RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 BCAP29Q9UHQ4 241 aa12.02□□□□□ -0.48
HMGCL-202ENST00000374487 RNF112Q9ULX5 631 aa12.02□□□□□ -0.48
HMGCL-202ENST00000374487 ATP6AP2A0A1C7CYW4 349 aa12.02□□□□□ -0.49
HMGCL-202ENST00000374487 H3BMM5 538 aa12.02□□□□□ -0.49
HMGCL-202ENST00000374487 PSMD12O00232 456 aaPredicted RBP12.02□□□□□ -0.49
HMGCL-202ENST00000374487 ATP6AP2O75787 350 aa12.02□□□□□ -0.49
HMGCL-202ENST00000374487 SIX3O95343 332 aaPredicted RBP12.02□□□□□ -0.49
HMGCL-202ENST00000374487 PYGLP06737 847 aa12.02□□□□□ -0.49
HMGCL-202ENST00000374487 MC4RP32245 332 aa12.02□□□□□ -0.49
HMGCL-202ENST00000374487 TTPAP49638 278 aa12.02□□□□□ -0.49
HMGCL-202ENST00000374487 PKNOX1P55347 436 aa12.02□□□□□ -0.49
HMGCL-202ENST00000374487 RHOAP61586 193 aa12.02□□□□□ -0.49
HMGCL-202ENST00000374487 NTHL1P78549 312 aa12.02□□□□□ -0.49
HMGCL-202ENST00000374487 SQLEQ14534 574 aa12.02□□□□□ -0.49
HMGCL-202ENST00000374487 PPP1R3AQ16821 1122 aa12.02□□□□□ -0.49
HMGCL-202ENST00000374487 ZRANB3Q5FWF4 1079 aa12.02□□□□□ -0.49
HMGCL-202ENST00000374487 ZNF783Q6ZMS7 281 aa12.02□□□□□ -0.49
HMGCL-202ENST00000374487 CHSY3Q70JA7 882 aa12.02□□□□□ -0.49
HMGCL-202ENST00000374487 USP13Q92995 863 aaPredicted RBP12.02□□□□□ -0.49
HMGCL-202ENST00000374487 BHMTQ93088 406 aa12.02□□□□□ -0.49
HMGCL-202ENST00000374487 FEM1AQ9BSK4 669 aa12.02□□□□□ -0.49
HMGCL-202ENST00000374487 VCX3BQ9H321 246 aa12.02□□□□□ -0.49
HMGCL-202ENST00000374487 BPIFA1Q9NP55 256 aa12.02□□□□□ -0.49
HMGCL-202ENST00000374487 MID1IP1Q9NPA3 183 aa12.02□□□□□ -0.49
HMGCL-202ENST00000374487 CCDC167Q9P0B6 97 aa12.02□□□□□ -0.49
HMGCL-202ENST00000374487 CCDC189A1A4V9 331 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 SUPT3HB4E1H0 165 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 NRG2O14511 850 aaPredicted RBP12.01□□□□□ -0.49
HMGCL-202ENST00000374487 SUPT3HO75486 399 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 MT-CO1P00395 513 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 F11P03951 625 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 MZF1P28698 734 aaPredicted RBP12.01□□□□□ -0.49
HMGCL-202ENST00000374487 CDKN1CP49918 316 aaPredicted RBP12.01□□□□□ -0.49
HMGCL-202ENST00000374487 THOP1P52888 689 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 INHBCP55103 352 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 ATP6V0D1P61421 351 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 MRPS35P82673 323 aaKnown RBP12.01□□□□□ -0.49
HMGCL-202ENST00000374487 CDH18Q13634 790 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 RAB33AQ14088 237 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 FLOT2Q14254 428 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 FASTKQ14296 549 aaKnown RBP12.01□□□□□ -0.49
HMGCL-202ENST00000374487 LRRC36Q1X8D7 754 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 AGKQ53H12 422 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 GK5Q6ZS86 529 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 KBTBD6Q86V97 674 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 KBTBD2Q8IY47 623 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 KIAA1191Q96A73 305 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 ZNF707Q96C28 371 aaPredicted RBP12.01□□□□□ -0.49
HMGCL-202ENST00000374487 C19orf60Q96EN9 201 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 DERL2Q9GZP9 239 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 HCFC1R1Q9NWW0 138 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 FKBPLQ9UIM3 349 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 SYCE1LA8MT33 242 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 CCL16O15467 120 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 KERAO60938 352 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 VPS26AO75436 327 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 HDCP19113 662 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 ME2P23368 584 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 MSX2P35548 267 aaPredicted RBP12.01□□□□□ -0.49
HMGCL-202ENST00000374487 STX1BP61266 288 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 SH3BP2P78314 561 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 TRAF2Q12933 501 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 SMAD4Q13485 552 aaKnown RBP12.01□□□□□ -0.49
HMGCL-202ENST00000374487 PABPC1LQ4VXU2 614 aaKnown RBP12.01□□□□□ -0.49
HMGCL-202ENST00000374487 INO80DQ53TQ3 878 aaPredicted RBP12.01□□□□□ -0.49
HMGCL-202ENST00000374487 PIGGQ5H8A4 983 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 IRGCQ6NXR0 463 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 NCEH1Q6PIU2 408 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 TAS2R42Q7RTR8 314 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 FBXO39Q8N4B4 442 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 NKAPQ8N5F7 415 aaKnown RBP12.01□□□□□ -0.49
HMGCL-202ENST00000374487 RNF148Q8N7C7 305 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 PAF1Q8N7H5 531 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 ARL14EPQ8N8R7 260 aaPredicted RBP12.01□□□□□ -0.49
HMGCL-202ENST00000374487 HJURPQ8NCD3 748 aaPredicted RBP12.01□□□□□ -0.49
HMGCL-202ENST00000374487 ATOH8Q96SQ7 321 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 GPR21Q99679 349 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 ECSITQ9BQ95 431 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.01□□□□□ -0.49
HMGCL-202ENST00000374487 ADA2Q9NZK5 511 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 HACD3Q9P035 362 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 STOML2Q9UJZ1 356 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 PKP3Q9Y446 797 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 PCDHB9Q9Y5E1 797 aa12.01□□□□□ -0.49
HMGCL-202ENST00000374487 BTN3A1O00481 513 aa12□□□□□ -0.49
HMGCL-202ENST00000374487 CDK14O94921 469 aa12□□□□□ -0.49
HMGCL-202ENST00000374487 LATS1O95835 1130 aa12□□□□□ -0.49
HMGCL-202ENST00000374487 CD160O95971 181 aa12□□□□□ -0.49
HMGCL-202ENST00000374487 MTHFD2P13995 350 aa12□□□□□ -0.49
HMGCL-202ENST00000374487 PKMP14618 531 aaKnown RBP12□□□□□ -0.49
HMGCL-202ENST00000374487 ARSAP15289 507 aa12□□□□□ -0.49
HMGCL-202ENST00000374487 CHRM3P20309 590 aa12□□□□□ -0.49
HMGCL-202ENST00000374487 PTK2BQ14289 1009 aa12□□□□□ -0.49
HMGCL-202ENST00000374487 PTPRRQ15256 657 aa12□□□□□ -0.49
HMGCL-202ENST00000374487 SMAD2Q15796 467 aaKnown RBP12□□□□□ -0.49
HMGCL-202ENST00000374487 ZNF423Q2M1K9 1284 aa12□□□□□ -0.49
HMGCL-202ENST00000374487 AARS2Q5JTZ9 985 aaKnown RBP12□□□□□ -0.49
HMGCL-202ENST00000374487 TXNDC8Q6A555 127 aa12□□□□□ -0.49
HMGCL-202ENST00000374487 PSAPL1Q6NUJ1 521 aa12□□□□□ -0.49
HMGCL-202ENST00000374487 ITIH5Q86UX2 942 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms