RNA–Protein interactions for RNA: ENST00000373608.7

COPS7B-203, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best) BASIC

Gene COPS7B, Length 2,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-203ENST00000373608 B3GALT6Q96L58 329 aa13.69□□□□□ -0.22
COPS7B-203ENST00000373608 TSEN34Q9BSV6 310 aaKnown RBP13.69□□□□□ -0.22
COPS7B-203ENST00000373608 CRISPLD1Q9H336 500 aa13.69□□□□□ -0.22
COPS7B-203ENST00000373608 SYTL2Q9HCH5 934 aa13.69□□□□□ -0.22
COPS7B-203ENST00000373608 CACNA2D2Q9NY47 1150 aa13.69□□□□□ -0.22
COPS7B-203ENST00000373608 PCDHGA7Q9Y5G6 932 aa13.69□□□□□ -0.22
COPS7B-203ENST00000373608 UBFD1O14562 309 aaKnown RBP13.68□□□□□ -0.22
COPS7B-203ENST00000373608 ACSL4O60488 711 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 SFTPCP11686 197 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 KCNC1P48547 511 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 CD97P48960 835 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 ACADVLP49748 655 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 STX1BP61266 288 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 PLOD1Q02809 727 aaPredicted RBP13.68□□□□□ -0.22
COPS7B-203ENST00000373608 GNA12Q03113 381 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 IL31Q6EBC2 164 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 ANKS3Q6ZW76 656 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 LARP4Q71RC2 724 aaKnown RBP eCLIP13.68□□□□□ -0.221e-9■■□□□ 13.9
COPS7B-203ENST00000373608 LRRC8DQ7L1W4 858 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 RNF148Q8N7C7 305 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 OR13C4Q8NGS5 318 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 C19orf60Q96EN9 201 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 DCUN1D1Q96GG9 259 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 DDX50Q9BQ39 737 aaKnown RBP13.68□□□□□ -0.22
COPS7B-203ENST00000373608 AARSD1Q9BTE6 412 aaKnown RBP13.68□□□□□ -0.22
COPS7B-203ENST00000373608 TTPALQ9BTX7 342 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 CINPQ9BW66 212 aaPredicted RBP13.68□□□□□ -0.22
COPS7B-203ENST00000373608 TFB2MQ9H5Q4 396 aaKnown RBP13.68□□□□□ -0.22
COPS7B-203ENST00000373608 MARCH5Q9NX47 278 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 RNF186Q9NXI6 227 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 CCDC167Q9P0B6 97 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 PFDN2Q9UHV9 154 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 ATPIF1Q9UII2 106 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 DNMT3LQ9UJW3 386 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 MRPS23Q9Y3D9 190 aaKnown RBP13.68□□□□□ -0.22
COPS7B-203ENST00000373608 SLC38A8A6NNN8 435 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 STX16-NPEPL1H3BU86 382 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 TBC1D4O60343 1298 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 GJB3O75712 270 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 BPNT1O95861 308 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 FGF4P08620 206 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 FUT4P22083 530 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 ATP5C1P36542 298 aaKnown RBP13.68□□□□□ -0.22
COPS7B-203ENST00000373608 SLC11A2P49281 568 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 CDH4P55283 916 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 FOLH1Q04609 750 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 DUSP4Q13115 394 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 TRIM25Q14258 630 aaKnown RBP13.68□□□□□ -0.22
COPS7B-203ENST00000373608 PPP1R3AQ16821 1122 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 LIN52Q52LA3 116 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 HACD2Q6Y1H2 254 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 RIN3Q8TB24 985 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 HMGCLL1Q8TB92 370 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 MYEOVQ96EZ4 313 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 CDKN2AIPNLQ96HQ2 116 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 CASD1Q96PB1 797 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 TRIB3Q96RU7 358 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 TTLL2Q9BWV7 592 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 SPAG4Q9NPE6 437 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 NLE1Q9NVX2 485 aaPredicted RBP13.68□□□□□ -0.22
COPS7B-203ENST00000373608 POLR3BQ9NW08 1133 aaPredicted RBP13.68□□□□□ -0.22
COPS7B-203ENST00000373608 UBA2Q9UBT2 640 aaPredicted RBP13.68□□□□□ -0.22
COPS7B-203ENST00000373608 RIMS3Q9UJD0 308 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 ZNF711Q9Y462 761 aa13.68□□□□□ -0.22
COPS7B-203ENST00000373608 TXNDC9O14530 226 aa13.67□□□□□ -0.22
COPS7B-203ENST00000373608 VNN2O95498 520 aa13.67□□□□□ -0.22
COPS7B-203ENST00000373608 HOXD9P28356 352 aaPredicted RBP13.67□□□□□ -0.22
COPS7B-203ENST00000373608 MSX2P35548 267 aaPredicted RBP13.67□□□□□ -0.22
COPS7B-203ENST00000373608 KCNQ1P51787 676 aa13.67□□□□□ -0.22
COPS7B-203ENST00000373608 GRM2Q14416 872 aa13.67□□□□□ -0.22
COPS7B-203ENST00000373608 SEMA3AQ14563 771 aa13.67□□□□□ -0.22
COPS7B-203ENST00000373608 CLEC6AQ6EIG7 209 aa13.67□□□□□ -0.22
COPS7B-203ENST00000373608 CFAP52Q8N1V2 620 aa13.67□□□□□ -0.22
COPS7B-203ENST00000373608 RYBPQ8N488 228 aaPredicted RBP13.67□□□□□ -0.22
COPS7B-203ENST00000373608 PTGR2Q8N8N7 351 aaPredicted RBP13.67□□□□□ -0.22
COPS7B-203ENST00000373608 STARD7Q9NQZ5 370 aa13.67□□□□□ -0.22
COPS7B-203ENST00000373608 ABT1Q9ULW3 272 aaKnown RBP13.67□□□□□ -0.22
COPS7B-203ENST00000373608 RAB26Q9ULW5 256 aa13.67□□□□□ -0.22
COPS7B-203ENST00000373608 A0A0D9SEW6 157 aa13.67□□□□□ -0.22
COPS7B-203ENST00000373608 A0A0J9YVX5 310 aa13.67□□□□□ -0.22
COPS7B-203ENST00000373608 PRSS51A0A1B0GVH4 220 aa13.67□□□□□ -0.22
COPS7B-203ENST00000373608 TRIM43BA6NCK2 446 aa13.67□□□□□ -0.22
COPS7B-203ENST00000373608 A6NCN8 305 aa13.67□□□□□ -0.22
COPS7B-203ENST00000373608 CAPN8A6NHC0 703 aa13.67□□□□□ -0.22
COPS7B-203ENST00000373608 DENRO43583 198 aaKnown RBP13.67□□□□□ -0.22
COPS7B-203ENST00000373608 NRP2O60462 931 aa13.67□□□□□ -0.22
COPS7B-203ENST00000373608 SELPP16109 830 aa13.67□□□□□ -0.22
COPS7B-203ENST00000373608 SLC11A1P49279 550 aa13.67□□□□□ -0.22
COPS7B-203ENST00000373608 HPCAP84074 193 aa13.67□□□□□ -0.22
COPS7B-203ENST00000373608 TIAL1Q01085 375 aaKnown RBP eCLIP13.67□□□□□ -0.22
COPS7B-203ENST00000373608 SP3Q02447 781 aa13.67□□□□□ -0.22
COPS7B-203ENST00000373608 TRAP1Q12931 704 aaKnown RBP13.67□□□□□ -0.22
COPS7B-203ENST00000373608 PDK3Q15120 406 aa13.67□□□□□ -0.22
COPS7B-203ENST00000373608 RTP2Q5QGT7 225 aa13.67□□□□□ -0.22
COPS7B-203ENST00000373608 AFTPHQ6ULP2 937 aa13.67□□□□□ -0.22
COPS7B-203ENST00000373608 RSPO2Q6UXX9 243 aaPredicted RBP13.67□□□□□ -0.22
COPS7B-203ENST00000373608 SPATA24Q86W54 205 aa13.67□□□□□ -0.22
COPS7B-203ENST00000373608 PCDH20Q8N6Y1 951 aaKnown RBP13.67□□□□□ -0.22
COPS7B-203ENST00000373608 PDZD8Q8NEN9 1154 aa13.67□□□□□ -0.22
COPS7B-203ENST00000373608 EXT2Q93063 718 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms