RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 K7ENP7 123 aa18.7■□□□□ 0.58
TMEM53-201ENST00000372235 DUX1O43812 170 aa18.7■□□□□ 0.58
TMEM53-201ENST00000372235 VEGFDO43915 354 aa18.7■□□□□ 0.58
TMEM53-201ENST00000372235 PPFIA2O75334 1257 aa18.7■□□□□ 0.58
TMEM53-201ENST00000372235 ATP1A1P05023 1023 aaKnown RBP18.7■□□□□ 0.58
TMEM53-201ENST00000372235 CD1CP29017 333 aa18.7■□□□□ 0.58
TMEM53-201ENST00000372235 EPHA4P54764 986 aa18.7■□□□□ 0.58
TMEM53-201ENST00000372235 HHEXQ03014 270 aa18.7■□□□□ 0.58
TMEM53-201ENST00000372235 CLN3Q13286 438 aa18.7■□□□□ 0.58
TMEM53-201ENST00000372235 ARHGAP40Q5TG30 622 aa18.7■□□□□ 0.58
TMEM53-201ENST00000372235 TMEM71Q6P5X7 295 aa18.7■□□□□ 0.58
TMEM53-201ENST00000372235 INO80CQ6PI98 192 aaPredicted RBP18.7■□□□□ 0.58
TMEM53-201ENST00000372235 KDELC2Q7Z4H8 507 aa18.7■□□□□ 0.58
TMEM53-201ENST00000372235 AGBL5Q8NDL9 886 aa18.7■□□□□ 0.58
TMEM53-201ENST00000372235 BRSK1Q8TDC3 778 aa18.7■□□□□ 0.58
TMEM53-201ENST00000372235 PTCD2Q8WV60 388 aaKnown RBP18.7■□□□□ 0.58
TMEM53-201ENST00000372235 GLYATL1Q969I3 302 aa18.7■□□□□ 0.58
TMEM53-201ENST00000372235 PPP1R2P1Q96PQ5 205 aa18.7■□□□□ 0.58
TMEM53-201ENST00000372235 FCRL5Q96RD9 977 aa18.7■□□□□ 0.58
TMEM53-201ENST00000372235 CEP41Q9BYV8 373 aa18.7■□□□□ 0.58
TMEM53-201ENST00000372235 HYOU1Q9Y4L1 999 aa18.7■□□□□ 0.58
TMEM53-201ENST00000372235 CELSR3Q9NYQ7 3312 aa18.7■□□□□ 0.58
TMEM53-201ENST00000372235 hCG_1818297A0A087WSY0 165 aa18.69■□□□□ 0.58
TMEM53-201ENST00000372235 IGHV1OR21-1A0A087WYE8 117 aa18.69■□□□□ 0.58
TMEM53-201ENST00000372235 FADS2P1A8MWK0 482 aa18.69■□□□□ 0.58
TMEM53-201ENST00000372235 PPM1DO15297 605 aa18.69■□□□□ 0.58
TMEM53-201ENST00000372235 KCNJ13O60928 360 aa18.69■□□□□ 0.58
TMEM53-201ENST00000372235 MT-CYBP00156 380 aaPredicted RBP18.69■□□□□ 0.58
TMEM53-201ENST00000372235 F3P13726 295 aa18.69■□□□□ 0.58
TMEM53-201ENST00000372235 HOXB3P14651 431 aaPredicted RBP18.69■□□□□ 0.58
TMEM53-201ENST00000372235 VCLP18206 1134 aa18.69■□□□□ 0.58
TMEM53-201ENST00000372235 HLA-DPA1P20036 260 aa18.69■□□□□ 0.58
TMEM53-201ENST00000372235 CSTF2P33240 577 aaKnown RBP eCLIP18.69■□□□□ 0.58
TMEM53-201ENST00000372235 HMGCLP35914 325 aa18.69■□□□□ 0.58
TMEM53-201ENST00000372235 PPM1FP49593 454 aaPredicted RBP18.69■□□□□ 0.58
TMEM53-201ENST00000372235 MPP3Q13368 585 aa18.69■□□□□ 0.58
TMEM53-201ENST00000372235 COL9A2Q14055 689 aaPredicted RBP18.69■□□□□ 0.58
TMEM53-201ENST00000372235 TAF1BQ53T94 588 aaPredicted RBP18.69■□□□□ 0.58
TMEM53-201ENST00000372235 CCDC181Q5TID7 509 aa18.69■□□□□ 0.58
TMEM53-201ENST00000372235 IYDQ6PHW0 289 aa18.69■□□□□ 0.58
TMEM53-201ENST00000372235 WDR74Q6RFH5 385 aaPredicted RBP18.69■□□□□ 0.58
TMEM53-201ENST00000372235 USP53Q70EK8 1073 aa18.69■□□□□ 0.58
TMEM53-201ENST00000372235 PID1Q7Z2X4 250 aa18.69■□□□□ 0.58
TMEM53-201ENST00000372235 SFTPA2Q8IWL1 248 aa18.69■□□□□ 0.58
TMEM53-201ENST00000372235 SLC37A2Q8TED4 501 aa18.69■□□□□ 0.58
TMEM53-201ENST00000372235 HTR3CQ8WXA8 447 aa18.69■□□□□ 0.58
TMEM53-201ENST00000372235 LRRC45Q96CN5 670 aa18.69■□□□□ 0.58
TMEM53-201ENST00000372235 VPS35Q96QK1 796 aa18.69■□□□□ 0.58
TMEM53-201ENST00000372235 SEMA6CQ9H3T2 930 aa18.69■□□□□ 0.58
TMEM53-201ENST00000372235 RDH14Q9HBH5 336 aa18.69■□□□□ 0.58
TMEM53-201ENST00000372235 CPNE5Q9HCH3 593 aa18.69■□□□□ 0.58
TMEM53-201ENST00000372235 SHOC2Q9UQ13 582 aa18.69■□□□□ 0.58
TMEM53-201ENST00000372235 ST14Q9Y5Y6 855 aa18.69■□□□□ 0.58
TMEM53-201ENST00000372235 IGHV5-10-1A0A0J9YXX1 117 aa18.68■□□□□ 0.58
TMEM53-201ENST00000372235 LOC285095A0A1B0GVY8 99 aa18.68■□□□□ 0.58
TMEM53-201ENST00000372235 CCDC66A2RUB6 948 aa18.68■□□□□ 0.58
TMEM53-201ENST00000372235 BTNL10A8MVZ5 291 aa18.68■□□□□ 0.58
TMEM53-201ENST00000372235 APOC4-APOC2K7ER74 178 aa18.68■□□□□ 0.58
TMEM53-201ENST00000372235 KMOO15229 486 aa18.68■□□□□ 0.58
TMEM53-201ENST00000372235 CASC3O15234 703 aaKnown RBP18.68■□□□□ 0.58
TMEM53-201ENST00000372235 PMPCBO75439 489 aa18.68■□□□□ 0.58
TMEM53-201ENST00000372235 APOC2P02655 101 aa18.68■□□□□ 0.58
TMEM53-201ENST00000372235 ACP5P13686 325 aa18.68■□□□□ 0.58
TMEM53-201ENST00000372235 NAP1L1P55209 391 aaKnown RBP18.68■□□□□ 0.58
TMEM53-201ENST00000372235 GTF2H3Q13889 308 aa18.68■□□□□ 0.58
TMEM53-201ENST00000372235 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.68■□□□□ 0.58
TMEM53-201ENST00000372235 ITPRIPL1Q6GPH6 555 aa18.68■□□□□ 0.58
TMEM53-201ENST00000372235 XKR5Q6UX68 686 aa18.68■□□□□ 0.58
TMEM53-201ENST00000372235 ZC3H18Q86VM9 953 aaKnown RBP18.68■□□□□ 0.58
TMEM53-201ENST00000372235 ZSCAN1Q8NBB4 408 aa18.68■□□□□ 0.58
TMEM53-201ENST00000372235 GPR26Q8NDV2 337 aa18.68■□□□□ 0.58
TMEM53-201ENST00000372235 SPATA22Q8NHS9 363 aa18.68■□□□□ 0.58
TMEM53-201ENST00000372235 PATE1Q8WXA2 126 aa18.68■□□□□ 0.58
TMEM53-201ENST00000372235 HAUS1Q96CS2 278 aa18.68■□□□□ 0.58
TMEM53-201ENST00000372235 BBC3Q96PG8 261 aaPredicted RBP18.68■□□□□ 0.58
TMEM53-201ENST00000372235 TAAR9Q96RI9 348 aa18.68■□□□□ 0.58
TMEM53-201ENST00000372235 FSD1LQ9BXM9 530 aa18.68■□□□□ 0.58
TMEM53-201ENST00000372235 ASPSCR1Q9BZE9 553 aa18.68■□□□□ 0.58
TMEM53-201ENST00000372235 ZCCHC2Q9C0B9 1178 aaKnown RBP18.68■□□□□ 0.58
TMEM53-201ENST00000372235 ATXN10Q9UBB4 475 aa18.68■□□□□ 0.58
TMEM53-201ENST00000372235 PLEKHM1Q9Y4G2 1056 aa18.68■□□□□ 0.58
TMEM53-201ENST00000372235 EPN1Q9Y6I3 576 aaPredicted RBP18.68■□□□□ 0.58
TMEM53-201ENST00000372235 OAS3Q9Y6K5 1087 aaKnown RBP18.68■□□□□ 0.58
TMEM53-201ENST00000372235 ARHGEF17Q96PE2 2063 aaPredicted RBP18.67■□□□□ 0.58
TMEM53-201ENST00000372235 CHUKO15111 745 aa18.67■□□□□ 0.58
TMEM53-201ENST00000372235 ANXA9O76027 345 aa18.67■□□□□ 0.58
TMEM53-201ENST00000372235 STK10O94804 968 aaKnown RBP18.67■□□□□ 0.58
TMEM53-201ENST00000372235 NDUFA10O95299 355 aa18.67■□□□□ 0.58
TMEM53-201ENST00000372235 HGFP14210 728 aa18.67■□□□□ 0.58
TMEM53-201ENST00000372235 CTNNA2P26232 953 aa18.67■□□□□ 0.58
TMEM53-201ENST00000372235 MAPK10P53779 464 aa18.67■□□□□ 0.58
TMEM53-201ENST00000372235 RAB15P59190 212 aa18.67■□□□□ 0.58
TMEM53-201ENST00000372235 WASHC5Q12768 1159 aa18.67■□□□□ 0.58
TMEM53-201ENST00000372235 ALS2CLQ60I27 953 aa18.67■□□□□ 0.58
TMEM53-201ENST00000372235 BBS12Q6ZW61 710 aa18.67■□□□□ 0.58
TMEM53-201ENST00000372235 LRRTM4Q86VH4 590 aa18.67■□□□□ 0.58
TMEM53-201ENST00000372235 USP7Q93009 1102 aa18.67■□□□□ 0.58
TMEM53-201ENST00000372235 EID2BQ96D98 161 aa18.67■□□□□ 0.58
TMEM53-201ENST00000372235 CCDC74BQ96LY2 380 aa18.67■□□□□ 0.58
TMEM53-201ENST00000372235 TTC25Q96NG3 672 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms