX9 242 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 TMEM134Q9H6X4 195 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 CHODLQ9H9P2 273 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 VCX3AQ9NNX9 186 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 KCNH7Q9NS40 1196 aa8.98□□□□□ -0.97
UBR4-201ENST00000375218 O00370 1275 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 SMNDC1O75940 238 aaKnown RBP eCLIP8.97□□□□□ -0.97
UBR4-201ENST00000375218 NFKB1P19838 968 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 PGM1P36871 562 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 BMPR1AP36894 532 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 MLIPQ5VWP3 458 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 ANKS6Q68DC2 871 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 THSD4Q6ZMP0 1018 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 WDR88Q6ZMY6 472 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 GALNT4Q8N4A0 578 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 CCDC112Q8NEF3 446 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 OR4A15Q8NGL6 344 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 SCAMP5Q8TAC9 235 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 ELMO2Q96JJ3 720 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 SMOQ99835 787 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 HINT2Q9BX68 163 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 BCL2L14Q9BZR8 327 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 SAYSD1Q9NPB0 183 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 TRNAU1APQ9NX07 287 aaKnown RBP8.97□□□□□ -0.97
UBR4-201ENST00000375218 TRPC4Q9UBN4 977 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 H7C1D1 291 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 CTIFO43310 598 aaKnown RBP8.97□□□□□ -0.97
UBR4-201ENST00000375218 RNF224P0DH78 156 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms